RNA–Protein interactions for RNA: ENST00000332408.8

SHC4-201, Transcript of SHC adaptor protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHC4, Length 4,558 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4-201ENST00000332408 MTIF3Q9H2K0 278 aaKnown RBP13.14□□□□□ -0.31
SHC4-201ENST00000332408 PCDHA1Q9Y5I3 950 aa13.14□□□□□ -0.31
SHC4-201ENST00000332408 CAVIN1Q6NZI2 390 aaKnown RBP13.13□□□□□ -0.31
SHC4-201ENST00000332408 ARRDC4Q8NCT1 418 aa13.13□□□□□ -0.31
SHC4-201ENST00000332408 CHST13Q8NET6 341 aa13.13□□□□□ -0.31
SHC4-201ENST00000332408 HTATIP2Q9BUP3 242 aa13.13□□□□□ -0.31
SHC4-201ENST00000332408 WDR18Q9BV38 432 aa13.13□□□□□ -0.31
SHC4-201ENST00000332408 BMP2KQ9NSY1 1161 aaPredicted RBP13.13□□□□□ -0.31
SHC4-201ENST00000332408 LIMCH1Q9UPQ0 1083 aa13.13□□□□□ -0.31
SHC4-201ENST00000332408 FOSP01100 380 aaPredicted RBP13.13□□□□□ -0.31
SHC4-201ENST00000332408 HERVK_113P62684 666 aa13.13□□□□□ -0.31
SHC4-201ENST00000332408 RASAL3Q86YV0 1011 aa13.13□□□□□ -0.31
SHC4-201ENST00000332408 ZNF396Q96N95 335 aaPredicted RBP13.13□□□□□ -0.31
SHC4-201ENST00000332408 RNF207Q6ZRF8 634 aa13.13□□□□□ -0.31
SHC4-201ENST00000332408 RAVER2Q9HCJ3 691 aaKnown RBP13.13□□□□□ -0.31
SHC4-201ENST00000332408 ZCCHC17Q9NP64 241 aaKnown RBP13.13□□□□□ -0.31
SHC4-201ENST00000332408 GPR25O00155 361 aa13.13□□□□□ -0.31
SHC4-201ENST00000332408 STRNO43815 780 aa13.13□□□□□ -0.31
SHC4-201ENST00000332408 AK9Q5TCS8 1911 aa13.13□□□□□ -0.31
SHC4-201ENST00000332408 ASTN2O75129 1339 aaPredicted RBP13.12□□□□□ -0.31
SHC4-201ENST00000332408 ABCB11O95342 1321 aa13.12□□□□□ -0.31
SHC4-201ENST00000332408 PLCD1P51178 756 aa13.12□□□□□ -0.31
SHC4-201ENST00000332408 NCBP1Q09161 790 aaKnown RBP13.12□□□□□ -0.31
SHC4-201ENST00000332408 CCDC84Q86UT8 332 aaPredicted RBP13.12□□□□□ -0.31
SHC4-201ENST00000332408 LBX1P52954 281 aa13.12□□□□□ -0.31
SHC4-201ENST00000332408 IFNL1Q8IU54 200 aa13.12□□□□□ -0.31
SHC4-201ENST00000332408 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.12□□□□□ -0.31
SHC4-201ENST00000332408 TRERF1Q96PN7 1200 aa13.12□□□□□ -0.31
SHC4-201ENST00000332408 MTMR4Q9NYA4 1195 aa13.12□□□□□ -0.31
SHC4-201ENST00000332408 MRVI1Q9Y6F6 885 aa13.12□□□□□ -0.31
SHC4-201ENST00000332408 AFDNP55196 1824 aaKnown RBP13.12□□□□□ -0.31
SHC4-201ENST00000332408 hCG_1984214I3L0E3 225 aa13.12□□□□□ -0.31
SHC4-201ENST00000332408 ZNF713Q8N859 430 aaPredicted RBP13.12□□□□□ -0.31
SHC4-201ENST00000332408 DPF3Q92784 378 aa13.12□□□□□ -0.31
SHC4-201ENST00000332408 RIOK1Q9BRS2 568 aaKnown RBP13.12□□□□□ -0.31
SHC4-201ENST00000332408 HMX1Q9NP08 348 aaPredicted RBP13.12□□□□□ -0.31
SHC4-201ENST00000332408 NUP98P52948 1817 aa13.11□□□□□ -0.31
SHC4-201ENST00000332408 RASSF10A6NK89 507 aa13.11□□□□□ -0.31
SHC4-201ENST00000332408 RARBP10826 455 aa13.11□□□□□ -0.31
SHC4-201ENST00000332408 CEBPZQ03701 1054 aaKnown RBP13.11□□□□□ -0.31
SHC4-201ENST00000332408 MTA3Q9BTC8 594 aa13.11□□□□□ -0.31
SHC4-201ENST00000332408 UBA5Q9GZZ9 404 aa13.11□□□□□ -0.31
SHC4-201ENST00000332408 RNF208Q9H0X6 261 aa13.11□□□□□ -0.31
SHC4-201ENST00000332408 ASCC2Q9H1I8 757 aaPredicted RBP13.11□□□□□ -0.31
SHC4-201ENST00000332408 TESPA1A2RU30 521 aaPredicted RBP13.11□□□□□ -0.31
SHC4-201ENST00000332408 SP4Q02446 784 aa13.11□□□□□ -0.31
SHC4-201ENST00000332408 STK38Q15208 465 aa13.11□□□□□ -0.31
SHC4-201ENST00000332408 DDX4Q9NQI0 724 aaKnown RBP13.11□□□□□ -0.31
SHC4-201ENST00000332408 PFASO15067 1338 aa13.11□□□□□ -0.31
SHC4-201ENST00000332408 NDUFB10O96000 172 aa13.11□□□□□ -0.31
SHC4-201ENST00000332408 GOLGA8HP0CJ92 632 aa13.11□□□□□ -0.31
SHC4-201ENST00000332408 RHBDL3P58872 404 aa13.11□□□□□ -0.31
SHC4-201ENST00000332408 NOL9Q5SY16 702 aaKnown RBP13.11□□□□□ -0.31
SHC4-201ENST00000332408 ZNF831Q5JPB2 1677 aa13.11□□□□□ -0.31
SHC4-201ENST00000332408 MSCO60682 206 aa13.1□□□□□ -0.31
SHC4-201ENST00000332408 CCND2P30279 289 aa13.1□□□□□ -0.31
SHC4-201ENST00000332408 HTRA3P83110 453 aa13.1□□□□□ -0.31
SHC4-201ENST00000332408 RNF180Q86T96 592 aa13.1□□□□□ -0.31
SHC4-201ENST00000332408 RSPH3Q86UC2 560 aa13.1□□□□□ -0.31
SHC4-201ENST00000332408 RETREG2Q8NC44 543 aa13.1□□□□□ -0.31
SHC4-201ENST00000332408 TMEM47Q9BQJ4 181 aa13.1□□□□□ -0.31
SHC4-201ENST00000332408 PSTPIP2Q9H939 334 aa13.1□□□□□ -0.31
SHC4-201ENST00000332408 TMX2Q9Y320 296 aa13.1□□□□□ -0.31
SHC4-201ENST00000332408 ADCY3O60266 1144 aa13.1□□□□□ -0.31
SHC4-201ENST00000332408 CDC37Q16543 378 aaPredicted RBP13.1□□□□□ -0.31
SHC4-201ENST00000332408 FZD1Q9UP38 647 aa13.1□□□□□ -0.31
SHC4-201ENST00000332408 PCDHAC2Q9Y5I4 1007 aa13.1□□□□□ -0.31
SHC4-201ENST00000332408 KINO60870 393 aaKnown RBP13.1□□□□□ -0.31
SHC4-201ENST00000332408 DEXIO95424 95 aa13.1□□□□□ -0.31
SHC4-201ENST00000332408 KRT85P78386 507 aa13.1□□□□□ -0.31
SHC4-201ENST00000332408 GRIK5Q16478 980 aa13.1□□□□□ -0.31
SHC4-201ENST00000332408 SLC16A2P36021 539 aa13.1□□□□□ -0.31
SHC4-201ENST00000332408 V9GY48 417 aaPredicted RBP13.1□□□□□ -0.31
SHC4-201ENST00000332408 LRP5O75197 1615 aa13.09□□□□□ -0.31
SHC4-201ENST00000332408 TCEANC2Q96MN5 208 aa13.09□□□□□ -0.31
SHC4-201ENST00000332408 TPM3P06753 285 aa13.09□□□□□ -0.31
SHC4-201ENST00000332408 VCAM1P19320 739 aa13.09□□□□□ -0.31
SHC4-201ENST00000332408 RASA1P20936 1047 aa13.09□□□□□ -0.31
SHC4-201ENST00000332408 APOBRQ0VD83 1088 aa13.09□□□□□ -0.31
SHC4-201ENST00000332408 STXBP2Q15833 593 aa13.09□□□□□ -0.31
SHC4-201ENST00000332408 TSR1Q2NL82 804 aaKnown RBP13.09□□□□□ -0.31
SHC4-201ENST00000332408 CD99L2Q8TCZ2 262 aa13.09□□□□□ -0.31
SHC4-201ENST00000332408 NSUN6Q8TEA1 469 aaKnown RBP13.09□□□□□ -0.31
SHC4-201ENST00000332408 TBC1D32Q96NH3 1257 aa13.09□□□□□ -0.31
SHC4-201ENST00000332408 ALG1Q9BT22 464 aa13.09□□□□□ -0.31
SHC4-201ENST00000332408 BTBD19C9JJ37 291 aa13.09□□□□□ -0.31
SHC4-201ENST00000332408 CYP2C8P10632 490 aa13.09□□□□□ -0.31
SHC4-201ENST00000332408 TTLL4Q14679 1199 aa13.09□□□□□ -0.31
SHC4-201ENST00000332408 RUFY3Q7L099 469 aa13.09□□□□□ -0.31
SHC4-201ENST00000332408 ZNF589Q86UQ0 364 aaPredicted RBP13.09□□□□□ -0.31
SHC4-201ENST00000332408 RNF214Q8ND24 703 aa13.09□□□□□ -0.31
SHC4-201ENST00000332408 SLAIN1Q8ND83 568 aa13.09□□□□□ -0.31
SHC4-201ENST00000332408 ANKRD20A12PQ8NF67 263 aa13.09□□□□□ -0.31
SHC4-201ENST00000332408 GLG1Q92896 1179 aa13.09□□□□□ -0.31
SHC4-201ENST00000332408 SAGE1Q9NXZ1 904 aa13.09□□□□□ -0.31
SHC4-201ENST00000332408 SHANK3Q9BYB0 1731 aa13.09□□□□□ -0.31
SHC4-201ENST00000332408 PAPPAQ13219 1627 aa13.08□□□□□ -0.31
SHC4-201ENST00000332408 TPM1P09493 284 aa13.08□□□□□ -0.31
SHC4-201ENST00000332408 RPS6KB1P23443 525 aa13.08□□□□□ -0.31
SHC4-201ENST00000332408 FAM110CQ1W6H9 321 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms