RNA–Protein interactions for RNA: ENST00000326195.12

ABCF1-201, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ABCF1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-201ENST00000326195 VPS18Q9P253 973 aa11.72□□□□□ -0.53
ABCF1-201ENST00000326195 TACC3Q9Y6A5 838 aa11.72□□□□□ -0.53
ABCF1-201ENST00000326195 EPHX2P34913 555 aa11.72□□□□□ -0.53
ABCF1-201ENST00000326195 TRIM29Q14134 588 aa11.72□□□□□ -0.53
ABCF1-201ENST00000326195 SKIDA1Q1XH10 827 aa11.72□□□□□ -0.53
ABCF1-201ENST00000326195 DNAJC21Q5F1R6 531 aaKnown RBP11.72□□□□□ -0.53
ABCF1-201ENST00000326195 C15orf52Q6ZUT6 534 aaKnown RBP11.72□□□□□ -0.53
ABCF1-201ENST00000326195 C8orf76Q96K31 380 aa11.72□□□□□ -0.53
ABCF1-201ENST00000326195 EFCAB8A8MWE9 144 aa11.72□□□□□ -0.53
ABCF1-201ENST00000326195 HLA-DOAP06340 250 aa11.72□□□□□ -0.53
ABCF1-201ENST00000326195 GOLGA8HP0CJ92 632 aa11.72□□□□□ -0.53
ABCF1-201ENST00000326195 DGKZQ13574 1117 aa11.72□□□□□ -0.53
ABCF1-201ENST00000326195 TOB2Q14106 344 aaPredicted RBP11.72□□□□□ -0.53
ABCF1-201ENST00000326195 TMEM67Q5HYA8 995 aa11.72□□□□□ -0.53
ABCF1-201ENST00000326195 WWC2Q6AWC2 1192 aa11.72□□□□□ -0.53
ABCF1-201ENST00000326195 LRRC47Q8N1G4 583 aaKnown RBP11.72□□□□□ -0.53
ABCF1-201ENST00000326195 DCPSQ96C86 337 aaKnown RBP11.72□□□□□ -0.53
ABCF1-201ENST00000326195 SUGCTQ9HAC7 445 aa11.72□□□□□ -0.53
ABCF1-201ENST00000326195 ZSWIM5Q9P217 1185 aa11.72□□□□□ -0.53
ABCF1-201ENST00000326195 FAM198AQ9UFP1 575 aa11.72□□□□□ -0.53
ABCF1-201ENST00000326195 CYB5R4Q7L1T6 521 aa11.71□□□□□ -0.53
ABCF1-201ENST00000326195 GPC2Q8N158 579 aa11.71□□□□□ -0.53
ABCF1-201ENST00000326195 BANK1Q8NDB2 785 aa11.71□□□□□ -0.53
ABCF1-201ENST00000326195 ZKSCAN4Q969J2 545 aaPredicted RBP11.71□□□□□ -0.53
ABCF1-201ENST00000326195 PDE11AQ9HCR9 933 aa11.71□□□□□ -0.53
ABCF1-201ENST00000326195 IFNKQ9P0W0 207 aa11.71□□□□□ -0.53
ABCF1-201ENST00000326195 MYH13Q9UKX3 1938 aa11.71□□□□□ -0.54
ABCF1-201ENST00000326195 GOLGA8BA8MQT2 603 aa11.71□□□□□ -0.54
ABCF1-201ENST00000326195 CEP57L1Q8IYX8 460 aa11.71□□□□□ -0.54
ABCF1-201ENST00000326195 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.71□□□□□ -0.54
ABCF1-201ENST00000326195 PSD3Q9NYI0 1048 aa11.71□□□□□ -0.54
ABCF1-201ENST00000326195 SCN9AQ15858 1988 aa11.71□□□□□ -0.54
ABCF1-201ENST00000326195 BRD2P25440 801 aaKnown RBP11.7□□□□□ -0.54
ABCF1-201ENST00000326195 STX1AQ16623 288 aa11.7□□□□□ -0.54
ABCF1-201ENST00000326195 GOLGA6L1Q8N7Z2 621 aa11.7□□□□□ -0.54
ABCF1-201ENST00000326195 WDR24Q96S15 920 aa11.7□□□□□ -0.54
ABCF1-201ENST00000326195 GPBP1L1Q9HC44 474 aaPredicted RBP11.7□□□□□ -0.54
ABCF1-201ENST00000326195 CLGNO14967 610 aa11.7□□□□□ -0.54
ABCF1-201ENST00000326195 ATP8B1O43520 1251 aa11.7□□□□□ -0.54
ABCF1-201ENST00000326195 SMC2O95347 1197 aa11.7□□□□□ -0.54
ABCF1-201ENST00000326195 PLCG2P16885 1265 aa11.7□□□□□ -0.54
ABCF1-201ENST00000326195 MCM6Q14566 821 aa11.7□□□□□ -0.54
ABCF1-201ENST00000326195 LONRF2Q1L5Z9 754 aa11.7□□□□□ -0.54
ABCF1-201ENST00000326195 AKNAD1Q5T1N1 836 aa11.7□□□□□ -0.54
ABCF1-201ENST00000326195 NCOA7Q8NI08 942 aa11.7□□□□□ -0.54
ABCF1-201ENST00000326195 FAM212AQ96EL1 285 aa11.7□□□□□ -0.54
ABCF1-201ENST00000326195 ZDHHC15Q96MV8 337 aa11.7□□□□□ -0.54
ABCF1-201ENST00000326195 ZSWIM4Q9H7M6 989 aa11.7□□□□□ -0.54
ABCF1-201ENST00000326195 ARFGAP3Q9NP61 516 aa11.7□□□□□ -0.54
ABCF1-201ENST00000326195 KLF18A0A0U1RQI7 1052 aa11.7□□□□□ -0.54
ABCF1-201ENST00000326195 ERICH2A1L162 156 aa11.7□□□□□ -0.54
ABCF1-201ENST00000326195 CTAGE5O15320 804 aa11.7□□□□□ -0.54
ABCF1-201ENST00000326195 CDK8P49336 464 aa11.7□□□□□ -0.54
ABCF1-201ENST00000326195 PDE4BQ07343 736 aa11.7□□□□□ -0.54
ABCF1-201ENST00000326195 AGBL3Q8NEM8 1001 aa11.7□□□□□ -0.54
ABCF1-201ENST00000326195 DSCC1Q9BVC3 393 aa11.7□□□□□ -0.54
ABCF1-201ENST00000326195 SERPINB13Q9UIV8 391 aa11.7□□□□□ -0.54
ABCF1-201ENST00000326195 DUOX1Q9NRD9 1551 aa11.7□□□□□ -0.54
ABCF1-201ENST00000326195 SLC3A2P08195 630 aaKnown RBP11.69□□□□□ -0.54
ABCF1-201ENST00000326195 GSDMDP57764 484 aa11.69□□□□□ -0.54
ABCF1-201ENST00000326195 SCRN1Q12765 414 aa11.69□□□□□ -0.54
ABCF1-201ENST00000326195 GMLQ99445 158 aa11.69□□□□□ -0.54
ABCF1-201ENST00000326195 NBPF3Q9H094 633 aa11.69□□□□□ -0.54
ABCF1-201ENST00000326195 CXorf56Q9H5V9 222 aa11.69□□□□□ -0.54
ABCF1-201ENST00000326195 ANO10Q9NW15 660 aa11.69□□□□□ -0.54
ABCF1-201ENST00000326195 SERPINA10Q9UK55 444 aa11.69□□□□□ -0.54
ABCF1-201ENST00000326195 GLTPD2A6NH11 291 aa11.69□□□□□ -0.54
ABCF1-201ENST00000326195 CCDC172P0C7W6 258 aa11.69□□□□□ -0.54
ABCF1-201ENST00000326195 AKR1B1P15121 316 aa11.69□□□□□ -0.54
ABCF1-201ENST00000326195 GNAT2P19087 354 aa11.69□□□□□ -0.54
ABCF1-201ENST00000326195 SFPQP23246 707 aaKnown RBP eCLIP11.69□□□□□ -0.54
ABCF1-201ENST00000326195 SNAP25P60880 206 aa11.69□□□□□ -0.54
ABCF1-201ENST00000326195 HHIPL2Q6UWX4 724 aa11.69□□□□□ -0.54
ABCF1-201ENST00000326195 SH3BP5LQ7L8J4 393 aa11.69□□□□□ -0.54
ABCF1-201ENST00000326195 CEP83Q9Y592 693 aa11.69□□□□□ -0.54
ABCF1-201ENST00000326195 PHLPP2Q6ZVD8 1323 aa11.69□□□□□ -0.54
ABCF1-201ENST00000326195 GH2P01242 217 aa11.69□□□□□ -0.54
ABCF1-201ENST00000326195 INPP5BP32019 993 aa11.69□□□□□ -0.54
ABCF1-201ENST00000326195 GRIPAP1Q4V328 841 aa11.69□□□□□ -0.54
ABCF1-201ENST00000326195 LRRC31Q6UY01 552 aa11.69□□□□□ -0.54
ABCF1-201ENST00000326195 FAN1Q9Y2M0 1017 aa11.69□□□□□ -0.54
ABCF1-201ENST00000326195 PHACTR2O75167 634 aa11.68□□□□□ -0.54
ABCF1-201ENST00000326195 CORO7P57737 925 aa11.68□□□□□ -0.54
ABCF1-201ENST00000326195 SEPT2Q15019 361 aa11.68□□□□□ -0.54
ABCF1-201ENST00000326195 ISM2Q6H9L7 571 aa11.68□□□□□ -0.54
ABCF1-201ENST00000326195 LEKR1Q6ZMV7 388 aa11.68□□□□□ -0.54
ABCF1-201ENST00000326195 RSRC2Q7L4I2 434 aaKnown RBP11.68□□□□□ -0.54
ABCF1-201ENST00000326195 LLPHQ9BRT6 129 aaKnown RBP11.68□□□□□ -0.54
ABCF1-201ENST00000326195 ATP8A2Q9NTI2 1148 aa11.68□□□□□ -0.54
ABCF1-201ENST00000326195 ANGEL1Q9UNK9 670 aaKnown RBP11.68□□□□□ -0.54
ABCF1-201ENST00000326195 MAP2K7O14733 419 aa11.68□□□□□ -0.54
ABCF1-201ENST00000326195 HTRA3P83110 453 aa11.68□□□□□ -0.54
ABCF1-201ENST00000326195 DPCR1Q3MIW9 517 aa11.68□□□□□ -0.54
ABCF1-201ENST00000326195 OTUD7BQ6GQQ9 843 aa11.68□□□□□ -0.54
ABCF1-201ENST00000326195 CNKSR2Q8WXI2 1034 aa11.68□□□□□ -0.54
ABCF1-201ENST00000326195 NUP88Q99567 741 aaPredicted RBP11.68□□□□□ -0.54
ABCF1-201ENST00000326195 DEF6Q9H4E7 631 aa11.68□□□□□ -0.54
ABCF1-201ENST00000326195 TRIM75PA6NK02 468 aa11.68□□□□□ -0.54
ABCF1-201ENST00000326195 UBE2Q2LH0YL09 131 aa11.68□□□□□ -0.54
ABCF1-201ENST00000326195 CAVIN2O95810 425 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms