RNA–Protein interactions for RNA: ENST00000339948.3

ZNF648-201, Transcript of zinc finger protein 648, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF648, Length 3,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF648-201ENST00000339948 PPFIA4O75335 1185 aa12.98□□□□□ -0.33
ZNF648-201ENST00000339948 PUM3Q15397 648 aaKnown RBP12.98□□□□□ -0.33
ZNF648-201ENST00000339948 KLHL7Q8IXQ5 586 aa12.98□□□□□ -0.33
ZNF648-201ENST00000339948 MKRN1Q9UHC7 482 aaKnown RBP12.98□□□□□ -0.33
ZNF648-201ENST00000339948 DMGDHQ9UI17 866 aaKnown RBP12.98□□□□□ -0.33
ZNF648-201ENST00000339948 HPCAL4Q9UM19 191 aa12.98□□□□□ -0.33
ZNF648-201ENST00000339948 FAM169AQ9Y6X4 670 aa12.98□□□□□ -0.33
ZNF648-201ENST00000339948 XDHP47989 1333 aa12.98□□□□□ -0.33
ZNF648-201ENST00000339948 PDE2AO00408 941 aaPredicted RBP12.98□□□□□ -0.33
ZNF648-201ENST00000339948 HSF2BPO75031 334 aa12.98□□□□□ -0.33
ZNF648-201ENST00000339948 LIFRP42702 1097 aa12.98□□□□□ -0.33
ZNF648-201ENST00000339948 PAFAH1B1P43034 410 aa12.98□□□□□ -0.33
ZNF648-201ENST00000339948 LETM2Q2VYF4 491 aa12.98□□□□□ -0.33
ZNF648-201ENST00000339948 MS4A14Q96JA4 679 aa12.98□□□□□ -0.33
ZNF648-201ENST00000339948 SLC39A2Q9NP94 309 aa12.98□□□□□ -0.33
ZNF648-201ENST00000339948 MED4Q9NPJ6 270 aa12.98□□□□□ -0.33
ZNF648-201ENST00000339948 PPANQ9NQ55 473 aaKnown RBP12.98□□□□□ -0.33
ZNF648-201ENST00000339948 AATFQ9NY61 560 aaKnown RBP eCLIP12.98□□□□□ -0.33
ZNF648-201ENST00000339948 TBC1D7Q9P0N9 293 aa12.98□□□□□ -0.33
ZNF648-201ENST00000339948 PACSIN2Q9UNF0 486 aaPredicted RBP12.98□□□□□ -0.33
ZNF648-201ENST00000339948 RIPOR2Q9Y4F9 1068 aa12.98□□□□□ -0.33
ZNF648-201ENST00000339948 RCCD1A6NED2 376 aa12.98□□□□□ -0.33
ZNF648-201ENST00000339948 KRT14P02533 472 aa12.98□□□□□ -0.33
ZNF648-201ENST00000339948 SARSP49591 514 aaKnown RBP12.98□□□□□ -0.33
ZNF648-201ENST00000339948 KRT83P78385 493 aa12.98□□□□□ -0.33
ZNF648-201ENST00000339948 CKAP4Q07065 602 aaKnown RBP12.98□□□□□ -0.33
ZNF648-201ENST00000339948 CEP57Q86XR8 500 aa12.98□□□□□ -0.33
ZNF648-201ENST00000339948 OTUD6BQ8N6M0 293 aa12.98□□□□□ -0.33
ZNF648-201ENST00000339948 COG1Q8WTW3 980 aa12.98□□□□□ -0.33
ZNF648-201ENST00000339948 NHEJ1Q9H9Q4 299 aaPredicted RBP12.98□□□□□ -0.33
ZNF648-201ENST00000339948 ZBTB1Q9Y2K1 713 aa12.98□□□□□ -0.33
ZNF648-201ENST00000339948 ECM2O94769 699 aaPredicted RBP12.97□□□□□ -0.33
ZNF648-201ENST00000339948 IGHMBP2P38935 993 aaKnown RBP12.97□□□□□ -0.33
ZNF648-201ENST00000339948 RRAGAQ7L523 313 aa12.97□□□□□ -0.33
ZNF648-201ENST00000339948 ENAHQ8N8S7 591 aaPredicted RBP12.97□□□□□ -0.33
ZNF648-201ENST00000339948 MSANTD4Q8NCY6 345 aa12.97□□□□□ -0.33
ZNF648-201ENST00000339948 TUBGCP2Q9BSJ2 902 aa12.97□□□□□ -0.33
ZNF648-201ENST00000339948 IFIH1Q9BYX4 1025 aaKnown RBP12.97□□□□□ -0.33
ZNF648-201ENST00000339948 ADAMTS3O15072 1205 aa12.97□□□□□ -0.33
ZNF648-201ENST00000339948 USO1O60763 962 aaKnown RBP12.97□□□□□ -0.33
ZNF648-201ENST00000339948 TADA2BQ86TJ2 420 aa12.97□□□□□ -0.33
ZNF648-201ENST00000339948 SGMS1Q86VZ5 419 aa12.97□□□□□ -0.33
ZNF648-201ENST00000339948 DZIP3Q86Y13 1208 aaKnown RBP12.97□□□□□ -0.33
ZNF648-201ENST00000339948 LPIN2Q92539 896 aa12.97□□□□□ -0.33
ZNF648-201ENST00000339948 CCDC47Q96A33 483 aaKnown RBP12.97□□□□□ -0.33
ZNF648-201ENST00000339948 HAUS4Q9H6D7 363 aa12.97□□□□□ -0.33
ZNF648-201ENST00000339948 EXOC1Q9NV70 894 aa12.97□□□□□ -0.33
ZNF648-201ENST00000339948 ZSCAN5CA6NGD5 496 aaPredicted RBP12.96□□□□□ -0.33
ZNF648-201ENST00000339948 TACC1O75410 805 aa12.96□□□□□ -0.33
ZNF648-201ENST00000339948 PCCAP05165 728 aaPredicted RBP12.96□□□□□ -0.33
ZNF648-201ENST00000339948 CYP2D6P10635 497 aa12.96□□□□□ -0.33
ZNF648-201ENST00000339948 USP5P45974 858 aa12.96□□□□□ -0.33
ZNF648-201ENST00000339948 APBA1Q02410 837 aa12.96□□□□□ -0.33
ZNF648-201ENST00000339948 DTHD1Q6ZMT9 781 aa12.96□□□□□ -0.33
ZNF648-201ENST00000339948 CACNA1FO60840 1977 aa12.96□□□□□ -0.33
ZNF648-201ENST00000339948 SMIM23A6NLE4 172 aa12.96□□□□□ -0.33
ZNF648-201ENST00000339948 SYF2O95926 243 aaKnown RBP12.96□□□□□ -0.33
ZNF648-201ENST00000339948 C8orf74Q6P047 294 aa12.96□□□□□ -0.33
ZNF648-201ENST00000339948 NLRP10Q86W26 655 aa12.96□□□□□ -0.33
ZNF648-201ENST00000339948 DNAAF5Q86Y56 855 aa12.96□□□□□ -0.33
ZNF648-201ENST00000339948 MB21D1Q8N884 522 aa12.96□□□□□ -0.33
ZNF648-201ENST00000339948 REXO2Q9Y3B8 237 aaKnown RBP12.96□□□□□ -0.33
ZNF648-201ENST00000339948 FRMD3A2A2Y4 597 aa12.96□□□□□ -0.34
ZNF648-201ENST00000339948 RASSF7Q02833 373 aa12.96□□□□□ -0.34
ZNF648-201ENST00000339948 LRRC41Q15345 812 aa12.96□□□□□ -0.34
ZNF648-201ENST00000339948 ARL8AQ96BM9 186 aa12.96□□□□□ -0.34
ZNF648-201ENST00000339948 ZSCAN10Q96SZ4 725 aaPredicted RBP12.96□□□□□ -0.34
ZNF648-201ENST00000339948 UBXN6Q9BZV1 441 aa12.96□□□□□ -0.34
ZNF648-201ENST00000339948 HGSO14964 777 aaPredicted RBP12.95□□□□□ -0.34
ZNF648-201ENST00000339948 FTCDO95954 541 aa12.95□□□□□ -0.34
ZNF648-201ENST00000339948 HERVK_113P62684 666 aa12.95□□□□□ -0.34
ZNF648-201ENST00000339948 SMIM5Q71RC9 77 aa12.95□□□□□ -0.34
ZNF648-201ENST00000339948 TMTC2Q8N394 836 aa12.95□□□□□ -0.34
ZNF648-201ENST00000339948 ACSBG1Q96GR2 724 aa12.95□□□□□ -0.34
ZNF648-201ENST00000339948 CDK5RAP3Q96JB5 506 aa12.95□□□□□ -0.34
ZNF648-201ENST00000339948 CCDC43Q96MW1 224 aaKnown RBP12.95□□□□□ -0.34
ZNF648-201ENST00000339948 JPH2Q9BR39 696 aaPredicted RBP12.95□□□□□ -0.34
ZNF648-201ENST00000339948 TRIM31Q9BZY9 425 aa12.95□□□□□ -0.34
ZNF648-201ENST00000339948 TFCP2L1Q9NZI6 479 aa12.95□□□□□ -0.34
ZNF648-201ENST00000339948 RAB21Q9UL25 225 aa12.95□□□□□ -0.34
ZNF648-201ENST00000339948 MEGF6O75095 1541 aa12.95□□□□□ -0.34
ZNF648-201ENST00000339948 FCER1AP12319 257 aa12.95□□□□□ -0.34
ZNF648-201ENST00000339948 RDXP35241 583 aaKnown RBP12.95□□□□□ -0.34
ZNF648-201ENST00000339948 GUCY1A3Q02108 690 aa12.95□□□□□ -0.34
ZNF648-201ENST00000339948 GUCY2DQ02846 1103 aa12.95□□□□□ -0.34
ZNF648-201ENST00000339948 FERMT2Q96AC1 680 aa12.95□□□□□ -0.34
ZNF648-201ENST00000339948 NFU1Q9UMS0 254 aa12.95□□□□□ -0.34
ZNF648-201ENST00000339948 MYO1FO00160 1098 aa12.95□□□□□ -0.34
ZNF648-201ENST00000339948 NOP2P46087 812 aaKnown RBP12.95□□□□□ -0.34
ZNF648-201ENST00000339948 CFAP58Q5T655 872 aa12.95□□□□□ -0.34
ZNF648-201ENST00000339948 APTXQ7Z2E3 356 aaKnown RBP12.95□□□□□ -0.34
ZNF648-201ENST00000339948 CCDC155Q8N6L0 562 aa12.95□□□□□ -0.34
ZNF648-201ENST00000339948 HNRNPLLQ8WVV9 542 aaKnown RBP12.95□□□□□ -0.34
ZNF648-201ENST00000339948 CCDC51Q96ER9 411 aa12.95□□□□□ -0.34
ZNF648-201ENST00000339948 CNOT6LQ96LI5 555 aaKnown RBP12.95□□□□□ -0.34
ZNF648-201ENST00000339948 EFCC1Q9HA90 598 aa12.95□□□□□ -0.34
ZNF648-201ENST00000339948 FMN2Q9NZ56 1722 aa12.95□□□□□ -0.34
ZNF648-201ENST00000339948 GTPBP6O43824 516 aaPredicted RBP12.94□□□□□ -0.34
ZNF648-201ENST00000339948 MAGEA1P43355 309 aa12.94□□□□□ -0.34
ZNF648-201ENST00000339948 IRAK1P51617 712 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms