RNA–Protein interactions for RNA: ENST00000332556.4

LAMP1-201, Transcript of lysosomal associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAMP1, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1-201ENST00000332556 UBA5Q9GZZ9 404 aa21.54■■□□□ 1.04
LAMP1-201ENST00000332556 SOWAHDA6NJG2 315 aa21.53■■□□□ 1.04
LAMP1-201ENST00000332556 OAS2P29728 719 aaKnown RBP21.53■■□□□ 1.04
LAMP1-201ENST00000332556 PPP2R3AQ06190 1150 aa21.53■■□□□ 1.04
LAMP1-201ENST00000332556 RRAGBQ5VZM2 374 aa21.53■■□□□ 1.04
LAMP1-201ENST00000332556 SRCAPQ6ZRS2 3230 aa21.53■■□□□ 1.04
LAMP1-201ENST00000332556 VGLL3A8MV65 326 aa21.53■■□□□ 1.04
LAMP1-201ENST00000332556 PPP1R3GB7ZBB8 358 aa21.53■■□□□ 1.04
LAMP1-201ENST00000332556 CC2D1AQ6P1N0 951 aaPredicted RBP21.53■■□□□ 1.04
LAMP1-201ENST00000332556 SRRTQ9BXP5 876 aaKnown RBP21.53■■□□□ 1.04
LAMP1-201ENST00000332556 TRIM49BA6NDI0 452 aa21.52■■□□□ 1.04
LAMP1-201ENST00000332556 PPP2R5BQ15173 497 aa21.52■■□□□ 1.04
LAMP1-201ENST00000332556 SPECC1LQ69YQ0 1117 aa21.52■■□□□ 1.04
LAMP1-201ENST00000332556 SPATA20Q8TB22 786 aa21.52■■□□□ 1.04
LAMP1-201ENST00000332556 VPS16Q9H269 839 aa21.52■■□□□ 1.04
LAMP1-201ENST00000332556 C6orf229H3BNL8 230 aa21.52■■□□□ 1.04
LAMP1-201ENST00000332556 SBK1Q52WX2 424 aa21.52■■□□□ 1.04
LAMP1-201ENST00000332556 LRRC15Q8TF66 581 aa21.52■■□□□ 1.04
LAMP1-201ENST00000332556 CD209Q9NNX6 404 aa21.52■■□□□ 1.04
LAMP1-201ENST00000332556 RASA1P20936 1047 aa21.52■■□□□ 1.03
LAMP1-201ENST00000332556 MEX3CQ5U5Q3 659 aaKnown RBP21.52■■□□□ 1.03
LAMP1-201ENST00000332556 SH3RF1Q7Z6J0 888 aa21.52■■□□□ 1.03
LAMP1-201ENST00000332556 PARD6BQ9BYG5 372 aa21.52■■□□□ 1.03
LAMP1-201ENST00000332556 POLLQ9UGP5 575 aa21.52■■□□□ 1.03
LAMP1-201ENST00000332556 FRMPD2Q68DX3 1309 aaPredicted RBP21.52■■□□□ 1.03
LAMP1-201ENST00000332556 MAP3K9P80192 1104 aa21.51■■□□□ 1.03
LAMP1-201ENST00000332556 RBL2Q08999 1139 aa21.51■■□□□ 1.03
LAMP1-201ENST00000332556 E2F4Q16254 413 aa21.51■■□□□ 1.03
LAMP1-201ENST00000332556 TEX11Q8IYF3 940 aa21.51■■□□□ 1.03
LAMP1-201ENST00000332556 RTFDC1Q9BY42 306 aaPredicted RBP21.51■■□□□ 1.03
LAMP1-201ENST00000332556 MFSD14BQ5SR56 506 aa21.51■■□□□ 1.03
LAMP1-201ENST00000332556 SPTY2D1Q68D10 685 aaPredicted RBP21.51■■□□□ 1.03
LAMP1-201ENST00000332556 APTXQ7Z2E3 356 aaKnown RBP21.51■■□□□ 1.03
LAMP1-201ENST00000332556 WDR66Q8TBY9 1149 aa21.51■■□□□ 1.03
LAMP1-201ENST00000332556 FERMT2Q96AC1 680 aa21.51■■□□□ 1.03
LAMP1-201ENST00000332556 MRFAP1Q9Y605 127 aa21.51■■□□□ 1.03
LAMP1-201ENST00000332556 CAPN2P17655 700 aa21.5■■□□□ 1.03
LAMP1-201ENST00000332556 KIF5BP33176 963 aa21.5■■□□□ 1.03
LAMP1-201ENST00000332556 TBX2Q13207 712 aaPredicted RBP21.5■■□□□ 1.03
LAMP1-201ENST00000332556 NR1I3Q14994 352 aa21.5■■□□□ 1.03
LAMP1-201ENST00000332556 MRPL44Q9H9J2 332 aaKnown RBP21.5■■□□□ 1.03
LAMP1-201ENST00000332556 LZTFL1Q9NQ48 299 aa21.5■■□□□ 1.03
LAMP1-201ENST00000332556 PCDHA6Q9UN73 950 aa21.5■■□□□ 1.03
LAMP1-201ENST00000332556 PCDHA8Q9Y5H6 950 aa21.5■■□□□ 1.03
LAMP1-201ENST00000332556 KIAA1551Q9HCM1 1747 aa21.5■■□□□ 1.03
LAMP1-201ENST00000332556 CCDC194A0A1B0GVG4 234 aa21.5■■□□□ 1.03
LAMP1-201ENST00000332556 RNF225M0QZC1 329 aaPredicted RBP21.5■■□□□ 1.03
LAMP1-201ENST00000332556 SMC1AQ14683 1233 aaKnown RBP21.5■■□□□ 1.03
LAMP1-201ENST00000332556 KANK3Q6NY19 840 aa21.5■■□□□ 1.03
LAMP1-201ENST00000332556 PDXDC2PQ6P474 469 aa21.5■■□□□ 1.03
LAMP1-201ENST00000332556 ZNF804AQ7Z570 1209 aa21.5■■□□□ 1.03
LAMP1-201ENST00000332556 KIFC2Q96AC6 838 aa21.5■■□□□ 1.03
LAMP1-201ENST00000332556 TAB2Q9NYJ8 693 aa21.5■■□□□ 1.03
LAMP1-201ENST00000332556 SERPINB2P05120 415 aa21.49■■□□□ 1.03
LAMP1-201ENST00000332556 CCDC12Q8WUD4 166 aaPredicted RBP21.49■■□□□ 1.03
LAMP1-201ENST00000332556 EYA3Q99504 573 aa21.49■■□□□ 1.03
LAMP1-201ENST00000332556 DACH1Q9UI36 760 aa21.49■■□□□ 1.03
LAMP1-201ENST00000332556 KLRF2D3W0D1 207 aa21.49■■□□□ 1.03
LAMP1-201ENST00000332556 ABL1P00519 1130 aa21.49■■□□□ 1.03
LAMP1-201ENST00000332556 CDK8P49336 464 aa21.49■■□□□ 1.03
LAMP1-201ENST00000332556 C4orf32Q8N8J7 132 aa21.49■■□□□ 1.03
LAMP1-201ENST00000332556 IGSF22Q8N9C0 903 aa21.49■■□□□ 1.03
LAMP1-201ENST00000332556 CCDC88AQ3V6T2 1871 aa21.48■■□□□ 1.03
LAMP1-201ENST00000332556 PES1O00541 588 aaKnown RBP21.48■■□□□ 1.03
LAMP1-201ENST00000332556 BAG3O95817 575 aa21.48■■□□□ 1.03
LAMP1-201ENST00000332556 GYS1P13807 737 aa21.48■■□□□ 1.03
LAMP1-201ENST00000332556 GTF2IP78347 998 aa21.48■■□□□ 1.03
LAMP1-201ENST00000332556 FCHSD1Q86WN1 690 aa21.48■■□□□ 1.03
LAMP1-201ENST00000332556 GPIHBP1Q8IV16 184 aa21.48■■□□□ 1.03
LAMP1-201ENST00000332556 FNBP4Q8N3X1 1017 aaPredicted RBP21.48■■□□□ 1.03
LAMP1-201ENST00000332556 PCDHA4Q9UN74 947 aa21.48■■□□□ 1.03
LAMP1-201ENST00000332556 TFRCP02786 760 aaKnown RBP21.48■■□□□ 1.03
LAMP1-201ENST00000332556 LETM2Q2VYF4 491 aa21.48■■□□□ 1.03
LAMP1-201ENST00000332556 SPATA1Q5VX52 437 aa21.48■■□□□ 1.03
LAMP1-201ENST00000332556 GPR161Q8N6U8 529 aaKnown RBP21.48■■□□□ 1.03
LAMP1-201ENST00000332556 IQUBQ8NA54 791 aa21.48■■□□□ 1.03
LAMP1-201ENST00000332556 CEP95Q96GE4 821 aa21.48■■□□□ 1.03
LAMP1-201ENST00000332556 TMEM260Q9NX78 707 aa21.48■■□□□ 1.03
LAMP1-201ENST00000332556 PCP11498 1178 aaKnown RBP21.47■■□□□ 1.03
LAMP1-201ENST00000332556 CASP14P31944 242 aa21.47■■□□□ 1.03
LAMP1-201ENST00000332556 STAT6P42226 847 aa21.47■■□□□ 1.03
LAMP1-201ENST00000332556 PMS1P54277 932 aaKnown RBP21.47■■□□□ 1.03
LAMP1-201ENST00000332556 LRRC47Q8N1G4 583 aaKnown RBP21.47■■□□□ 1.03
LAMP1-201ENST00000332556 HPS3Q969F9 1004 aa21.47■■□□□ 1.03
LAMP1-201ENST00000332556 ARFGAP3Q9NP61 516 aa21.47■■□□□ 1.03
LAMP1-201ENST00000332556 PUF60Q9UHX1 559 aaKnown RBP21.47■■□□□ 1.03
LAMP1-201ENST00000332556 SBF2Q86WG5 1849 aa21.47■■□□□ 1.03
LAMP1-201ENST00000332556 STX10O60499 249 aa21.47■■□□□ 1.03
LAMP1-201ENST00000332556 GRM4Q14833 912 aa21.47■■□□□ 1.03
LAMP1-201ENST00000332556 JAKMIP3Q5VZ66 844 aa21.47■■□□□ 1.03
LAMP1-201ENST00000332556 RSRC2Q7L4I2 434 aaKnown RBP21.47■■□□□ 1.03
LAMP1-201ENST00000332556 SEPT12Q8IYM1 358 aa21.47■■□□□ 1.03
LAMP1-201ENST00000332556 BIN2Q9UBW5 565 aaPredicted RBP21.47■■□□□ 1.03
LAMP1-201ENST00000332556 LEMD3Q9Y2U8 911 aa21.47■■□□□ 1.03
LAMP1-201ENST00000332556 A0A1B0GTH6 734 aa21.46■■□□□ 1.03
LAMP1-201ENST00000332556 TPM1P09493 284 aa21.46■■□□□ 1.03
LAMP1-201ENST00000332556 FXR1P51114 621 aaKnown RBP eCLIP21.46■■□□□ 1.03
LAMP1-201ENST00000332556 SCNN1DP51172 638 aa21.46■■□□□ 1.03
LAMP1-201ENST00000332556 RAD9BQ6WBX8 426 aa21.46■■□□□ 1.03
LAMP1-201ENST00000332556 TRIML1Q8N9V2 468 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms