RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 GOLGA8HP0CJ92 632 aa16.5■□□□□ 0.23
TPM3-206ENST00000330188 ADKP55263 362 aaKnown RBP16.5■□□□□ 0.23
TPM3-206ENST00000330188 DDR1Q08345 913 aa16.5■□□□□ 0.23
TPM3-206ENST00000330188 PPP4R3BQ5MIZ7 849 aa16.5■□□□□ 0.23
TPM3-206ENST00000330188 FAM177A1Q8N128 213 aaPredicted RBP16.5■□□□□ 0.23
TPM3-206ENST00000330188 UBE2Q2Q8WVN8 375 aa16.5■□□□□ 0.23
TPM3-206ENST00000330188 SPZ1Q9BXG8 430 aa16.5■□□□□ 0.23
TPM3-206ENST00000330188 CTNND2Q9UQB3 1225 aa16.5■□□□□ 0.23
TPM3-206ENST00000330188 KLRF2D3W0D1 207 aa16.49■□□□□ 0.23
TPM3-206ENST00000330188 SLU7O95391 586 aaKnown RBP16.49■□□□□ 0.23
TPM3-206ENST00000330188 ETF1P62495 437 aaKnown RBP16.49■□□□□ 0.23
TPM3-206ENST00000330188 INF2Q27J81 1249 aa16.49■□□□□ 0.23
TPM3-206ENST00000330188 TRIM65Q6PJ69 517 aa16.49■□□□□ 0.23
TPM3-206ENST00000330188 HOMER1Q86YM7 354 aa16.49■□□□□ 0.23
TPM3-206ENST00000330188 SLF2Q8IX21 1173 aa16.49■□□□□ 0.23
TPM3-206ENST00000330188 TBC1D22AQ8WUA7 517 aa16.49■□□□□ 0.23
TPM3-206ENST00000330188 ERO1AQ96HE7 468 aa16.49■□□□□ 0.23
TPM3-206ENST00000330188 CRAMP1Q96RY5 1269 aa16.49■□□□□ 0.23
TPM3-206ENST00000330188 TMEM60Q9H2L4 133 aa16.49■□□□□ 0.23
TPM3-206ENST00000330188 ADD3Q9UEY8 706 aaKnown RBP16.49■□□□□ 0.23
TPM3-206ENST00000330188 POLRMTO00411 1230 aaKnown RBP16.49■□□□□ 0.23
TPM3-206ENST00000330188 CDC25AP30304 524 aa16.49■□□□□ 0.23
TPM3-206ENST00000330188 TXLNAP40222 546 aa16.49■□□□□ 0.23
TPM3-206ENST00000330188 SLC27A3Q5K4L6 730 aa16.49■□□□□ 0.23
TPM3-206ENST00000330188 CPVLQ9H3G5 476 aa16.49■□□□□ 0.23
TPM3-206ENST00000330188 TRPC5Q9UL62 973 aaPredicted RBP16.49■□□□□ 0.23
TPM3-206ENST00000330188 PHLPP2Q6ZVD8 1323 aa16.48■□□□□ 0.23
TPM3-206ENST00000330188 ZSCAN12O43309 604 aa16.48■□□□□ 0.23
TPM3-206ENST00000330188 PBX1P40424 430 aa16.48■□□□□ 0.23
TPM3-206ENST00000330188 KARSQ15046 597 aaKnown RBP16.48■□□□□ 0.23
TPM3-206ENST00000330188 CCDC93Q567U6 631 aa16.48■□□□□ 0.23
TPM3-206ENST00000330188 RRAGBQ5VZM2 374 aa16.48■□□□□ 0.23
TPM3-206ENST00000330188 DTHD1Q6ZMT9 781 aa16.48■□□□□ 0.23
TPM3-206ENST00000330188 DISC1Q9NRI5 854 aa16.48■□□□□ 0.23
TPM3-206ENST00000330188 PPP2R2CQ9Y2T4 447 aa16.48■□□□□ 0.23
TPM3-206ENST00000330188 KLRG2A4D1S0 409 aaPredicted RBP16.48■□□□□ 0.23
TPM3-206ENST00000330188 RPN1P04843 607 aaKnown RBP16.48■□□□□ 0.23
TPM3-206ENST00000330188 PARP1P09874 1014 aaKnown RBP16.48■□□□□ 0.23
TPM3-206ENST00000330188 STAT6P42226 847 aa16.48■□□□□ 0.23
TPM3-206ENST00000330188 NOVP48745 357 aa16.48■□□□□ 0.23
TPM3-206ENST00000330188 CEP95Q96GE4 821 aa16.48■□□□□ 0.23
TPM3-206ENST00000330188 CTAGE1Q96RT6 745 aa16.48■□□□□ 0.23
TPM3-206ENST00000330188 ZMYND12Q9H0C1 365 aa16.48■□□□□ 0.23
TPM3-206ENST00000330188 ANKRD31Q8N7Z5 1873 aa16.47■□□□□ 0.23
TPM3-206ENST00000330188 C6orf229H3BNL8 230 aa16.47■□□□□ 0.23
TPM3-206ENST00000330188 NAALADL2Q58DX5 795 aa16.47■□□□□ 0.23
TPM3-206ENST00000330188 ZNF658Q5TYW1 1059 aaPredicted RBP16.47■□□□□ 0.23
TPM3-206ENST00000330188 USP17L2Q6R6M4 530 aa16.47■□□□□ 0.23
TPM3-206ENST00000330188 RMND1Q9NWS8 449 aa16.47■□□□□ 0.23
TPM3-206ENST00000330188 RWDD2AQ9UIY3 292 aa16.47■□□□□ 0.23
TPM3-206ENST00000330188 DAGLAQ9Y4D2 1042 aa16.47■□□□□ 0.23
TPM3-206ENST00000330188 PP2D1A8MPX8 630 aa16.46■□□□□ 0.23
TPM3-206ENST00000330188 AKR1B15C9JRZ8 316 aaPredicted RBP16.46■□□□□ 0.23
TPM3-206ENST00000330188 COBLO75128 1261 aa16.46■□□□□ 0.23
TPM3-206ENST00000330188 CGNQ9P2M7 1197 aaKnown RBP16.46■□□□□ 0.23
TPM3-206ENST00000330188 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.46■□□□□ 0.23
TPM3-206ENST00000330188 DNAI1Q9UI46 699 aa16.46■□□□□ 0.23
TPM3-206ENST00000330188 V9GYY5 206 aaPredicted RBP16.46■□□□□ 0.23
TPM3-206ENST00000330188 LAD1O00515 517 aa16.46■□□□□ 0.23
TPM3-206ENST00000330188 FANCGO15287 622 aa16.46■□□□□ 0.23
TPM3-206ENST00000330188 PRPHP41219 470 aa16.46■□□□□ 0.23
TPM3-206ENST00000330188 NAPAP54920 295 aa16.46■□□□□ 0.23
TPM3-206ENST00000330188 PAK1Q13153 545 aa16.46■□□□□ 0.23
TPM3-206ENST00000330188 TOGARAM2Q6ZUX3 1019 aa16.46■□□□□ 0.23
TPM3-206ENST00000330188 IGSF22Q8N9C0 903 aa16.46■□□□□ 0.23
TPM3-206ENST00000330188 QSER1Q2KHR3 1735 aa16.46■□□□□ 0.23
TPM3-206ENST00000330188 MYH8P13535 1937 aa16.45■□□□□ 0.22
TPM3-206ENST00000330188 PPEF1O14829 653 aaPredicted RBP16.45■□□□□ 0.22
TPM3-206ENST00000330188 SMARCA1P28370 1054 aa16.45■□□□□ 0.22
TPM3-206ENST00000330188 GTF2IP78347 998 aa16.45■□□□□ 0.22
TPM3-206ENST00000330188 FILIP1LQ4L180 1135 aa16.45■□□□□ 0.22
TPM3-206ENST00000330188 CCDC12Q8WUD4 166 aaPredicted RBP16.45■□□□□ 0.22
TPM3-206ENST00000330188 PANX2Q96RD6 677 aa16.45■□□□□ 0.22
TPM3-206ENST00000330188 CCSER1Q9C0I3 900 aa16.45■□□□□ 0.22
TPM3-206ENST00000330188 LIMA1Q9UHB6 759 aaKnown RBP16.45■□□□□ 0.22
TPM3-206ENST00000330188 PLIN4Q96Q06 1357 aa16.45■□□□□ 0.22
TPM3-206ENST00000330188 RBL2Q08999 1139 aa16.45■□□□□ 0.22
TPM3-206ENST00000330188 KRT25Q7Z3Z0 450 aa16.45■□□□□ 0.22
TPM3-206ENST00000330188 TMC4Q7Z404 712 aa16.45■□□□□ 0.22
TPM3-206ENST00000330188 SP8Q8IXZ3 490 aa16.45■□□□□ 0.22
TPM3-206ENST00000330188 NELFBQ8WX92 580 aa16.45■□□□□ 0.22
TPM3-206ENST00000330188 RRP36Q96EU6 259 aaKnown RBP16.45■□□□□ 0.22
TPM3-206ENST00000330188 GDAQ9Y2T3 454 aa16.45■□□□□ 0.22
TPM3-206ENST00000330188 BRWD3Q6RI45 1802 aa16.44■□□□□ 0.22
TPM3-206ENST00000330188 GOLGA6L9A6NEM1 432 aa16.44■□□□□ 0.22
TPM3-206ENST00000330188 SMCO2A6NFE2 343 aa16.44■□□□□ 0.22
TPM3-206ENST00000330188 LRRC10BA6NIK2 292 aa16.44■□□□□ 0.22
TPM3-206ENST00000330188 KRT31Q15323 416 aa16.44■□□□□ 0.22
TPM3-206ENST00000330188 ELF2Q15723 593 aa16.44■□□□□ 0.22
TPM3-206ENST00000330188 C6orf50Q9HD87 102 aa16.44■□□□□ 0.22
TPM3-206ENST00000330188 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.44■□□□□ 0.221e-10■■■□□ 17.4
TPM3-206ENST00000330188 ITIH6Q6UXX5 1313 aa16.44■□□□□ 0.22
TPM3-206ENST00000330188 USP17L5A8MUK1 530 aa16.43■□□□□ 0.22
TPM3-206ENST00000330188 RIMBP2O15034 1052 aa16.43■□□□□ 0.22
TPM3-206ENST00000330188 UBA7P41226 1012 aa16.43■□□□□ 0.22
TPM3-206ENST00000330188 PRCPP42785 496 aa16.43■□□□□ 0.22
TPM3-206ENST00000330188 GABPAQ06546 454 aa16.43■□□□□ 0.22
TPM3-206ENST00000330188 NONOQ15233 471 aaKnown RBP eCLIP16.43■□□□□ 0.221e-7■■■■□ 26.2
TPM3-206ENST00000330188 PPFIBP1Q86W92 1011 aa16.43■□□□□ 0.22
TPM3-206ENST00000330188 LRRN4CLQ8ND94 238 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms