RNA–Protein interactions for RNA: ENST00000334536.12

SPNS1-203, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 1 (best) BASIC

Gene SPNS1, Length 2,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-203ENST00000334536 ERCC5P28715 1186 aaPredicted RBP23.16■■□□□ 1.3
SPNS1-203ENST00000334536 FUT2Q10981 343 aa23.16■■□□□ 1.3
SPNS1-203ENST00000334536 TBX2Q13207 712 aaPredicted RBP23.16■■□□□ 1.3
SPNS1-203ENST00000334536 ZKSCAN8Q15776 578 aaPredicted RBP23.16■■□□□ 1.3
SPNS1-203ENST00000334536 ENAHQ8N8S7 591 aaPredicted RBP23.16■■□□□ 1.3
SPNS1-203ENST00000334536 MARCH10Q8NA82 808 aaPredicted RBP23.16■■□□□ 1.3
SPNS1-203ENST00000334536 ACSBG1Q96GR2 724 aa23.16■■□□□ 1.3
SPNS1-203ENST00000334536 MYH14Q7Z406 1995 aaKnown RBP23.15■■□□□ 1.3
SPNS1-203ENST00000334536 DDAH1O94760 285 aa23.15■■□□□ 1.3
SPNS1-203ENST00000334536 GYG1P46976 350 aa23.15■■□□□ 1.3
SPNS1-203ENST00000334536 PKN1Q16512 942 aa23.15■■□□□ 1.3
SPNS1-203ENST00000334536 WLSQ5T9L3 541 aa23.15■■□□□ 1.3
SPNS1-203ENST00000334536 FBXW10Q5XX13 1052 aa23.15■■□□□ 1.3
SPNS1-203ENST00000334536 TMED8Q6PL24 325 aaPredicted RBP23.15■■□□□ 1.3
SPNS1-203ENST00000334536 IQCA1Q86XH1 822 aa23.15■■□□□ 1.3
SPNS1-203ENST00000334536 CMTR1Q8N1G2 835 aaKnown RBP23.15■■□□□ 1.3
SPNS1-203ENST00000334536 PNKPQ96T60 521 aa23.15■■□□□ 1.3
SPNS1-203ENST00000334536 DUOX1Q9NRD9 1551 aa23.15■■□□□ 1.3
SPNS1-203ENST00000334536 SHTN1A0MZ66 631 aa23.15■■□□□ 1.3
SPNS1-203ENST00000334536 NBPF9Q3BBW0 867 aa23.15■■□□□ 1.3
SPNS1-203ENST00000334536 IFIT1BQ5T764 474 aaKnown RBP23.15■■□□□ 1.3
SPNS1-203ENST00000334536 FERMT2Q96AC1 680 aa23.15■■□□□ 1.3
SPNS1-203ENST00000334536 JPH2Q9BR39 696 aaPredicted RBP23.15■■□□□ 1.3
SPNS1-203ENST00000334536 CSRNP2Q9H175 543 aa23.15■■□□□ 1.3
SPNS1-203ENST00000334536 PDS5AQ29RF7 1337 aaKnown RBP23.14■■□□□ 1.3
SPNS1-203ENST00000334536 CACNA1SQ13698 1873 aa23.14■■□□□ 1.3
SPNS1-203ENST00000334536 CCDC12Q8WUD4 166 aaPredicted RBP23.14■■□□□ 1.29
SPNS1-203ENST00000334536 IQSEC3Q9UPP2 1182 aaPredicted RBP23.14■■□□□ 1.29
SPNS1-203ENST00000334536 COL1A1P02452 1464 aaPredicted RBP23.14■■□□□ 1.29
SPNS1-203ENST00000334536 A0A0G2JS52 829 aa23.13■■□□□ 1.29
SPNS1-203ENST00000334536 ANKRD33BA6NCL7 494 aa23.13■■□□□ 1.29
SPNS1-203ENST00000334536 TMEM232C9JQI7 657 aa23.13■■□□□ 1.29
SPNS1-203ENST00000334536 PLCD1P51178 756 aa23.13■■□□□ 1.29
SPNS1-203ENST00000334536 BAG1Q99933 345 aaPredicted RBP23.13■■□□□ 1.29
SPNS1-203ENST00000334536 INTS13Q9NVM9 706 aa23.13■■□□□ 1.29
SPNS1-203ENST00000334536 NFE2L3Q9Y4A8 694 aa23.13■■□□□ 1.29
SPNS1-203ENST00000334536 A0A1B0GUL6 1792 aa23.13■■□□□ 1.29
SPNS1-203ENST00000334536 ERFEQ4G0M1 354 aa23.13■■□□□ 1.29
SPNS1-203ENST00000334536 SLC10A5Q5PT55 438 aa23.13■■□□□ 1.29
SPNS1-203ENST00000334536 B4GALNT4Q76KP1 1039 aa23.13■■□□□ 1.29
SPNS1-203ENST00000334536 MINPP1Q9UNW1 487 aa23.13■■□□□ 1.29
SPNS1-203ENST00000334536 ORC4O43929 436 aa23.12■■□□□ 1.29
SPNS1-203ENST00000334536 MYH6P13533 1939 aa23.12■■□□□ 1.29
SPNS1-203ENST00000334536 PLCB4Q15147 1175 aa23.12■■□□□ 1.29
SPNS1-203ENST00000334536 WHAMMP3Q1A5X7 153 aa23.12■■□□□ 1.29
SPNS1-203ENST00000334536 FBXO33Q7Z6M2 555 aa23.12■■□□□ 1.29
SPNS1-203ENST00000334536 FAM84BQ96KN1 310 aaPredicted RBP23.12■■□□□ 1.29
SPNS1-203ENST00000334536 DLEC1Q9Y238 1755 aa23.12■■□□□ 1.29
SPNS1-203ENST00000334536 SYF2O95926 243 aaKnown RBP23.11■■□□□ 1.29
SPNS1-203ENST00000334536 FNTAP49354 379 aa23.11■■□□□ 1.29
SPNS1-203ENST00000334536 FMR1Q06787 632 aaKnown RBP eCLIP23.11■■□□□ 1.293e-12■■■■■ 43.2
SPNS1-203ENST00000334536 ZKSCAN4Q969J2 545 aaPredicted RBP23.11■■□□□ 1.29
SPNS1-203ENST00000334536 VPS54Q9P1Q0 977 aa23.11■■□□□ 1.29
SPNS1-203ENST00000334536 ZNF831Q5JPB2 1677 aa23.11■■□□□ 1.29
SPNS1-203ENST00000334536 CCT5P48643 541 aa23.11■■□□□ 1.29
SPNS1-203ENST00000334536 DYNLL1P63167 89 aaKnown RBP23.11■■□□□ 1.29
SPNS1-203ENST00000334536 TROAPQ12815 778 aa23.11■■□□□ 1.29
SPNS1-203ENST00000334536 SPECC1LQ69YQ0 1117 aa23.11■■□□□ 1.29
SPNS1-203ENST00000334536 SH3RF1Q7Z6J0 888 aa23.11■■□□□ 1.29
SPNS1-203ENST00000334536 SHISA4Q96DD7 197 aa23.11■■□□□ 1.29
SPNS1-203ENST00000334536 TRIM6Q9C030 488 aaPredicted RBP23.11■■□□□ 1.29
SPNS1-203ENST00000334536 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.11■■□□□ 1.29
SPNS1-203ENST00000334536 V9GY48 417 aaPredicted RBP23.11■■□□□ 1.29
SPNS1-203ENST00000334536 COL4A1P02462 1669 aa23.11■■□□□ 1.29
SPNS1-203ENST00000334536 ARHGAP25P42331 645 aa23.1■■□□□ 1.29
SPNS1-203ENST00000334536 ICA1Q05084 483 aa23.1■■□□□ 1.29
SPNS1-203ENST00000334536 PPFIA1Q13136 1202 aa23.1■■□□□ 1.29
SPNS1-203ENST00000334536 BIRC2Q13490 618 aa23.1■■□□□ 1.29
SPNS1-203ENST00000334536 BARGINQ6ZT62 677 aa23.1■■□□□ 1.29
SPNS1-203ENST00000334536 TMTC3Q6ZXV5 915 aa23.1■■□□□ 1.29
SPNS1-203ENST00000334536 YTHDF3Q7Z739 585 aaKnown RBP23.1■■□□□ 1.29
SPNS1-203ENST00000334536 N4BP2L2Q92802 583 aaPredicted RBP23.1■■□□□ 1.29
SPNS1-203ENST00000334536 SCN7AQ01118 1682 aa23.1■■□□□ 1.29
SPNS1-203ENST00000334536 VSNL1P62760 191 aa23.09■■□□□ 1.29
SPNS1-203ENST00000334536 COL5A3P25940 1745 aaPredicted RBP23.09■■□□□ 1.29
SPNS1-203ENST00000334536 SPATA31A5Q5VU36 1347 aa23.09■■□□□ 1.29
SPNS1-203ENST00000334536 SPATA31A7Q8IWB4 1347 aa23.09■■□□□ 1.29
SPNS1-203ENST00000334536 LRRIQ3A6PVS8 624 aaPredicted RBP23.09■■□□□ 1.29
SPNS1-203ENST00000334536 IRF6O14896 467 aa23.09■■□□□ 1.29
SPNS1-203ENST00000334536 USP49Q70CQ1 688 aa23.09■■□□□ 1.29
SPNS1-203ENST00000334536 PDILTQ8N807 584 aa23.09■■□□□ 1.29
SPNS1-203ENST00000334536 FAM76AQ8TAV0 307 aa23.09■■□□□ 1.29
SPNS1-203ENST00000334536 MAGEC3Q8TD91 643 aa23.09■■□□□ 1.29
SPNS1-203ENST00000334536 TNFRSF25Q93038 417 aa23.09■■□□□ 1.29
SPNS1-203ENST00000334536 PLEKHA4Q9H4M7 779 aa23.09■■□□□ 1.29
SPNS1-203ENST00000334536 A0A1B0GUA9 196 aa23.08■■□□□ 1.29
SPNS1-203ENST00000334536 PLEKHA8P1O95397 391 aa23.08■■□□□ 1.29
SPNS1-203ENST00000334536 NT5C2P49902 561 aa23.08■■□□□ 1.29
SPNS1-203ENST00000334536 C3orf67Q6ZVT6 689 aa23.08■■□□□ 1.29
SPNS1-203ENST00000334536 GRAMD1CQ8IYS0 662 aa23.08■■□□□ 1.29
SPNS1-203ENST00000334536 FAM177A1Q8N128 213 aaPredicted RBP23.08■■□□□ 1.29
SPNS1-203ENST00000334536 PYM1Q9BRP8 204 aaKnown RBP23.08■■□□□ 1.29
SPNS1-203ENST00000334536 PAGR1Q9BTK6 254 aa23.08■■□□□ 1.29
SPNS1-203ENST00000334536 ODF2LQ9ULJ1 636 aa23.08■■□□□ 1.29
SPNS1-203ENST00000334536 IRAK1P51617 712 aa23.08■■□□□ 1.28
SPNS1-203ENST00000334536 SPATA1Q5VX52 437 aa23.08■■□□□ 1.28
SPNS1-203ENST00000334536 HOMEZQ8IX15 550 aa23.08■■□□□ 1.28
SPNS1-203ENST00000334536 C8orf37Q96NL8 207 aa23.08■■□□□ 1.28
SPNS1-203ENST00000334536 GSDMAQ96QA5 445 aa23.08■■□□□ 1.28
SPNS1-203ENST00000334536 CRNKL1Q9BZJ0 848 aaKnown RBP23.08■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms