RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 CCAR1Q8IX12 1150 aaKnown RBP13.89□□□□□ -0.19
SPTLC1-202ENST00000337841 ANKRD13CQ8N6S4 541 aa13.89□□□□□ -0.19
SPTLC1-202ENST00000337841 BRF1Q92994 677 aa13.89□□□□□ -0.19
SPTLC1-202ENST00000337841 LZTS2Q9BRK4 669 aa13.89□□□□□ -0.19
SPTLC1-202ENST00000337841 R3HDMLQ9H3Y0 253 aa13.89□□□□□ -0.19
SPTLC1-202ENST00000337841 RBPJLQ9UBG7 517 aa13.89□□□□□ -0.19
SPTLC1-202ENST00000337841 LAMA4Q16363 1823 aa13.88□□□□□ -0.19
SPTLC1-202ENST00000337841 ATAD5Q96QE3 1844 aa13.88□□□□□ -0.19
SPTLC1-202ENST00000337841 KLF18A0A0U1RQI7 1052 aa13.88□□□□□ -0.19
SPTLC1-202ENST00000337841 PALM3A6NDB9 673 aaPredicted RBP13.88□□□□□ -0.19
SPTLC1-202ENST00000337841 KLRF2D3W0D1 207 aa13.88□□□□□ -0.19
SPTLC1-202ENST00000337841 VWA5AO00534 786 aa13.88□□□□□ -0.19
SPTLC1-202ENST00000337841 FOXN1O15353 648 aa13.88□□□□□ -0.19
SPTLC1-202ENST00000337841 ZBTB43O43298 467 aa13.88□□□□□ -0.19
SPTLC1-202ENST00000337841 FKTNO75072 461 aa13.88□□□□□ -0.19
SPTLC1-202ENST00000337841 GOLGA8HP0CJ92 632 aa13.88□□□□□ -0.19
SPTLC1-202ENST00000337841 BCRP11274 1271 aa13.88□□□□□ -0.19
SPTLC1-202ENST00000337841 SLC16A2P36021 539 aa13.88□□□□□ -0.19
SPTLC1-202ENST00000337841 CCNA1P78396 465 aa13.88□□□□□ -0.19
SPTLC1-202ENST00000337841 PPP2R5BQ15173 497 aa13.88□□□□□ -0.19
SPTLC1-202ENST00000337841 SYDE2Q5VT97 1194 aa13.88□□□□□ -0.19
SPTLC1-202ENST00000337841 TTBK2Q6IQ55 1244 aa13.88□□□□□ -0.19
SPTLC1-202ENST00000337841 FANCBQ8NB91 859 aa13.88□□□□□ -0.19
SPTLC1-202ENST00000337841 ATG4CQ96DT6 458 aa13.88□□□□□ -0.19
SPTLC1-202ENST00000337841 TBC1D32Q96NH3 1257 aa13.88□□□□□ -0.19
SPTLC1-202ENST00000337841 PAGR1Q9BTK6 254 aa13.88□□□□□ -0.19
SPTLC1-202ENST00000337841 AGXT2Q9BYV1 514 aa13.88□□□□□ -0.19
SPTLC1-202ENST00000337841 MORF4L1Q9UBU8 362 aa13.88□□□□□ -0.19
SPTLC1-202ENST00000337841 TSKSQ9UJT2 592 aa13.88□□□□□ -0.19
SPTLC1-202ENST00000337841 ADAMTS5Q9UNA0 930 aa13.88□□□□□ -0.19
SPTLC1-202ENST00000337841 MYH8P13535 1937 aa13.88□□□□□ -0.19
SPTLC1-202ENST00000337841 PHIPQ8WWQ0 1821 aa13.87□□□□□ -0.19
SPTLC1-202ENST00000337841 CCDC196A0A1B0GTZ2 297 aa13.87□□□□□ -0.19
SPTLC1-202ENST00000337841 DHX16O60231 1041 aaKnown RBP13.87□□□□□ -0.19
SPTLC1-202ENST00000337841 RCAN1P53805 252 aa13.87□□□□□ -0.19
SPTLC1-202ENST00000337841 APOBRQ0VD83 1088 aa13.87□□□□□ -0.19
SPTLC1-202ENST00000337841 RABEP1Q15276 862 aa13.87□□□□□ -0.19
SPTLC1-202ENST00000337841 FAM110CQ1W6H9 321 aa13.87□□□□□ -0.19
SPTLC1-202ENST00000337841 APOA5Q6Q788 366 aa13.87□□□□□ -0.19
SPTLC1-202ENST00000337841 UBA5Q9GZZ9 404 aa13.87□□□□□ -0.19
SPTLC1-202ENST00000337841 VAT1LQ9HCJ6 419 aa13.87□□□□□ -0.19
SPTLC1-202ENST00000337841 MAD2L2Q9UI95 211 aa13.87□□□□□ -0.19
SPTLC1-202ENST00000337841 PNMA2Q9UL42 364 aa13.87□□□□□ -0.19
SPTLC1-202ENST00000337841 BRPF3Q9ULD4 1205 aa13.87□□□□□ -0.19
SPTLC1-202ENST00000337841 PRR12Q9ULL5 1215 aa13.87□□□□□ -0.19
SPTLC1-202ENST00000337841 GREB1LQ9C091 1923 aaPredicted RBP13.87□□□□□ -0.19
SPTLC1-202ENST00000337841 ADGRA2Q96PE1 1338 aa13.87□□□□□ -0.19
SPTLC1-202ENST00000337841 HSPA8P11142 646 aaKnown RBP13.86□□□□□ -0.19
SPTLC1-202ENST00000337841 SMARCA1P28370 1054 aa13.86□□□□□ -0.19
SPTLC1-202ENST00000337841 STAT3P40763 770 aa13.86□□□□□ -0.19
SPTLC1-202ENST00000337841 LBX1P52954 281 aa13.86□□□□□ -0.19
SPTLC1-202ENST00000337841 EVCP57679 992 aa13.86□□□□□ -0.19
SPTLC1-202ENST00000337841 ERVK-9P63128 1117 aa13.86□□□□□ -0.19
SPTLC1-202ENST00000337841 ERVK-24P63145 666 aa13.86□□□□□ -0.19
SPTLC1-202ENST00000337841 PLS1Q14651 629 aa13.86□□□□□ -0.19
SPTLC1-202ENST00000337841 ZNF274Q96GC6 653 aaPredicted RBP13.86□□□□□ -0.19
SPTLC1-202ENST00000337841 ERO1AQ96HE7 468 aa13.86□□□□□ -0.19
SPTLC1-202ENST00000337841 MYL10Q9BUA6 226 aa13.86□□□□□ -0.19
SPTLC1-202ENST00000337841 SLC38A10Q9HBR0 1119 aa13.86□□□□□ -0.19
SPTLC1-202ENST00000337841 CWC22Q9HCG8 908 aaKnown RBP13.86□□□□□ -0.19
SPTLC1-202ENST00000337841 RBM28Q9NW13 759 aaKnown RBP13.86□□□□□ -0.19
SPTLC1-202ENST00000337841 BTBD7Q9P203 1132 aa13.86□□□□□ -0.19
SPTLC1-202ENST00000337841 GOLGA8AA7E2F4 631 aa13.85□□□□□ -0.19
SPTLC1-202ENST00000337841 GOLGA8BA8MQT2 603 aa13.85□□□□□ -0.19
SPTLC1-202ENST00000337841 SLC25A27O95847 323 aa13.85□□□□□ -0.19
SPTLC1-202ENST00000337841 COPB2P35606 906 aa13.85□□□□□ -0.19
SPTLC1-202ENST00000337841 OAZ1P54368 228 aa13.85□□□□□ -0.19
SPTLC1-202ENST00000337841 TOB2Q14106 344 aaPredicted RBP13.85□□□□□ -0.19
SPTLC1-202ENST00000337841 TMEM132BQ14DG7 1078 aa13.85□□□□□ -0.19
SPTLC1-202ENST00000337841 RTN1Q16799 776 aa13.85□□□□□ -0.19
SPTLC1-202ENST00000337841 Q3C1V9 767 aa13.85□□□□□ -0.19
SPTLC1-202ENST00000337841 RASGRP2Q7LDG7 609 aa13.85□□□□□ -0.19
SPTLC1-202ENST00000337841 MICU3Q86XE3 530 aa13.85□□□□□ -0.19
SPTLC1-202ENST00000337841 CCDC144CPQ8IYA2 1237 aa13.85□□□□□ -0.19
SPTLC1-202ENST00000337841 ADGRF4Q8IZF3 695 aa13.85□□□□□ -0.19
SPTLC1-202ENST00000337841 CPXCR1Q8N123 301 aa13.85□□□□□ -0.19
SPTLC1-202ENST00000337841 STAG2Q8N3U4 1231 aa13.85□□□□□ -0.19
SPTLC1-202ENST00000337841 ZNF296Q8WUU4 475 aaPredicted RBP13.85□□□□□ -0.19
SPTLC1-202ENST00000337841 KIF2CQ99661 725 aa13.85□□□□□ -0.19
SPTLC1-202ENST00000337841 SPATC1LQ9H0A9 340 aa13.85□□□□□ -0.19
SPTLC1-202ENST00000337841 TXNRD2Q9NNW7 524 aa13.85□□□□□ -0.19
SPTLC1-202ENST00000337841 THSD7BQ9C0I4 1608 aa13.84□□□□□ -0.19
SPTLC1-202ENST00000337841 ATP2A1O14983 1001 aa13.84□□□□□ -0.19
SPTLC1-202ENST00000337841 ST18O60284 1047 aa13.84□□□□□ -0.19
SPTLC1-202ENST00000337841 CNMDO75829 334 aa13.84□□□□□ -0.19
SPTLC1-202ENST00000337841 FMNL1O95466 1100 aaPredicted RBP13.84□□□□□ -0.19
SPTLC1-202ENST00000337841 RXRAP19793 462 aa13.84□□□□□ -0.19
SPTLC1-202ENST00000337841 HOXD10P28358 340 aa13.84□□□□□ -0.19
SPTLC1-202ENST00000337841 PDIA3P30101 505 aaKnown RBP13.84□□□□□ -0.19
SPTLC1-202ENST00000337841 MAPK4P31152 587 aa13.84□□□□□ -0.19
SPTLC1-202ENST00000337841 SLC4A3P48751 1232 aa13.84□□□□□ -0.19
SPTLC1-202ENST00000337841 METAP2P50579 478 aaKnown RBP eCLIP13.84□□□□□ -0.19
SPTLC1-202ENST00000337841 AK2P54819 239 aa13.84□□□□□ -0.19
SPTLC1-202ENST00000337841 FCGRTP55899 365 aa13.84□□□□□ -0.19
SPTLC1-202ENST00000337841 LACTBP83111 547 aaPredicted RBP13.84□□□□□ -0.19
SPTLC1-202ENST00000337841 TRAF1Q13077 416 aa13.84□□□□□ -0.19
SPTLC1-202ENST00000337841 RAB11FIP4Q86YS3 637 aa13.84□□□□□ -0.19
SPTLC1-202ENST00000337841 TEX13BQ9BXU2 312 aa13.84□□□□□ -0.19
SPTLC1-202ENST00000337841 MROH8Q9H579 483 aa13.84□□□□□ -0.19
SPTLC1-202ENST00000337841 RAVER2Q9HCJ3 691 aaKnown RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms