RNA–Protein interactions for RNA: ENST00000342203.7

SSX2IP-201, Transcript of SSX family member 2 interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX2IP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-201ENST00000342203 C6orf50Q9HD87 102 aa13.87□□□□□ -0.19
SSX2IP-201ENST00000342203 GNAQP50148 359 aa13.86□□□□□ -0.19
SSX2IP-201ENST00000342203 USP49Q70CQ1 688 aa13.86□□□□□ -0.19
SSX2IP-201ENST00000342203 TEX11Q8IYF3 940 aa13.86□□□□□ -0.19
SSX2IP-201ENST00000342203 GPKOWQ92917 476 aaPredicted RBP eCLIP13.86□□□□□ -0.193e-7■■■□□ 17.5
SSX2IP-201ENST00000342203 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.86□□□□□ -0.19
SSX2IP-201ENST00000342203 CDK12Q9NYV4 1490 aaPredicted RBP13.86□□□□□ -0.19
SSX2IP-201ENST00000342203 RGS16O15492 202 aaPredicted RBP13.86□□□□□ -0.19
SSX2IP-201ENST00000342203 TBCAO75347 108 aaKnown RBP13.86□□□□□ -0.19
SSX2IP-201ENST00000342203 PTPREP23469 700 aa13.86□□□□□ -0.19
SSX2IP-201ENST00000342203 CETN2P41208 172 aa13.86□□□□□ -0.19
SSX2IP-201ENST00000342203 ZCRB1Q8TBF4 217 aaKnown RBP13.86□□□□□ -0.19
SSX2IP-201ENST00000342203 STMN4Q9H169 189 aaPredicted RBP13.86□□□□□ -0.19
SSX2IP-201ENST00000342203 SH3TC1Q8TE82 1336 aa13.86□□□□□ -0.19
SSX2IP-201ENST00000342203 TNRQ92752 1358 aa13.86□□□□□ -0.19
SSX2IP-201ENST00000342203 FAM133BQ5BKY9 247 aaKnown RBP13.86□□□□□ -0.19
SSX2IP-201ENST00000342203 RBM28Q9NW13 759 aaKnown RBP13.86□□□□□ -0.19
SSX2IP-201ENST00000342203 ABCB4P21439 1286 aa13.86□□□□□ -0.19
SSX2IP-201ENST00000342203 GUCY1A3Q02108 690 aa13.86□□□□□ -0.19
SSX2IP-201ENST00000342203 LLGL1Q15334 1064 aa13.86□□□□□ -0.19
SSX2IP-201ENST00000342203 RBM43Q6ZSC3 357 aaKnown RBP13.86□□□□□ -0.19
SSX2IP-201ENST00000342203 TTC26A0AVF1 554 aa13.86□□□□□ -0.19
SSX2IP-201ENST00000342203 CTNND1O60716 968 aaKnown RBP13.86□□□□□ -0.19
SSX2IP-201ENST00000342203 PHKA1P46020 1223 aa13.86□□□□□ -0.19
SSX2IP-201ENST00000342203 POLR2FP61218 127 aaKnown RBP13.86□□□□□ -0.19
SSX2IP-201ENST00000342203 BEND6Q5SZJ8 279 aaPredicted RBP13.86□□□□□ -0.19
SSX2IP-201ENST00000342203 HOOK3Q86VS8 718 aa13.86□□□□□ -0.19
SSX2IP-201ENST00000342203 LRRC27Q9C0I9 530 aa13.86□□□□□ -0.19
SSX2IP-201ENST00000342203 NOVA2Q9UNW9 492 aaKnown RBP13.86□□□□□ -0.19
SSX2IP-201ENST00000342203 PRKAB2O43741 272 aa13.85□□□□□ -0.19
SSX2IP-201ENST00000342203 CDC27P30260 824 aa13.85□□□□□ -0.19
SSX2IP-201ENST00000342203 EIF4A3P38919 411 aaKnown RBP13.85□□□□□ -0.19
SSX2IP-201ENST00000342203 COL9A3Q14050 684 aaPredicted RBP13.85□□□□□ -0.19
SSX2IP-201ENST00000342203 SMCR8Q8TEV9 937 aaPredicted RBP13.85□□□□□ -0.19
SSX2IP-201ENST00000342203 NKIRAS1Q9NYS0 192 aa13.85□□□□□ -0.19
SSX2IP-201ENST00000342203 SLC8A1P32418 973 aa13.85□□□□□ -0.19
SSX2IP-201ENST00000342203 CORO7P57737 925 aa13.85□□□□□ -0.19
SSX2IP-201ENST00000342203 MXRA7P84157 204 aa13.85□□□□□ -0.19
SSX2IP-201ENST00000342203 HERC4Q5GLZ8 1057 aaPredicted RBP13.85□□□□□ -0.19
SSX2IP-201ENST00000342203 TBC1D5Q92609 795 aa13.85□□□□□ -0.19
SSX2IP-201ENST00000342203 SRPRBQ9Y5M8 271 aaKnown RBP13.85□□□□□ -0.19
SSX2IP-201ENST00000342203 ARHGEF40Q8TER5 1519 aa13.85□□□□□ -0.19
SSX2IP-201ENST00000342203 SH2B2O14492 632 aaPredicted RBP13.85□□□□□ -0.19
SSX2IP-201ENST00000342203 DZIP3Q86Y13 1208 aaKnown RBP13.85□□□□□ -0.19
SSX2IP-201ENST00000342203 OXER1Q8TDS5 423 aa13.85□□□□□ -0.19
SSX2IP-201ENST00000342203 FOXP1Q9H334 677 aaPredicted RBP13.85□□□□□ -0.19
SSX2IP-201ENST00000342203 MLXIPQ9HAP2 919 aa13.85□□□□□ -0.19
SSX2IP-201ENST00000342203 CDC42BPAQ5VT25 1732 aa13.85□□□□□ -0.19
SSX2IP-201ENST00000342203 FDPSP14324 419 aaKnown RBP13.85□□□□□ -0.19
SSX2IP-201ENST00000342203 PLS1Q14651 629 aa13.85□□□□□ -0.19
SSX2IP-201ENST00000342203 LRRC31Q6UY01 552 aa13.85□□□□□ -0.19
SSX2IP-201ENST00000342203 KRT26Q7Z3Y9 468 aa13.85□□□□□ -0.19
SSX2IP-201ENST00000342203 CCDC77Q9BR77 488 aa13.85□□□□□ -0.19
SSX2IP-201ENST00000342203 LSM14BQ9BX40 385 aaKnown RBP13.85□□□□□ -0.19
SSX2IP-201ENST00000342203 CTNNA2P26232 953 aa13.84□□□□□ -0.19
SSX2IP-201ENST00000342203 TBC1D1Q86TI0 1168 aaPredicted RBP13.84□□□□□ -0.19
SSX2IP-201ENST00000342203 SPATA5Q8NB90 893 aa13.84□□□□□ -0.19
SSX2IP-201ENST00000342203 STIM2Q9P246 746 aa13.84□□□□□ -0.19
SSX2IP-201ENST00000342203 SALL3Q9BXA9 1300 aa13.84□□□□□ -0.19
SSX2IP-201ENST00000342203 ADCY1Q08828 1119 aa13.84□□□□□ -0.19
SSX2IP-201ENST00000342203 CETN1Q12798 172 aa13.84□□□□□ -0.19
SSX2IP-201ENST00000342203 TARBP1Q13395 1621 aaKnown RBP13.84□□□□□ -0.19
SSX2IP-201ENST00000342203 MAP3K4Q9Y6R4 1608 aa13.84□□□□□ -0.19
SSX2IP-201ENST00000342203 MROH7-TTC4A0A0A0MT08 1334 aa13.84□□□□□ -0.19
SSX2IP-201ENST00000342203 NCK2O43639 380 aa13.84□□□□□ -0.19
SSX2IP-201ENST00000342203 ACTN4O43707 911 aaKnown RBP13.84□□□□□ -0.19
SSX2IP-201ENST00000342203 TCP11X2Q5H9J9 407 aa13.84□□□□□ -0.19
SSX2IP-201ENST00000342203 LMNTD2Q8IXW0 634 aa13.84□□□□□ -0.19
SSX2IP-201ENST00000342203 ORAI2Q96SN7 254 aa13.84□□□□□ -0.19
SSX2IP-201ENST00000342203 ATP8A1Q9Y2Q0 1164 aa13.84□□□□□ -0.19
SSX2IP-201ENST00000342203 IRAK1P51617 712 aa13.84□□□□□ -0.19
SSX2IP-201ENST00000342203 ZKSCAN8Q15776 578 aaPredicted RBP13.84□□□□□ -0.19
SSX2IP-201ENST00000342203 DENND2CQ68D51 928 aa13.84□□□□□ -0.19
SSX2IP-201ENST00000342203 NFRKBQ6P4R8 1299 aa13.84□□□□□ -0.19
SSX2IP-201ENST00000342203 TSKSQ9UJT2 592 aa13.84□□□□□ -0.19
SSX2IP-201ENST00000342203 MYO1FO00160 1098 aa13.84□□□□□ -0.19
SSX2IP-201ENST00000342203 IFNAR1P17181 557 aa13.84□□□□□ -0.19
SSX2IP-201ENST00000342203 ARID4AP29374 1257 aaPredicted RBP13.84□□□□□ -0.19
SSX2IP-201ENST00000342203 TECP42680 631 aa13.84□□□□□ -0.19
SSX2IP-201ENST00000342203 RBM5P52756 815 aaKnown RBP eCLIP13.84□□□□□ -0.19
SSX2IP-201ENST00000342203 CUL4BQ13620 913 aa13.84□□□□□ -0.19
SSX2IP-201ENST00000342203 SNX29Q8TEQ0 813 aa13.84□□□□□ -0.19
SSX2IP-201ENST00000342203 TRIM7Q9C029 511 aa13.84□□□□□ -0.19
SSX2IP-201ENST00000342203 PSD3Q9NYI0 1048 aa13.84□□□□□ -0.19
SSX2IP-201ENST00000342203 ABCA8O94911 1581 aa13.84□□□□□ -0.19
SSX2IP-201ENST00000342203 FMNL1O95466 1100 aaPredicted RBP13.83□□□□□ -0.19
SSX2IP-201ENST00000342203 SESN3P58005 492 aa13.83□□□□□ -0.19
SSX2IP-201ENST00000342203 AP1ARQ63HQ0 302 aa13.83□□□□□ -0.19
SSX2IP-201ENST00000342203 ARHGEF2Q92974 986 aaKnown RBP13.83□□□□□ -0.19
SSX2IP-201ENST00000342203 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.83□□□□□ -0.191e-8■■■■■ 107.1
SSX2IP-201ENST00000342203 SMARCAL1Q9NZC9 954 aa13.83□□□□□ -0.19
SSX2IP-201ENST00000342203 USP17L12C9JPN9 530 aa13.83□□□□□ -0.2
SSX2IP-201ENST00000342203 USP17L21D6R901 530 aa13.83□□□□□ -0.2
SSX2IP-201ENST00000342203 TSGA10IPQ3SY00 556 aa13.83□□□□□ -0.2
SSX2IP-201ENST00000342203 CCDC152Q4G0S7 254 aa13.83□□□□□ -0.2
SSX2IP-201ENST00000342203 L1RE1Q9UN81 338 aa13.83□□□□□ -0.2
SSX2IP-201ENST00000342203 SLCO1A2P46721 670 aa13.83□□□□□ -0.2
SSX2IP-201ENST00000342203 TRIM65Q6PJ69 517 aa13.83□□□□□ -0.2
SSX2IP-201ENST00000342203 PACS2Q86VP3 889 aa13.83□□□□□ -0.2
SSX2IP-201ENST00000342203 LRRIQ3A6PVS8 624 aaPredicted RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms