RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 TRIM14Q14142 442 aa6.65□□□□□ -1.35
CDC42BPA-201ENST00000334218 ARMC6Q6NXE6 501 aa6.65□□□□□ -1.35
CDC42BPA-201ENST00000334218 CATSPER2Q96P56 530 aa6.65□□□□□ -1.35
CDC42BPA-201ENST00000334218 ARHGAP26Q9UNA1 814 aa6.65□□□□□ -1.35
CDC42BPA-201ENST00000334218 CCDC88CQ9P219 2028 aa6.64□□□□□ -1.35
CDC42BPA-201ENST00000334218 LOC102724159A0A0B4J2E5 919 aa6.64□□□□□ -1.35
CDC42BPA-201ENST00000334218 B3GALNT1O75752 331 aa6.64□□□□□ -1.35
CDC42BPA-201ENST00000334218 CASP2P42575 452 aa6.64□□□□□ -1.35
CDC42BPA-201ENST00000334218 PWP2Q15269 919 aaKnown RBP6.64□□□□□ -1.35
CDC42BPA-201ENST00000334218 C15orf59Q2T9L4 293 aaPredicted RBP6.64□□□□□ -1.35
CDC42BPA-201ENST00000334218 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.64□□□□□ -1.35
CDC42BPA-201ENST00000334218 CFAP221Q4G0U5 840 aa6.64□□□□□ -1.35
CDC42BPA-201ENST00000334218 ANO5Q75V66 913 aa6.64□□□□□ -1.35
CDC42BPA-201ENST00000334218 C20orf96Q9NUD7 363 aaPredicted RBP6.64□□□□□ -1.35
CDC42BPA-201ENST00000334218 UBE4BO95155 1302 aa6.64□□□□□ -1.35
CDC42BPA-201ENST00000334218 TBC1D12O60347 775 aa6.64□□□□□ -1.35
CDC42BPA-201ENST00000334218 ADCY5O95622 1261 aa6.64□□□□□ -1.35
CDC42BPA-201ENST00000334218 TBRG1Q3YBR2 411 aa6.64□□□□□ -1.35
CDC42BPA-201ENST00000334218 RBM20Q5T481 1227 aaKnown RBP6.64□□□□□ -1.35
CDC42BPA-201ENST00000334218 BSPRYQ5W0U4 402 aa6.64□□□□□ -1.35
CDC42BPA-201ENST00000334218 ATAD3AQ9NVI7 634 aa6.64□□□□□ -1.35
CDC42BPA-201ENST00000334218 TPP2P29144 1249 aaPredicted RBP6.64□□□□□ -1.35
CDC42BPA-201ENST00000334218 MCM4P33991 863 aa6.64□□□□□ -1.35
CDC42BPA-201ENST00000334218 KRT9P35527 623 aa6.64□□□□□ -1.35
CDC42BPA-201ENST00000334218 SLFNL1Q499Z3 407 aa6.64□□□□□ -1.35
CDC42BPA-201ENST00000334218 TOM1L2Q6ZVM7 507 aa6.64□□□□□ -1.35
CDC42BPA-201ENST00000334218 RTL3Q8N8U3 475 aaKnown RBP6.64□□□□□ -1.35
CDC42BPA-201ENST00000334218 CAPN10Q9HC96 672 aa6.64□□□□□ -1.35
CDC42BPA-201ENST00000334218 CCDC151A5D8V7 595 aa6.64□□□□□ -1.35
CDC42BPA-201ENST00000334218 MSH2P43246 934 aa6.64□□□□□ -1.35
CDC42BPA-201ENST00000334218 MAPK9P45984 424 aa6.64□□□□□ -1.35
CDC42BPA-201ENST00000334218 POTEAQ6S8J7 498 aa6.64□□□□□ -1.35
CDC42BPA-201ENST00000334218 SEPT1Q8WYJ6 367 aa6.64□□□□□ -1.35
CDC42BPA-201ENST00000334218 EXOC4Q96A65 974 aa6.64□□□□□ -1.35
CDC42BPA-201ENST00000334218 TINF2Q9BSI4 451 aa6.64□□□□□ -1.35
CDC42BPA-201ENST00000334218 DMAP1Q9NPF5 467 aaPredicted RBP6.64□□□□□ -1.35
CDC42BPA-201ENST00000334218 MCUBQ9NWR8 336 aa6.64□□□□□ -1.35
CDC42BPA-201ENST00000334218 IL1RAPL1Q9NZN1 696 aa6.64□□□□□ -1.35
CDC42BPA-201ENST00000334218 COX16Q9P0S2 106 aa6.64□□□□□ -1.35
CDC42BPA-201ENST00000334218 CDC40O60508 579 aaKnown RBP eCLIP6.64□□□□□ -1.35
CDC42BPA-201ENST00000334218 ARF4P18085 180 aaPredicted RBP6.64□□□□□ -1.35
CDC42BPA-201ENST00000334218 IKBIPQ70UQ0 350 aa6.64□□□□□ -1.35
CDC42BPA-201ENST00000334218 DDI1Q8WTU0 396 aa6.64□□□□□ -1.35
CDC42BPA-201ENST00000334218 PIGUQ9H490 435 aa6.64□□□□□ -1.35
CDC42BPA-201ENST00000334218 MAP3K7O43318 606 aa6.64□□□□□ -1.35
CDC42BPA-201ENST00000334218 RAB15P59190 212 aa6.64□□□□□ -1.35
CDC42BPA-201ENST00000334218 SUZ12Q15022 739 aaKnown RBP6.64□□□□□ -1.35
CDC42BPA-201ENST00000334218 PDCD6IPQ8WUM4 868 aaKnown RBP6.64□□□□□ -1.35
CDC42BPA-201ENST00000334218 PKD2L1Q9P0L9 805 aa6.64□□□□□ -1.35
CDC42BPA-201ENST00000334218 RRP15Q9Y3B9 282 aaKnown RBP6.64□□□□□ -1.35
CDC42BPA-201ENST00000334218 ZNF189O75820 626 aaPredicted RBP6.64□□□□□ -1.35
CDC42BPA-201ENST00000334218 VIL1P09327 827 aaKnown RBP6.64□□□□□ -1.35
CDC42BPA-201ENST00000334218 UBTFL6P0CB48 400 aaPredicted RBP6.64□□□□□ -1.35
CDC42BPA-201ENST00000334218 SIKE1Q9BRV8 207 aa6.64□□□□□ -1.35
CDC42BPA-201ENST00000334218 TTLL3Q9Y4R7 772 aa6.64□□□□□ -1.35
CDC42BPA-201ENST00000334218 PARP1P09874 1014 aaKnown RBP6.63□□□□□ -1.35
CDC42BPA-201ENST00000334218 KCNJ6P48051 423 aa6.63□□□□□ -1.35
CDC42BPA-201ENST00000334218 GUCY1A3Q02108 690 aa6.63□□□□□ -1.35
CDC42BPA-201ENST00000334218 NUMA1Q14980 2115 aa6.63□□□□□ -1.35
CDC42BPA-201ENST00000334218 CEP55Q53EZ4 464 aa6.63□□□□□ -1.35
CDC42BPA-201ENST00000334218 KLC3Q6P597 504 aa6.63□□□□□ -1.35
CDC42BPA-201ENST00000334218 CCDC149Q6ZUS6 474 aa6.63□□□□□ -1.35
CDC42BPA-201ENST00000334218 RNF135Q8IUD6 432 aa6.63□□□□□ -1.35
CDC42BPA-201ENST00000334218 DTX3LQ8TDB6 740 aa6.63□□□□□ -1.35
CDC42BPA-201ENST00000334218 RGL1Q9NZL6 768 aa6.63□□□□□ -1.35
CDC42BPA-201ENST00000334218 WDR37Q9Y2I8 494 aa6.63□□□□□ -1.35
CDC42BPA-201ENST00000334218 F8W810 466 aa6.63□□□□□ -1.35
CDC42BPA-201ENST00000334218 CHAMP1Q96JM3 812 aa6.63□□□□□ -1.35
CDC42BPA-201ENST00000334218 EHMT1Q9H9B1 1298 aa6.63□□□□□ -1.35
CDC42BPA-201ENST00000334218 POLE2P56282 527 aa6.63□□□□□ -1.35
CDC42BPA-201ENST00000334218 PIGKQ92643 395 aa6.63□□□□□ -1.35
CDC42BPA-201ENST00000334218 DHX36Q9H2U1 1008 aaKnown RBP6.63□□□□□ -1.35
CDC42BPA-201ENST00000334218 UBE3AQ05086 875 aa6.63□□□□□ -1.35
CDC42BPA-201ENST00000334218 PLEKHA7Q6IQ23 1121 aa6.63□□□□□ -1.35
CDC42BPA-201ENST00000334218 BNIPLQ7Z465 357 aa6.63□□□□□ -1.35
CDC42BPA-201ENST00000334218 C1orf131Q8NDD1 294 aaKnown RBP6.63□□□□□ -1.35
CDC42BPA-201ENST00000334218 NUP88Q99567 741 aaPredicted RBP6.63□□□□□ -1.35
CDC42BPA-201ENST00000334218 SLC26A4O43511 780 aa6.63□□□□□ -1.35
CDC42BPA-201ENST00000334218 AP2B1P63010 937 aa6.63□□□□□ -1.35
CDC42BPA-201ENST00000334218 TRIM32Q13049 653 aa6.63□□□□□ -1.35
CDC42BPA-201ENST00000334218 FAM71BQ8TC56 605 aa6.63□□□□□ -1.35
CDC42BPA-201ENST00000334218 GSDMAQ96QA5 445 aa6.63□□□□□ -1.35
CDC42BPA-201ENST00000334218 RETREG1Q9H6L5 497 aa6.63□□□□□ -1.35
CDC42BPA-201ENST00000334218 VCPKMTQ9H867 229 aa6.63□□□□□ -1.35
CDC42BPA-201ENST00000334218 FESP07332 822 aa6.63□□□□□ -1.35
CDC42BPA-201ENST00000334218 UTS2BQ765I0 119 aa6.63□□□□□ -1.35
CDC42BPA-201ENST00000334218 TTC29Q8NA56 475 aaPredicted RBP6.63□□□□□ -1.35
CDC42BPA-201ENST00000334218 CALML6Q8TD86 181 aa6.63□□□□□ -1.35
CDC42BPA-201ENST00000334218 EVI5LQ96CN4 794 aa6.63□□□□□ -1.35
CDC42BPA-201ENST00000334218 CCPG1Q9ULG6 757 aa6.63□□□□□ -1.35
CDC42BPA-201ENST00000334218 ATP8A1Q9Y2Q0 1164 aa6.63□□□□□ -1.35
CDC42BPA-201ENST00000334218 GAP43P17677 238 aa6.63□□□□□ -1.35
CDC42BPA-201ENST00000334218 ACAT1P24752 427 aaKnown RBP6.63□□□□□ -1.35
CDC42BPA-201ENST00000334218 TAF11Q15544 211 aa6.63□□□□□ -1.35
CDC42BPA-201ENST00000334218 TERF2Q15554 542 aa6.63□□□□□ -1.35
CDC42BPA-201ENST00000334218 RABL6Q3YEC7 729 aaPredicted RBP6.63□□□□□ -1.35
CDC42BPA-201ENST00000334218 ANKS6Q68DC2 871 aa6.63□□□□□ -1.35
CDC42BPA-201ENST00000334218 S100A6P06703 90 aa6.62□□□□□ -1.35
CDC42BPA-201ENST00000334218 CASP8Q14790 479 aa6.62□□□□□ -1.35
CDC42BPA-201ENST00000334218 ITPRIPL1Q6GPH6 555 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms