RNA–Protein interactions for RNA: ENST00000341594.9

SYNE1-201, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNE1, Length 26,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-201ENST00000341594 TMEM63CQ9P1W3 806 aa3.92□□□□□ -1.78
SYNE1-201ENST00000341594 DAAM1Q9Y4D1 1078 aa3.92□□□□□ -1.78
SYNE1-201ENST00000341594 SBF2Q86WG5 1849 aa3.92□□□□□ -1.78
SYNE1-201ENST00000341594 CCDC194A0A1B0GVG4 234 aa3.92□□□□□ -1.78
SYNE1-201ENST00000341594 PCP4L1A6NKN8 68 aa3.92□□□□□ -1.78
SYNE1-201ENST00000341594 FGFR1OPO95684 399 aaKnown RBP3.92□□□□□ -1.78
SYNE1-201ENST00000341594 DEUP1Q05D60 604 aa3.92□□□□□ -1.78
SYNE1-201ENST00000341594 TAOK3Q9H2K8 898 aa3.92□□□□□ -1.78
SYNE1-201ENST00000341594 DACT1Q9NYF0 836 aa3.92□□□□□ -1.78
SYNE1-201ENST00000341594 TSPYL4Q9UJ04 414 aa3.92□□□□□ -1.78
SYNE1-201ENST00000341594 APLP1P51693 650 aa3.92□□□□□ -1.78
SYNE1-201ENST00000341594 HLTFQ14527 1009 aaKnown RBP eCLIP3.92□□□□□ -1.78
SYNE1-201ENST00000341594 GNPTABQ3T906 1256 aa3.92□□□□□ -1.78
SYNE1-201ENST00000341594 RRAGBQ5VZM2 374 aa3.92□□□□□ -1.78
SYNE1-201ENST00000341594 LARP1Q6PKG0 1096 aaKnown RBP3.92□□□□□ -1.78
SYNE1-201ENST00000341594 VEZTQ9HBM0 779 aa3.92□□□□□ -1.78
SYNE1-201ENST00000341594 BMP2KQ9NSY1 1161 aaPredicted RBP3.92□□□□□ -1.78
SYNE1-201ENST00000341594 AMOTQ4VCS5 1084 aa3.92□□□□□ -1.78
SYNE1-201ENST00000341594 ACRBPQ8NEB7 543 aa3.92□□□□□ -1.78
SYNE1-201ENST00000341594 PBXIP1Q96AQ6 731 aa3.92□□□□□ -1.78
SYNE1-201ENST00000341594 PPP1R36Q96LQ0 422 aa3.92□□□□□ -1.78
SYNE1-201ENST00000341594 CPLX1O14810 134 aa3.92□□□□□ -1.78
SYNE1-201ENST00000341594 IKBKBO14920 756 aa3.92□□□□□ -1.78
SYNE1-201ENST00000341594 HSPA6P17066 643 aa3.92□□□□□ -1.78
SYNE1-201ENST00000341594 MDH1BQ5I0G3 518 aa3.92□□□□□ -1.78
SYNE1-201ENST00000341594 LRRN4Q8WUT4 740 aa3.92□□□□□ -1.78
SYNE1-201ENST00000341594 RIN2Q8WYP3 895 aaPredicted RBP3.92□□□□□ -1.78
SYNE1-201ENST00000341594 AK5Q9Y6K8 562 aa3.92□□□□□ -1.78
SYNE1-201ENST00000341594 PPP1R16BQ96T49 567 aa3.92□□□□□ -1.78
SYNE1-201ENST00000341594 PFDN1O60925 122 aa3.92□□□□□ -1.78
SYNE1-201ENST00000341594 CCDC122Q5T0U0 273 aa3.92□□□□□ -1.78
SYNE1-201ENST00000341594 USP26Q9BXU7 913 aa3.92□□□□□ -1.78
SYNE1-201ENST00000341594 CTNNA3Q9UI47 895 aa3.92□□□□□ -1.78
SYNE1-201ENST00000341594 GCOM1H8Y6P7 765 aaPredicted RBP3.92□□□□□ -1.78
SYNE1-201ENST00000341594 PRDM1O75626 825 aa3.92□□□□□ -1.78
SYNE1-201ENST00000341594 MYZAPP0CAP1 466 aa3.92□□□□□ -1.78
SYNE1-201ENST00000341594 PTH1RQ03431 593 aa3.92□□□□□ -1.78
SYNE1-201ENST00000341594 PRKAB1Q9Y478 270 aa3.92□□□□□ -1.78
SYNE1-201ENST00000341594 GSTA2P09210 222 aa3.92□□□□□ -1.78
SYNE1-201ENST00000341594 RUFY3Q7L099 469 aa3.92□□□□□ -1.78
SYNE1-201ENST00000341594 FAM71BQ8TC56 605 aa3.92□□□□□ -1.78
SYNE1-201ENST00000341594 EVC2Q86UK5 1308 aa3.92□□□□□ -1.78
SYNE1-201ENST00000341594 BUB1O43683 1085 aa3.92□□□□□ -1.78
SYNE1-201ENST00000341594 ZBED4O75132 1171 aa3.92□□□□□ -1.78
SYNE1-201ENST00000341594 PRLRP16471 622 aa3.92□□□□□ -1.78
SYNE1-201ENST00000341594 SYNE4Q8N205 404 aa3.92□□□□□ -1.78
SYNE1-201ENST00000341594 OTUD6BQ8N6M0 293 aa3.92□□□□□ -1.78
SYNE1-201ENST00000341594 HOOK2Q96ED9 719 aa3.92□□□□□ -1.78
SYNE1-201ENST00000341594 RBM47A0AV96 593 aaKnown RBP3.92□□□□□ -1.78
SYNE1-201ENST00000341594 UBAP1LF5GYI3 381 aa3.92□□□□□ -1.78
SYNE1-201ENST00000341594 KINO60870 393 aaKnown RBP3.92□□□□□ -1.78
SYNE1-201ENST00000341594 CLTAP09496 248 aa3.92□□□□□ -1.78
SYNE1-201ENST00000341594 RILPL1Q5EBL4 403 aa3.92□□□□□ -1.78
SYNE1-201ENST00000341594 FBXO31Q5XUX0 539 aaPredicted RBP3.92□□□□□ -1.78
SYNE1-201ENST00000341594 OSBPL9Q96SU4 736 aa3.92□□□□□ -1.78
SYNE1-201ENST00000341594 HAUS8Q9BT25 410 aa3.92□□□□□ -1.78
SYNE1-201ENST00000341594 PHAXQ9H814 394 aaKnown RBP3.92□□□□□ -1.78
SYNE1-201ENST00000341594 TXKP42681 527 aa3.92□□□□□ -1.78
SYNE1-201ENST00000341594 FOXR2Q6PJQ5 311 aa3.92□□□□□ -1.78
SYNE1-201ENST00000341594 SMYD4Q8IYR2 804 aaPredicted RBP3.92□□□□□ -1.78
SYNE1-201ENST00000341594 NAT16Q8N8M0 369 aa3.92□□□□□ -1.78
SYNE1-201ENST00000341594 SMARCE1Q969G3 411 aa3.92□□□□□ -1.78
SYNE1-201ENST00000341594 IQCGQ9H095 443 aaKnown RBP3.92□□□□□ -1.78
SYNE1-201ENST00000341594 DBR1Q9UK59 544 aaKnown RBP3.92□□□□□ -1.78
SYNE1-201ENST00000341594 FOXN1O15353 648 aa3.91□□□□□ -1.78
SYNE1-201ENST00000341594 SMC1BQ8NDV3 1235 aa3.91□□□□□ -1.78
SYNE1-201ENST00000341594 FAM192AQ9GZU8 254 aa3.91□□□□□ -1.78
SYNE1-201ENST00000341594 PPCSQ9HAB8 311 aa3.91□□□□□ -1.78
SYNE1-201ENST00000341594 SLC52A1Q9NWF4 448 aa3.91□□□□□ -1.78
SYNE1-201ENST00000341594 RBMX2Q9Y388 322 aaKnown RBP3.91□□□□□ -1.78
SYNE1-201ENST00000341594 LSM1O15116 133 aaKnown RBP3.91□□□□□ -1.78
SYNE1-201ENST00000341594 MYL1P05976 194 aa3.91□□□□□ -1.78
SYNE1-201ENST00000341594 CORO7P57737 925 aa3.91□□□□□ -1.78
SYNE1-201ENST00000341594 PRR23CQ6ZRP0 262 aa3.91□□□□□ -1.78
SYNE1-201ENST00000341594 TRIM10Q9UDY6 481 aa3.91□□□□□ -1.78
SYNE1-201ENST00000341594 STX10O60499 249 aa3.91□□□□□ -1.78
SYNE1-201ENST00000341594 TNIP1Q15025 636 aa3.91□□□□□ -1.78
SYNE1-201ENST00000341594 A0A1W2PQ27 194 aa3.91□□□□□ -1.78
SYNE1-201ENST00000341594 A0A1W2PQ64 194 aa3.91□□□□□ -1.78
SYNE1-201ENST00000341594 A0A1W2PQD8 194 aa3.91□□□□□ -1.78
SYNE1-201ENST00000341594 RIPK1Q13546 671 aa3.91□□□□□ -1.78
SYNE1-201ENST00000341594 RRP36Q96EU6 259 aaKnown RBP3.91□□□□□ -1.78
SYNE1-201ENST00000341594 NALCNQ8IZF0 1738 aa3.91□□□□□ -1.78
SYNE1-201ENST00000341594 SPECC1L-ADORA2AF8WAN1 911 aa3.91□□□□□ -1.78
SYNE1-201ENST00000341594 PRKAR2BP31323 418 aa3.91□□□□□ -1.78
SYNE1-201ENST00000341594 ACAP1Q15027 740 aa3.91□□□□□ -1.78
SYNE1-201ENST00000341594 C10orf76Q5T2E6 689 aa3.91□□□□□ -1.78
SYNE1-201ENST00000341594 SPECC1LQ69YQ0 1117 aa3.91□□□□□ -1.78
SYNE1-201ENST00000341594 CYP2E1P05181 493 aaPredicted RBP3.91□□□□□ -1.78
SYNE1-201ENST00000341594 ATP6V1E1P36543 226 aa3.91□□□□□ -1.78
SYNE1-201ENST00000341594 CKAP4Q07065 602 aaKnown RBP3.91□□□□□ -1.78
SYNE1-201ENST00000341594 TRIM14Q14142 442 aa3.91□□□□□ -1.78
SYNE1-201ENST00000341594 PRPF31Q8WWY3 499 aaKnown RBP3.91□□□□□ -1.78
SYNE1-201ENST00000341594 FAM118BQ9BPY3 351 aa3.91□□□□□ -1.78
SYNE1-201ENST00000341594 IRX2Q9BZI1 471 aaPredicted RBP3.91□□□□□ -1.78
SYNE1-201ENST00000341594 TRIM6Q9C030 488 aaPredicted RBP3.91□□□□□ -1.78
SYNE1-201ENST00000341594 HSPA1AP0DMV8 641 aaKnown RBP3.91□□□□□ -1.78
SYNE1-201ENST00000341594 HSPA1BP0DMV9 641 aaKnown RBP3.91□□□□□ -1.78
SYNE1-201ENST00000341594 TXLNAP40222 546 aa3.91□□□□□ -1.78
SYNE1-201ENST00000341594 PSME1Q06323 249 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms