RNA–Protein interactions for RNA: ENST00000341165.10

NBR1-201, Transcript of NBR1, autophagy cargo receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NBR1, Length 4,656 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBR1-201ENST00000341165 TRMT44Q8IYL2 757 aaKnown RBP8.98□□□□□ -0.97
NBR1-201ENST00000341165 EYA3Q99504 573 aa8.98□□□□□ -0.97
NBR1-201ENST00000341165 TUBB2BQ9BVA1 445 aa8.98□□□□□ -0.97
NBR1-201ENST00000341165 CTNND2Q9UQB3 1225 aa8.98□□□□□ -0.97
NBR1-201ENST00000341165 FUT2Q10981 343 aa8.97□□□□□ -0.97
NBR1-201ENST00000341165 ORC2Q13416 577 aaPredicted RBP8.97□□□□□ -0.97
NBR1-201ENST00000341165 NONOQ15233 471 aaKnown RBP eCLIP8.97□□□□□ -0.97
NBR1-201ENST00000341165 ZNF827Q17R98 1081 aa8.97□□□□□ -0.97
NBR1-201ENST00000341165 HSP90AA4PQ58FG1 418 aa8.97□□□□□ -0.97
NBR1-201ENST00000341165 MAPKAPK5Q8IW41 473 aa8.97□□□□□ -0.97
NBR1-201ENST00000341165 PANX2Q96RD6 677 aa8.97□□□□□ -0.97
NBR1-201ENST00000341165 OGFRQ9NZT2 677 aa8.97□□□□□ -0.97
NBR1-201ENST00000341165 RWDD2AQ9UIY3 292 aa8.97□□□□□ -0.97
NBR1-201ENST00000341165 CICQ96RK0 1608 aaPredicted RBP8.97□□□□□ -0.97
NBR1-201ENST00000341165 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.97□□□□□ -0.97
NBR1-201ENST00000341165 RREB1Q92766 1687 aa8.97□□□□□ -0.97
NBR1-201ENST00000341165 BICDL2A1A5D9 508 aa8.97□□□□□ -0.97
NBR1-201ENST00000341165 USP27XA6NNY8 438 aa8.97□□□□□ -0.97
NBR1-201ENST00000341165 FOXN1O15353 648 aa8.97□□□□□ -0.97
NBR1-201ENST00000341165 STX17P56962 302 aa8.97□□□□□ -0.97
NBR1-201ENST00000341165 GNG11P61952 73 aa8.97□□□□□ -0.97
NBR1-201ENST00000341165 SLC4A8Q2Y0W8 1093 aa8.97□□□□□ -0.97
NBR1-201ENST00000341165 E4F1Q66K89 784 aaPredicted RBP8.97□□□□□ -0.97
NBR1-201ENST00000341165 GRAMD1CQ8IYS0 662 aa8.97□□□□□ -0.97
NBR1-201ENST00000341165 SH3RF3Q8TEJ3 882 aaPredicted RBP8.97□□□□□ -0.97
NBR1-201ENST00000341165 ZNHIT6Q9NWK9 470 aaKnown RBP8.97□□□□□ -0.97
NBR1-201ENST00000341165 PPP2R2CQ9Y2T4 447 aa8.97□□□□□ -0.97
NBR1-201ENST00000341165 NEBLO76041 1014 aa8.97□□□□□ -0.97
NBR1-201ENST00000341165 FGFR1OPO95684 399 aaKnown RBP8.97□□□□□ -0.97
NBR1-201ENST00000341165 MAP2K2P36507 400 aa8.97□□□□□ -0.97
NBR1-201ENST00000341165 LMAN1P49257 510 aa8.97□□□□□ -0.97
NBR1-201ENST00000341165 DPYDQ12882 1025 aa8.97□□□□□ -0.97
NBR1-201ENST00000341165 ZNF658Q5TYW1 1059 aaPredicted RBP8.97□□□□□ -0.97
NBR1-201ENST00000341165 FNBP4Q8N3X1 1017 aaPredicted RBP8.97□□□□□ -0.97
NBR1-201ENST00000341165 TSC1Q92574 1164 aa8.97□□□□□ -0.97
NBR1-201ENST00000341165 SAP30BPQ9UHR5 308 aaKnown RBP8.97□□□□□ -0.97
NBR1-201ENST00000341165 DDX60Q8IY21 1712 aaKnown RBP8.97□□□□□ -0.97
NBR1-201ENST00000341165 DUOX1Q9NRD9 1551 aa8.97□□□□□ -0.97
NBR1-201ENST00000341165 H7C1D1 291 aa8.96□□□□□ -0.97
NBR1-201ENST00000341165 NMT2O60551 498 aa8.96□□□□□ -0.97
NBR1-201ENST00000341165 KLRK1P26718 216 aa8.96□□□□□ -0.97
NBR1-201ENST00000341165 HOXA7P31268 230 aaPredicted RBP8.96□□□□□ -0.97
NBR1-201ENST00000341165 BIRC2Q13490 618 aa8.96□□□□□ -0.97
NBR1-201ENST00000341165 ARHGAP29Q52LW3 1261 aa8.96□□□□□ -0.97
NBR1-201ENST00000341165 DAGLBQ8NCG7 672 aa8.96□□□□□ -0.97
NBR1-201ENST00000341165 CCDC97Q96F63 343 aaPredicted RBP8.96□□□□□ -0.97
NBR1-201ENST00000341165 NUP88Q99567 741 aaPredicted RBP8.96□□□□□ -0.97
NBR1-201ENST00000341165 NRAPQ86VF7 1730 aa8.96□□□□□ -0.97
NBR1-201ENST00000341165 KLRF2D3W0D1 207 aa8.96□□□□□ -0.97
NBR1-201ENST00000341165 RPN1P04843 607 aaKnown RBP8.96□□□□□ -0.97
NBR1-201ENST00000341165 HLA-DOAP06340 250 aa8.96□□□□□ -0.97
NBR1-201ENST00000341165 SMARCA1P28370 1054 aa8.96□□□□□ -0.97
NBR1-201ENST00000341165 GRIN1Q05586 938 aa8.96□□□□□ -0.97
NBR1-201ENST00000341165 NCBP1Q09161 790 aaKnown RBP8.96□□□□□ -0.97
NBR1-201ENST00000341165 SF3B2Q13435 895 aaKnown RBP8.96□□□□□ -0.97
NBR1-201ENST00000341165 NFIXQ14938 502 aa8.96□□□□□ -0.97
NBR1-201ENST00000341165 UTP14CQ5TAP6 766 aaKnown RBP8.96□□□□□ -0.97
NBR1-201ENST00000341165 FOXP4Q8IVH2 680 aaPredicted RBP8.96□□□□□ -0.97
NBR1-201ENST00000341165 EXOC1Q9NV70 894 aa8.96□□□□□ -0.97
NBR1-201ENST00000341165 A0A1B0GTH6 734 aa8.96□□□□□ -0.98
NBR1-201ENST00000341165 MFSD14BQ5SR56 506 aa8.96□□□□□ -0.98
NBR1-201ENST00000341165 TMTC1Q8IUR5 882 aa8.96□□□□□ -0.98
NBR1-201ENST00000341165 NAP1L4Q99733 375 aaKnown RBP8.96□□□□□ -0.98
NBR1-201ENST00000341165 CD209Q9NNX6 404 aa8.96□□□□□ -0.98
NBR1-201ENST00000341165 ZNF215Q9UL58 517 aaPredicted RBP8.96□□□□□ -0.98
NBR1-201ENST00000341165 SERPINB2P05120 415 aa8.96□□□□□ -0.98
NBR1-201ENST00000341165 ZNF18P17022 549 aa8.96□□□□□ -0.98
NBR1-201ENST00000341165 SPATA20Q8TB22 786 aa8.96□□□□□ -0.98
NBR1-201ENST00000341165 NELFBQ8WX92 580 aa8.96□□□□□ -0.98
NBR1-201ENST00000341165 DPF2Q92785 391 aa8.96□□□□□ -0.98
NBR1-201ENST00000341165 SAMSN1Q9NSI8 373 aaKnown RBP8.96□□□□□ -0.98
NBR1-201ENST00000341165 BARHL2Q9NY43 387 aa8.96□□□□□ -0.98
NBR1-201ENST00000341165 TTF2Q9UNY4 1162 aaKnown RBP8.96□□□□□ -0.98
NBR1-201ENST00000341165 PRPHP41219 470 aa8.95□□□□□ -0.98
NBR1-201ENST00000341165 SH3RF1Q7Z6J0 888 aa8.95□□□□□ -0.98
NBR1-201ENST00000341165 GPKOWQ92917 476 aaPredicted RBP eCLIP8.95□□□□□ -0.98
NBR1-201ENST00000341165 DYNLL2Q96FJ2 89 aa8.95□□□□□ -0.98
NBR1-201ENST00000341165 PCMTD1Q96MG8 357 aaPredicted RBP8.95□□□□□ -0.98
NBR1-201ENST00000341165 SPZ1Q9BXG8 430 aa8.95□□□□□ -0.98
NBR1-201ENST00000341165 SUGT1Q9Y2Z0 365 aa8.95□□□□□ -0.98
NBR1-201ENST00000341165 CHD4Q14839 1912 aa8.95□□□□□ -0.98
NBR1-201ENST00000341165 COL1A1P02452 1464 aaPredicted RBP8.95□□□□□ -0.98
NBR1-201ENST00000341165 FMR1Q06787 632 aaKnown RBP eCLIP8.95□□□□□ -0.981e-6■■□□□ 14.1
NBR1-201ENST00000341165 NR1I3Q14994 352 aa8.95□□□□□ -0.98
NBR1-201ENST00000341165 SLC27A3Q5K4L6 730 aa8.95□□□□□ -0.98
NBR1-201ENST00000341165 CPLX3Q8WVH0 158 aa8.95□□□□□ -0.98
NBR1-201ENST00000341165 TRIM47Q96LD4 638 aa8.95□□□□□ -0.98
NBR1-201ENST00000341165 FAM205CA6NFA0 338 aa8.95□□□□□ -0.98
NBR1-201ENST00000341165 POTEB2H3BUK9 544 aa8.95□□□□□ -0.98
NBR1-201ENST00000341165 CDK8P49336 464 aa8.95□□□□□ -0.98
NBR1-201ENST00000341165 BMS1Q14692 1282 aaKnown RBP8.95□□□□□ -0.98
NBR1-201ENST00000341165 ENOX2Q16206 610 aaKnown RBP8.95□□□□□ -0.98
NBR1-201ENST00000341165 TMCO3Q6UWJ1 677 aa8.95□□□□□ -0.98
NBR1-201ENST00000341165 NEDD1Q8NHV4 660 aa8.95□□□□□ -0.98
NBR1-201ENST00000341165 TMEM47Q9BQJ4 181 aa8.95□□□□□ -0.98
NBR1-201ENST00000341165 GLT8D2Q9H1C3 349 aa8.95□□□□□ -0.98
NBR1-201ENST00000341165 DISC1Q9NRI5 854 aa8.95□□□□□ -0.98
NBR1-201ENST00000341165 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.95□□□□□ -0.98
NBR1-201ENST00000341165 SMCO2A6NFE2 343 aa8.95□□□□□ -0.98
NBR1-201ENST00000341165 TMEM232C9JQI7 657 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 113 ms