RNA–Protein interactions for RNA: ENST00000332506.7

C3orf35-202, Transcript of chromosome 3 open reading frame 35, humanhuman

TSL 1 (best)

Gene C3orf35, Length 1,845 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf35-202ENST00000332506 PFKFB3Q16875 520 aaPredicted RBP13.67□□□□□ -0.22
C3orf35-202ENST00000332506 GPATCH4Q5T3I0 446 aaKnown RBP13.67□□□□□ -0.22
C3orf35-202ENST00000332506 USP48Q86UV5 1035 aa13.67□□□□□ -0.22
C3orf35-202ENST00000332506 SPICE1Q8N0Z3 855 aa13.67□□□□□ -0.22
C3orf35-202ENST00000332506 RGS22Q8NE09 1264 aa13.67□□□□□ -0.22
C3orf35-202ENST00000332506 ZKSCAN4Q969J2 545 aaPredicted RBP13.67□□□□□ -0.22
C3orf35-202ENST00000332506 SHISA4Q96DD7 197 aa13.67□□□□□ -0.22
C3orf35-202ENST00000332506 NUP88Q99567 741 aaPredicted RBP13.67□□□□□ -0.22
C3orf35-202ENST00000332506 RBM27Q9P2N5 1060 aaKnown RBP13.67□□□□□ -0.22
C3orf35-202ENST00000332506 ZNF112Q9UJU3 913 aa13.67□□□□□ -0.22
C3orf35-202ENST00000332506 CNPY2Q9Y2B0 182 aa13.67□□□□□ -0.22
C3orf35-202ENST00000332506 TMX2Q9Y320 296 aa13.67□□□□□ -0.22
C3orf35-202ENST00000332506 KIF28PB7ZC32 967 aa13.67□□□□□ -0.22
C3orf35-202ENST00000332506 MMP1P03956 469 aa13.67□□□□□ -0.22
C3orf35-202ENST00000332506 XBP1P17861 261 aa13.67□□□□□ -0.22
C3orf35-202ENST00000332506 SMARCA1P28370 1054 aa13.67□□□□□ -0.22
C3orf35-202ENST00000332506 SLC16A2P36021 539 aa13.67□□□□□ -0.22
C3orf35-202ENST00000332506 KIF23Q02241 960 aaPredicted RBP13.67□□□□□ -0.22
C3orf35-202ENST00000332506 ZYXQ15942 572 aaKnown RBP13.67□□□□□ -0.22
C3orf35-202ENST00000332506 PNMA8AQ86V59 439 aaPredicted RBP13.67□□□□□ -0.22
C3orf35-202ENST00000332506 HOMER1Q86YM7 354 aa13.67□□□□□ -0.22
C3orf35-202ENST00000332506 GPKOWQ92917 476 aaPredicted RBP eCLIP13.67□□□□□ -0.22
C3orf35-202ENST00000332506 KLRG1Q96E93 195 aa13.67□□□□□ -0.22
C3orf35-202ENST00000332506 RRP36Q96EU6 259 aaKnown RBP13.67□□□□□ -0.22
C3orf35-202ENST00000332506 PIGSQ96S52 555 aa13.67□□□□□ -0.22
C3orf35-202ENST00000332506 GDPD2Q9HCC8 539 aa13.67□□□□□ -0.22
C3orf35-202ENST00000332506 SYNPO2Q9UMS6 1093 aa13.67□□□□□ -0.22
C3orf35-202ENST00000332506 KIAA1755Q5JYT7 1200 aa13.66□□□□□ -0.22
C3orf35-202ENST00000332506 SCYL3Q8IZE3 742 aa13.66□□□□□ -0.22
C3orf35-202ENST00000332506 GMCL1Q96IK5 515 aa13.66□□□□□ -0.22
C3orf35-202ENST00000332506 RIOX1Q9H6W3 641 aa13.66□□□□□ -0.22
C3orf35-202ENST00000332506 GOPCQ9HD26 462 aa13.66□□□□□ -0.22
C3orf35-202ENST00000332506 GINM1Q9NU53 330 aa13.66□□□□□ -0.22
C3orf35-202ENST00000332506 DCAF8L1A6NGE4 600 aa13.65□□□□□ -0.22
C3orf35-202ENST00000332506 USP2O75604 605 aaPredicted RBP13.65□□□□□ -0.22
C3orf35-202ENST00000332506 LETM1O95202 739 aaPredicted RBP13.65□□□□□ -0.22
C3orf35-202ENST00000332506 BMP3P12645 472 aa13.65□□□□□ -0.22
C3orf35-202ENST00000332506 GNL2Q13823 731 aaKnown RBP13.65□□□□□ -0.22
C3orf35-202ENST00000332506 SAFBQ15424 915 aaKnown RBP eCLIP13.65□□□□□ -0.22
C3orf35-202ENST00000332506 ADGRF4Q8IZF3 695 aa13.65□□□□□ -0.22
C3orf35-202ENST00000332506 BBXQ8WY36 941 aaPredicted RBP13.65□□□□□ -0.22
C3orf35-202ENST00000332506 FEZ1Q99689 392 aa13.65□□□□□ -0.22
C3orf35-202ENST00000332506 PHF20Q9BVI0 1012 aa13.65□□□□□ -0.22
C3orf35-202ENST00000332506 SH2D4AQ9H788 454 aa13.65□□□□□ -0.22
C3orf35-202ENST00000332506 PRDM10Q9NQV6 1147 aa13.65□□□□□ -0.22
C3orf35-202ENST00000332506 SEC63Q9UGP8 760 aaKnown RBP13.65□□□□□ -0.22
C3orf35-202ENST00000332506 CLEC11AQ9Y240 323 aa13.65□□□□□ -0.22
C3orf35-202ENST00000332506 BTBD18B2RXH4 712 aa13.64□□□□□ -0.23
C3orf35-202ENST00000332506 FIBPO43427 364 aa13.64□□□□□ -0.23
C3orf35-202ENST00000332506 PRPF40AO75400 957 aaKnown RBP13.64□□□□□ -0.23
C3orf35-202ENST00000332506 POTEIP0CG38 1075 aa13.64□□□□□ -0.23
C3orf35-202ENST00000332506 POTEJP0CG39 1038 aa13.64□□□□□ -0.23
C3orf35-202ENST00000332506 WWC2Q6AWC2 1192 aa13.64□□□□□ -0.23
C3orf35-202ENST00000332506 HEATR3Q7Z4Q2 680 aa13.64□□□□□ -0.23
C3orf35-202ENST00000332506 DIS3L2Q8IYB7 885 aaKnown RBP13.64□□□□□ -0.23
C3orf35-202ENST00000332506 IPO4Q8TEX9 1081 aaKnown RBP13.64□□□□□ -0.23
C3orf35-202ENST00000332506 CNKSR2Q8WXI2 1034 aa13.64□□□□□ -0.23
C3orf35-202ENST00000332506 CDCA5Q96FF9 252 aa13.64□□□□□ -0.23
C3orf35-202ENST00000332506 VCPKMTQ9H867 229 aa13.64□□□□□ -0.23
C3orf35-202ENST00000332506 JMJD4Q9H9V9 463 aa13.64□□□□□ -0.23
C3orf35-202ENST00000332506 RRAGCQ9HB90 399 aa13.64□□□□□ -0.23
C3orf35-202ENST00000332506 TFIP11Q9UBB9 837 aaKnown RBP13.64□□□□□ -0.23
C3orf35-202ENST00000332506 USP17L10C9JJH3 530 aa13.64□□□□□ -0.23
C3orf35-202ENST00000332506 TMEM232C9JQI7 657 aa13.64□□□□□ -0.23
C3orf35-202ENST00000332506 KRT85P78386 507 aa13.64□□□□□ -0.23
C3orf35-202ENST00000332506 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.64□□□□□ -0.23
C3orf35-202ENST00000332506 OXER1Q8TDS5 423 aa13.64□□□□□ -0.23
C3orf35-202ENST00000332506 PICK1Q9NRD5 415 aa13.64□□□□□ -0.23
C3orf35-202ENST00000332506 PTPRAP18433 802 aa13.63□□□□□ -0.23
C3orf35-202ENST00000332506 U2AF2P26368 475 aaKnown RBP eCLIP13.63□□□□□ -0.234e-8■■□□□ 14.1
C3orf35-202ENST00000332506 NLRP5P59047 1200 aa13.63□□□□□ -0.23
C3orf35-202ENST00000332506 IKQ13123 557 aaPredicted RBP13.63□□□□□ -0.23
C3orf35-202ENST00000332506 FAM83BQ5T0W9 1011 aa13.63□□□□□ -0.23
C3orf35-202ENST00000332506 TYW1BQ6NUM6 668 aa13.63□□□□□ -0.23
C3orf35-202ENST00000332506 BRAPQ7Z569 592 aa13.63□□□□□ -0.23
C3orf35-202ENST00000332506 LMBRD1Q9NUN5 540 aa13.63□□□□□ -0.23
C3orf35-202ENST00000332506 BARHL2Q9NY43 387 aa13.63□□□□□ -0.23
C3orf35-202ENST00000332506 OTOFQ9HC10 1997 aa13.63□□□□□ -0.23
C3orf35-202ENST00000332506 STXBP3O00186 592 aa13.62□□□□□ -0.23
C3orf35-202ENST00000332506 PPP1R12BO60237 982 aaPredicted RBP13.62□□□□□ -0.23
C3orf35-202ENST00000332506 KRT2P35908 639 aa13.62□□□□□ -0.23
C3orf35-202ENST00000332506 CEBPZQ03701 1054 aaKnown RBP13.62□□□□□ -0.23
C3orf35-202ENST00000332506 NR5A1Q13285 461 aa13.62□□□□□ -0.23
C3orf35-202ENST00000332506 DGKZQ13574 1117 aa13.62□□□□□ -0.23
C3orf35-202ENST00000332506 MYSM1Q5VVJ2 828 aa13.62□□□□□ -0.23
C3orf35-202ENST00000332506 FTOQ9C0B1 505 aaKnown RBP eCLIP13.62□□□□□ -0.23
C3orf35-202ENST00000332506 FOXP1Q9H334 677 aaPredicted RBP13.62□□□□□ -0.23
C3orf35-202ENST00000332506 SH3GLB2Q9NR46 395 aa13.62□□□□□ -0.23
C3orf35-202ENST00000332506 PHIPQ8WWQ0 1821 aa13.62□□□□□ -0.23
C3orf35-202ENST00000332506 PNMA6FA0A0J9YX94 578 aa13.62□□□□□ -0.23
C3orf35-202ENST00000332506 NF2P35240 595 aa13.62□□□□□ -0.23
C3orf35-202ENST00000332506 NAPAP54920 295 aa13.62□□□□□ -0.23
C3orf35-202ENST00000332506 MAP3K9P80192 1104 aa13.62□□□□□ -0.23
C3orf35-202ENST00000332506 SPP2Q13103 211 aa13.62□□□□□ -0.23
C3orf35-202ENST00000332506 MTMR2Q13614 643 aa13.62□□□□□ -0.23
C3orf35-202ENST00000332506 NPY5RQ15761 445 aa13.62□□□□□ -0.23
C3orf35-202ENST00000332506 NOL9Q5SY16 702 aaKnown RBP13.62□□□□□ -0.23
C3orf35-202ENST00000332506 MAP1SQ66K74 1059 aaPredicted RBP13.62□□□□□ -0.23
C3orf35-202ENST00000332506 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.62□□□□□ -0.23
C3orf35-202ENST00000332506 NOSTRINQ8IVI9 506 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms