RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 ABCB5Q2M3G0 1257 aa18.14■□□□□ 0.49
CTHRC1-201ENST00000330295 NOC4LQ9BVI4 516 aaKnown RBP18.14■□□□□ 0.49
CTHRC1-201ENST00000330295 ABCB7O75027 752 aa18.13■□□□□ 0.49
CTHRC1-201ENST00000330295 SLC25A27O95847 323 aa18.13■□□□□ 0.49
CTHRC1-201ENST00000330295 PTPN5P54829 565 aa18.13■□□□□ 0.49
CTHRC1-201ENST00000330295 TTLL4Q14679 1199 aa18.13■□□□□ 0.49
CTHRC1-201ENST00000330295 KCTD2Q14681 263 aa18.13■□□□□ 0.49
CTHRC1-201ENST00000330295 PRSS33Q8NF86 280 aa18.13■□□□□ 0.49
CTHRC1-201ENST00000330295 ATG4CQ96DT6 458 aa18.13■□□□□ 0.49
CTHRC1-201ENST00000330295 SPC25Q9HBM1 224 aa18.13■□□□□ 0.49
CTHRC1-201ENST00000330295 LMCD1Q9NZU5 365 aa18.13■□□□□ 0.49
CTHRC1-201ENST00000330295 LRP2BPQ9P2M1 347 aa18.13■□□□□ 0.49
CTHRC1-201ENST00000330295 A0A1B0GUL7 405 aa18.12■□□□□ 0.49
CTHRC1-201ENST00000330295 GFRA3O60609 400 aa18.12■□□□□ 0.49
CTHRC1-201ENST00000330295 KCNA5P22460 613 aa18.12■□□□□ 0.49
CTHRC1-201ENST00000330295 CERKLQ49MI3 558 aaPredicted RBP18.12■□□□□ 0.49
CTHRC1-201ENST00000330295 GNASQ5JWF2 1037 aa18.12■□□□□ 0.49
CTHRC1-201ENST00000330295 PTCRAQ6ISU1 281 aaPredicted RBP18.12■□□□□ 0.49
CTHRC1-201ENST00000330295 UPF3AQ9H1J1 476 aaKnown RBP18.12■□□□□ 0.49
CTHRC1-201ENST00000330295 CABP5Q9NP86 173 aa18.12■□□□□ 0.49
CTHRC1-201ENST00000330295 ZHX1Q9UKY1 873 aaPredicted RBP18.12■□□□□ 0.49
CTHRC1-201ENST00000330295 MYH1P12882 1939 aa18.11■□□□□ 0.49
CTHRC1-201ENST00000330295 GJA9P57773 515 aa18.11■□□□□ 0.49
CTHRC1-201ENST00000330295 NAA16Q6N069 864 aaPredicted RBP18.11■□□□□ 0.49
CTHRC1-201ENST00000330295 FAM9BQ8IZU0 186 aa18.11■□□□□ 0.49
CTHRC1-201ENST00000330295 MSL3Q8N5Y2 521 aaKnown RBP18.11■□□□□ 0.49
CTHRC1-201ENST00000330295 SLC43A3Q8NBI5 491 aa18.11■□□□□ 0.49
CTHRC1-201ENST00000330295 SCLYQ96I15 445 aa18.11■□□□□ 0.49
CTHRC1-201ENST00000330295 SLC9A7Q96T83 725 aa18.11■□□□□ 0.49
CTHRC1-201ENST00000330295 PA2G4Q9UQ80 394 aaKnown RBP18.11■□□□□ 0.49
CTHRC1-201ENST00000330295 ZNF536O15090 1300 aa18.11■□□□□ 0.49
CTHRC1-201ENST00000330295 ZFHX2Q9C0A1 2572 aaPredicted RBP18.11■□□□□ 0.49
CTHRC1-201ENST00000330295 GRXCR2A6NFK2 248 aa18.1■□□□□ 0.49
CTHRC1-201ENST00000330295 FLOT1O75955 427 aa18.1■□□□□ 0.49
CTHRC1-201ENST00000330295 SNAI1O95863 264 aaPredicted RBP18.1■□□□□ 0.49
CTHRC1-201ENST00000330295 PFKMP08237 780 aa18.1■□□□□ 0.49
CTHRC1-201ENST00000330295 TMEM132BQ14DG7 1078 aa18.1■□□□□ 0.49
CTHRC1-201ENST00000330295 SPRED2Q7Z698 418 aa18.1■□□□□ 0.49
CTHRC1-201ENST00000330295 EHD4Q9H223 541 aa18.1■□□□□ 0.49
CTHRC1-201ENST00000330295 SERPINB13Q9UIV8 391 aa18.1■□□□□ 0.49
CTHRC1-201ENST00000330295 COL11A1P12107 1806 aaPredicted RBP18.09■□□□□ 0.49
CTHRC1-201ENST00000330295 PARP14Q460N5 1801 aa18.09■□□□□ 0.49
CTHRC1-201ENST00000330295 PTPRZ1P23471 2315 aaPredicted RBP18.09■□□□□ 0.49
CTHRC1-201ENST00000330295 A0A1W2PRG0 241 aa18.09■□□□□ 0.49
CTHRC1-201ENST00000330295 ADCY6O43306 1168 aa18.09■□□□□ 0.49
CTHRC1-201ENST00000330295 GUCY1A2P33402 732 aa18.09■□□□□ 0.49
CTHRC1-201ENST00000330295 ADGRA1Q86SQ6 560 aa18.09■□□□□ 0.49
CTHRC1-201ENST00000330295 PHOSPHO2Q8TCD6 241 aa18.09■□□□□ 0.49
CTHRC1-201ENST00000330295 GDPD5Q8WTR4 605 aa18.09■□□□□ 0.49
CTHRC1-201ENST00000330295 KIF28PB7ZC32 967 aa18.08■□□□□ 0.48
CTHRC1-201ENST00000330295 SEPT2Q15019 361 aa18.08■□□□□ 0.48
CTHRC1-201ENST00000330295 PUS10Q3MIT2 529 aaKnown RBP18.08■□□□□ 0.48
CTHRC1-201ENST00000330295 RIOX2Q8IUF8 465 aa18.08■□□□□ 0.48
CTHRC1-201ENST00000330295 AGBL1Q96MI9 1066 aa18.08■□□□□ 0.48
CTHRC1-201ENST00000330295 AKAP2Q9Y2D5 859 aa18.08■□□□□ 0.48
CTHRC1-201ENST00000330295 CTAGE5O15320 804 aa18.07■□□□□ 0.48
CTHRC1-201ENST00000330295 B4GALT4O60513 344 aa18.07■□□□□ 0.48
CTHRC1-201ENST00000330295 ARID4AP29374 1257 aaPredicted RBP18.07■□□□□ 0.48
CTHRC1-201ENST00000330295 KIAA1755Q5JYT7 1200 aa18.07■□□□□ 0.48
CTHRC1-201ENST00000330295 MAMDC4Q6UXC1 1216 aa18.07■□□□□ 0.48
CTHRC1-201ENST00000330295 HERC6Q8IVU3 1022 aa18.07■□□□□ 0.48
CTHRC1-201ENST00000330295 WDR63Q8IWG1 891 aa18.07■□□□□ 0.48
CTHRC1-201ENST00000330295 TRPV6Q9H1D0 765 aa18.07■□□□□ 0.48
CTHRC1-201ENST00000330295 COPRSQ9NQ92 184 aa18.07■□□□□ 0.48
CTHRC1-201ENST00000330295 TECTAO75443 2155 aa18.06■□□□□ 0.48
CTHRC1-201ENST00000330295 ACTN1P12814 892 aa18.06■□□□□ 0.48
CTHRC1-201ENST00000330295 MCAMP43121 646 aa18.06■□□□□ 0.48
CTHRC1-201ENST00000330295 ITGA7Q13683 1181 aa18.06■□□□□ 0.48
CTHRC1-201ENST00000330295 ACVR2BQ13705 512 aa18.06■□□□□ 0.48
CTHRC1-201ENST00000330295 IER5LQ5T953 404 aa18.06■□□□□ 0.48
CTHRC1-201ENST00000330295 CXCL17Q6UXB2 119 aa18.06■□□□□ 0.48
CTHRC1-201ENST00000330295 ERMP1Q7Z2K6 904 aa18.06■□□□□ 0.48
CTHRC1-201ENST00000330295 DEFB128Q7Z7B8 93 aa18.06■□□□□ 0.48
CTHRC1-201ENST00000330295 NEUROD6Q96NK8 337 aa18.06■□□□□ 0.48
CTHRC1-201ENST00000330295 PRRX2Q99811 253 aa18.06■□□□□ 0.48
CTHRC1-201ENST00000330295 CACNA1BQ00975 2339 aa18.06■□□□□ 0.48
CTHRC1-201ENST00000330295 SCN5AQ14524 2016 aa18.06■□□□□ 0.48
CTHRC1-201ENST00000330295 CACNA1HO95180 2353 aa18.05■□□□□ 0.48
CTHRC1-201ENST00000330295 CABYRO75952 493 aa18.05■□□□□ 0.48
CTHRC1-201ENST00000330295 SHMT1P34896 483 aa18.05■□□□□ 0.48
CTHRC1-201ENST00000330295 BEX3Q00994 111 aa18.05■□□□□ 0.48
CTHRC1-201ENST00000330295 ZP2Q05996 745 aa18.05■□□□□ 0.48
CTHRC1-201ENST00000330295 TFCP2Q12800 502 aa18.05■□□□□ 0.48
CTHRC1-201ENST00000330295 TCF15Q12870 199 aa18.05■□□□□ 0.48
CTHRC1-201ENST00000330295 CCDC144BQ3MJ40 725 aa18.05■□□□□ 0.48
CTHRC1-201ENST00000330295 GORABQ5T7V8 394 aa18.05■□□□□ 0.48
CTHRC1-201ENST00000330295 C5orf42Q9H799 3197 aa18.05■□□□□ 0.48
CTHRC1-201ENST00000330295 GRIN2DO15399 1336 aa18.04■□□□□ 0.48
CTHRC1-201ENST00000330295 DYNLL1P63167 89 aaKnown RBP18.04■□□□□ 0.48
CTHRC1-201ENST00000330295 NKX3-2P78367 333 aa18.04■□□□□ 0.48
CTHRC1-201ENST00000330295 SEZ6LQ9BYH1 1024 aa18.04■□□□□ 0.48
CTHRC1-201ENST00000330295 PRKAG3Q9UGI9 489 aa18.04■□□□□ 0.48
CTHRC1-201ENST00000330295 ADAMTS5Q9UNA0 930 aa18.04■□□□□ 0.48
CTHRC1-201ENST00000330295 MCM3APO60318 1980 aa18.04■□□□□ 0.48
CTHRC1-201ENST00000330295 C19orf67A6NJJ6 358 aa18.03■□□□□ 0.48
CTHRC1-201ENST00000330295 CCER2I3L3R5 266 aa18.03■□□□□ 0.48
CTHRC1-201ENST00000330295 COPB2P35606 906 aa18.03■□□□□ 0.48
CTHRC1-201ENST00000330295 STAT3P40763 770 aa18.03■□□□□ 0.48
CTHRC1-201ENST00000330295 TTC6Q86TZ1 520 aa18.03■□□□□ 0.48
CTHRC1-201ENST00000330295 SPICE1Q8N0Z3 855 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms