RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 NEDD4P46934 1319 aa13.31□□□□□ -0.28
HDAC6-201ENST00000334136 USP17L5A8MUK1 530 aa13.31□□□□□ -0.28
HDAC6-201ENST00000334136 SSBP05455 408 aaKnown RBP eCLIP13.31□□□□□ -0.28
HDAC6-201ENST00000334136 KRT18P05783 430 aaKnown RBP13.31□□□□□ -0.28
HDAC6-201ENST00000334136 BMP3P12645 472 aa13.31□□□□□ -0.28
HDAC6-201ENST00000334136 LIFRP42702 1097 aa13.31□□□□□ -0.28
HDAC6-201ENST00000334136 SPP2Q13103 211 aa13.31□□□□□ -0.28
HDAC6-201ENST00000334136 GRIK5Q16478 980 aa13.31□□□□□ -0.28
HDAC6-201ENST00000334136 OTUD7BQ6GQQ9 843 aa13.31□□□□□ -0.28
HDAC6-201ENST00000334136 ADGRA1Q86SQ6 560 aa13.31□□□□□ -0.28
HDAC6-201ENST00000334136 NRBP1Q9UHY1 535 aa13.31□□□□□ -0.28
HDAC6-201ENST00000334136 NFKBIEO00221 500 aa13.31□□□□□ -0.28
HDAC6-201ENST00000334136 WNT10BO00744 389 aa13.31□□□□□ -0.28
HDAC6-201ENST00000334136 SH2B2O14492 632 aaPredicted RBP13.31□□□□□ -0.28
HDAC6-201ENST00000334136 KARSQ15046 597 aaKnown RBP13.31□□□□□ -0.28
HDAC6-201ENST00000334136 LEO1Q8WVC0 666 aaPredicted RBP13.31□□□□□ -0.28
HDAC6-201ENST00000334136 FAM163AQ96GL9 167 aaPredicted RBP13.31□□□□□ -0.28
HDAC6-201ENST00000334136 RRAGCQ9HB90 399 aa13.31□□□□□ -0.28
HDAC6-201ENST00000334136 GPHNQ9NQX3 736 aaPredicted RBP13.31□□□□□ -0.28
HDAC6-201ENST00000334136 ARFGEF2Q9Y6D5 1785 aa13.3□□□□□ -0.28
HDAC6-201ENST00000334136 JAK2O60674 1132 aa13.3□□□□□ -0.28
HDAC6-201ENST00000334136 MYCNP04198 464 aaPredicted RBP13.3□□□□□ -0.28
HDAC6-201ENST00000334136 AKR1B1P15121 316 aa13.3□□□□□ -0.28
HDAC6-201ENST00000334136 KRT2P35908 639 aa13.3□□□□□ -0.28
HDAC6-201ENST00000334136 TMEM266Q2M3C6 531 aa13.3□□□□□ -0.28
HDAC6-201ENST00000334136 KCTD1Q719H9 257 aa13.3□□□□□ -0.28
HDAC6-201ENST00000334136 NUP98P52948 1817 aa13.3□□□□□ -0.28
HDAC6-201ENST00000334136 ORC4O43929 436 aa13.3□□□□□ -0.28
HDAC6-201ENST00000334136 PFKFB2O60825 505 aa13.3□□□□□ -0.28
HDAC6-201ENST00000334136 ASPRV1Q53RT3 343 aa13.3□□□□□ -0.28
HDAC6-201ENST00000334136 C10orf67Q8IYJ2 551 aa13.3□□□□□ -0.28
HDAC6-201ENST00000334136 NEDD1Q8NHV4 660 aa13.3□□□□□ -0.28
HDAC6-201ENST00000334136 CEP95Q96GE4 821 aa13.3□□□□□ -0.28
HDAC6-201ENST00000334136 NUP88Q99567 741 aaPredicted RBP13.3□□□□□ -0.28
HDAC6-201ENST00000334136 ZNF215Q9UL58 517 aaPredicted RBP13.3□□□□□ -0.28
HDAC6-201ENST00000334136 USP17L2Q6R6M4 530 aa13.3□□□□□ -0.28
HDAC6-201ENST00000334136 GPRC5DQ9NZD1 345 aa13.3□□□□□ -0.28
HDAC6-201ENST00000334136 GBP3Q9H0R5 595 aa13.29□□□□□ -0.28
HDAC6-201ENST00000334136 IL25Q9H293 177 aa13.29□□□□□ -0.28
HDAC6-201ENST00000334136 ERO1AQ96HE7 468 aa13.29□□□□□ -0.28
HDAC6-201ENST00000334136 ZMYM6O95789 1325 aa13.29□□□□□ -0.28
HDAC6-201ENST00000334136 SPTLC2O15270 562 aa13.29□□□□□ -0.28
HDAC6-201ENST00000334136 NMT2O60551 498 aa13.29□□□□□ -0.28
HDAC6-201ENST00000334136 CFBP00751 764 aa13.29□□□□□ -0.28
HDAC6-201ENST00000334136 ALAS1P13196 640 aa13.29□□□□□ -0.28
HDAC6-201ENST00000334136 CHMP4BP1P59074 171 aa13.29□□□□□ -0.28
HDAC6-201ENST00000334136 CYB5R4Q7L1T6 521 aa13.29□□□□□ -0.28
HDAC6-201ENST00000334136 SLC51AQ86UW1 340 aa13.29□□□□□ -0.28
HDAC6-201ENST00000334136 OTUD5Q96G74 571 aa13.29□□□□□ -0.28
HDAC6-201ENST00000334136 GLT8D2Q9H1C3 349 aa13.29□□□□□ -0.28
HDAC6-201ENST00000334136 LZTFL1Q9NQ48 299 aa13.29□□□□□ -0.28
HDAC6-201ENST00000334136 PUF60Q9UHX1 559 aaKnown RBP13.29□□□□□ -0.28
HDAC6-201ENST00000334136 EEF2P13639 858 aaKnown RBP13.28□□□□□ -0.28
HDAC6-201ENST00000334136 APOBEC3HQ6NTF7 200 aaKnown RBP13.28□□□□□ -0.28
HDAC6-201ENST00000334136 TMEM47Q9BQJ4 181 aa13.28□□□□□ -0.28
HDAC6-201ENST00000334136 RSPH14Q9UHP6 348 aa13.28□□□□□ -0.28
HDAC6-201ENST00000334136 TCRBV5S4A2TA0A5A2 114 aa13.28□□□□□ -0.28
HDAC6-201ENST00000334136 USP17L10C9JJH3 530 aa13.28□□□□□ -0.28
HDAC6-201ENST00000334136 SLC16A2P36021 539 aa13.28□□□□□ -0.28
HDAC6-201ENST00000334136 AK9Q5TCS8 1911 aa13.28□□□□□ -0.28
HDAC6-201ENST00000334136 YDJCA8MPS7 323 aa13.28□□□□□ -0.28
HDAC6-201ENST00000334136 NR1I2O75469 434 aa13.28□□□□□ -0.28
HDAC6-201ENST00000334136 CAPN2P17655 700 aa13.28□□□□□ -0.28
HDAC6-201ENST00000334136 FBXO11Q86XK2 927 aa13.28□□□□□ -0.28
HDAC6-201ENST00000334136 KCNG4Q8TDN1 519 aa13.28□□□□□ -0.28
HDAC6-201ENST00000334136 CLSTN2Q9H4D0 955 aa13.28□□□□□ -0.28
HDAC6-201ENST00000334136 MTMR6Q9Y217 621 aa13.28□□□□□ -0.28
HDAC6-201ENST00000334136 STIM1Q13586 685 aa13.28□□□□□ -0.28
HDAC6-201ENST00000334136 MAP1SQ66K74 1059 aaPredicted RBP13.28□□□□□ -0.28
HDAC6-201ENST00000334136 MB21D2Q8IYB1 491 aaPredicted RBP13.28□□□□□ -0.28
HDAC6-201ENST00000334136 IPO4Q8TEX9 1081 aaKnown RBP13.28□□□□□ -0.28
HDAC6-201ENST00000334136 MRIQ9BWK5 157 aa13.28□□□□□ -0.28
HDAC6-201ENST00000334136 ZHX3Q9H4I2 956 aa13.28□□□□□ -0.28
HDAC6-201ENST00000334136 VPS54Q9P1Q0 977 aa13.28□□□□□ -0.28
HDAC6-201ENST00000334136 CDR1P51861 262 aa13.27□□□□□ -0.28
HDAC6-201ENST00000334136 SPDYE2Q495Y8 402 aa13.27□□□□□ -0.28
HDAC6-201ENST00000334136 ENAHQ8N8S7 591 aaPredicted RBP13.27□□□□□ -0.28
HDAC6-201ENST00000334136 GPATCH11Q8N954 259 aa13.27□□□□□ -0.28
HDAC6-201ENST00000334136 BMP2KQ9NSY1 1161 aaPredicted RBP13.27□□□□□ -0.28
HDAC6-201ENST00000334136 A0A087WWV3 80 aa13.27□□□□□ -0.29
HDAC6-201ENST00000334136 EVCP57679 992 aa13.27□□□□□ -0.29
HDAC6-201ENST00000334136 MAP3K9P80192 1104 aa13.27□□□□□ -0.29
HDAC6-201ENST00000334136 ERCC6LQ2NKX8 1250 aa13.27□□□□□ -0.29
HDAC6-201ENST00000334136 FAM83AQ86UY5 434 aa13.27□□□□□ -0.29
HDAC6-201ENST00000334136 DIS3L2Q8IYB7 885 aaKnown RBP13.27□□□□□ -0.29
HDAC6-201ENST00000334136 CARD6Q9BX69 1037 aa13.27□□□□□ -0.29
HDAC6-201ENST00000334136 TCP11L1Q9NUJ3 509 aa13.27□□□□□ -0.29
HDAC6-201ENST00000334136 SAMM50Q9Y512 469 aa13.27□□□□□ -0.29
HDAC6-201ENST00000334136 OSBPP22059 807 aa13.27□□□□□ -0.29
HDAC6-201ENST00000334136 AFMP43652 599 aa13.27□□□□□ -0.29
HDAC6-201ENST00000334136 ADCY7P51828 1080 aa13.27□□□□□ -0.29
HDAC6-201ENST00000334136 ODF2Q5BJF6 829 aa13.27□□□□□ -0.29
HDAC6-201ENST00000334136 C16orf86Q6ZW13 317 aa13.27□□□□□ -0.29
HDAC6-201ENST00000334136 TXLNBQ8N3L3 684 aa13.27□□□□□ -0.29
HDAC6-201ENST00000334136 KIF2CQ99661 725 aa13.27□□□□□ -0.29
HDAC6-201ENST00000334136 MATR3P43243 847 aaKnown RBP eCLIP13.26□□□□□ -0.29
HDAC6-201ENST00000334136 STAT2P52630 851 aa13.26□□□□□ -0.29
HDAC6-201ENST00000334136 STOX1Q6ZVD7 989 aa13.26□□□□□ -0.29
HDAC6-201ENST00000334136 KCNJ14Q9UNX9 436 aa13.26□□□□□ -0.29
HDAC6-201ENST00000334136 CELF2O95319 508 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms