RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 ADCY7P51828 1080 aa8.67□□□□□ -1.02
CIITA-201ENST00000324288 HVCN1Q96D96 273 aa8.67□□□□□ -1.02
CIITA-201ENST00000324288 SPATA17Q96L03 361 aa8.67□□□□□ -1.02
CIITA-201ENST00000324288 TSC22D3Q99576 134 aa8.67□□□□□ -1.02
CIITA-201ENST00000324288 PPP2R2CQ9Y2T4 447 aa8.67□□□□□ -1.02
CIITA-201ENST00000324288 ALDH1L1O75891 902 aa8.66□□□□□ -1.02
CIITA-201ENST00000324288 GPT2Q8TD30 523 aa8.66□□□□□ -1.02
CIITA-201ENST00000324288 EXOC7Q9UPT5 735 aa8.66□□□□□ -1.02
CIITA-201ENST00000324288 FRMPD2Q68DX3 1309 aaPredicted RBP8.66□□□□□ -1.02
CIITA-201ENST00000324288 MTHFSDQ2M296 383 aaKnown RBP8.66□□□□□ -1.02
CIITA-201ENST00000324288 TPTE2Q6XPS3 522 aa8.66□□□□□ -1.02
CIITA-201ENST00000324288 EIF4A2Q14240 407 aaKnown RBP8.66□□□□□ -1.02
CIITA-201ENST00000324288 YIPF3Q9GZM5 350 aa8.66□□□□□ -1.02
CIITA-201ENST00000324288 CFBP00751 764 aa8.66□□□□□ -1.02
CIITA-201ENST00000324288 FAM47AQ5JRC9 791 aa8.66□□□□□ -1.02
CIITA-201ENST00000324288 RSBN1LQ6PCB5 846 aaPredicted RBP8.66□□□□□ -1.02
CIITA-201ENST00000324288 CYTH2Q99418 400 aa8.66□□□□□ -1.02
CIITA-201ENST00000324288 MED4Q9NPJ6 270 aa8.66□□□□□ -1.02
CIITA-201ENST00000324288 SCOCQ9UIL1 159 aa8.66□□□□□ -1.02
CIITA-201ENST00000324288 CITO14578 2027 aa8.66□□□□□ -1.02
CIITA-201ENST00000324288 KRT14P02533 472 aa8.66□□□□□ -1.02
CIITA-201ENST00000324288 MCTP2Q6DN12 878 aa8.66□□□□□ -1.02
CIITA-201ENST00000324288 MAPKAPK5Q8IW41 473 aa8.66□□□□□ -1.02
CIITA-201ENST00000324288 NLRP7Q8WX94 980 aa8.66□□□□□ -1.02
CIITA-201ENST00000324288 INTS4Q96HW7 963 aaKnown RBP8.66□□□□□ -1.02
CIITA-201ENST00000324288 RAB17Q9H0T7 212 aa8.66□□□□□ -1.02
CIITA-201ENST00000324288 NCOA1Q15788 1441 aa8.66□□□□□ -1.02
CIITA-201ENST00000324288 GUCY2CP25092 1073 aa8.66□□□□□ -1.02
CIITA-201ENST00000324288 CNGA1P29973 690 aa8.66□□□□□ -1.02
CIITA-201ENST00000324288 SLC1A4P43007 532 aa8.66□□□□□ -1.02
CIITA-201ENST00000324288 ZNF449Q6P9G9 518 aa8.66□□□□□ -1.02
CIITA-201ENST00000324288 GAS2L3Q86XJ1 694 aa8.66□□□□□ -1.02
CIITA-201ENST00000324288 ANKRD13CQ8N6S4 541 aa8.66□□□□□ -1.02
CIITA-201ENST00000324288 YY1AP1Q9H869 796 aa8.66□□□□□ -1.02
CIITA-201ENST00000324288 PRXQ9BXM0 1461 aa8.66□□□□□ -1.02
CIITA-201ENST00000324288 MAP3K21Q5TCX8 1036 aa8.66□□□□□ -1.02
CIITA-201ENST00000324288 SYCE1Q8N0S2 351 aa8.66□□□□□ -1.02
CIITA-201ENST00000324288 TGFBRAP1Q8WUH2 860 aa8.66□□□□□ -1.02
CIITA-201ENST00000324288 KRT82Q9NSB4 513 aa8.66□□□□□ -1.02
CIITA-201ENST00000324288 AMFRQ9UKV5 643 aa8.66□□□□□ -1.02
CIITA-201ENST00000324288 KCNJ18B7U540 433 aa8.66□□□□□ -1.02
CIITA-201ENST00000324288 IL2RBP14784 551 aa8.66□□□□□ -1.02
CIITA-201ENST00000324288 KCNJ12Q14500 433 aa8.66□□□□□ -1.02
CIITA-201ENST00000324288 TRMT10CQ7L0Y3 403 aaKnown RBP8.66□□□□□ -1.02
CIITA-201ENST00000324288 CLIC6Q96NY7 704 aa8.66□□□□□ -1.02
CIITA-201ENST00000324288 USP28Q96RU2 1077 aa8.66□□□□□ -1.02
CIITA-201ENST00000324288 AZI2Q9H6S1 392 aa8.66□□□□□ -1.02
CIITA-201ENST00000324288 CD109Q6YHK3 1445 aa8.66□□□□□ -1.02
CIITA-201ENST00000324288 EAPPQ56P03 285 aaPredicted RBP8.66□□□□□ -1.02
CIITA-201ENST00000324288 CCDC138Q96M89 665 aa8.66□□□□□ -1.02
CIITA-201ENST00000324288 CARD10Q9BWT7 1032 aa8.66□□□□□ -1.02
CIITA-201ENST00000324288 ANKRD2Q9GZV1 360 aa8.66□□□□□ -1.02
CIITA-201ENST00000324288 IQGAP2Q13576 1575 aa8.66□□□□□ -1.02
CIITA-201ENST00000324288 TTC41PQ6P2S7 1318 aa8.66□□□□□ -1.02
CIITA-201ENST00000324288 FLOT1O75955 427 aa8.66□□□□□ -1.02
CIITA-201ENST00000324288 YARSP54577 528 aaKnown RBP8.66□□□□□ -1.02
CIITA-201ENST00000324288 HAUS3Q68CZ6 603 aa8.66□□□□□ -1.02
CIITA-201ENST00000324288 NUP58Q9BVL2 599 aa8.66□□□□□ -1.02
CIITA-201ENST00000324288 ITGA6P23229 1130 aa8.65□□□□□ -1.02
CIITA-201ENST00000324288 P3H4Q92791 437 aa8.65□□□□□ -1.02
CIITA-201ENST00000324288 A6NNZ2 444 aa8.65□□□□□ -1.02
CIITA-201ENST00000324288 CFLARO15519 480 aa8.65□□□□□ -1.02
CIITA-201ENST00000324288 CREB3O43889 395 aa8.65□□□□□ -1.02
CIITA-201ENST00000324288 ATF2P15336 505 aa8.65□□□□□ -1.02
CIITA-201ENST00000324288 SLCO1A2P46721 670 aa8.65□□□□□ -1.02
CIITA-201ENST00000324288 TUBB8Q3ZCM7 444 aa8.65□□□□□ -1.02
CIITA-201ENST00000324288 ABCF3Q9NUQ8 709 aa8.65□□□□□ -1.02
CIITA-201ENST00000324288 DNAJC17Q9NVM6 304 aaKnown RBP8.65□□□□□ -1.02
CIITA-201ENST00000324288 VPS54Q9P1Q0 977 aa8.65□□□□□ -1.02
CIITA-201ENST00000324288 MAGI1Q96QZ7 1491 aaPredicted RBP8.65□□□□□ -1.02
CIITA-201ENST00000324288 IMPACTQ9P2X3 320 aa8.65□□□□□ -1.02
CIITA-201ENST00000324288 ENC1O14682 589 aa8.65□□□□□ -1.02
CIITA-201ENST00000324288 FAM47CQ5HY64 1035 aa8.65□□□□□ -1.02
CIITA-201ENST00000324288 SMYD3Q9H7B4 428 aa8.65□□□□□ -1.02
CIITA-201ENST00000324288 SUFUQ9UMX1 484 aa8.65□□□□□ -1.02
CIITA-201ENST00000324288 FNDC3AQ9Y2H6 1198 aaKnown RBP8.65□□□□□ -1.02
CIITA-201ENST00000324288 CDAN1Q8IWY9 1227 aa8.65□□□□□ -1.02
CIITA-201ENST00000324288 LRRC8CQ8TDW0 803 aa8.65□□□□□ -1.02
CIITA-201ENST00000324288 FAM167BQ9BTA0 163 aa8.65□□□□□ -1.02
CIITA-201ENST00000324288 KIF9Q9HAQ2 790 aa8.65□□□□□ -1.02
CIITA-201ENST00000324288 LONP1P36776 959 aaKnown RBP8.65□□□□□ -1.03
CIITA-201ENST00000324288 ART3Q13508 389 aa8.65□□□□□ -1.03
CIITA-201ENST00000324288 TRIP13Q15645 432 aaPredicted RBP8.65□□□□□ -1.03
CIITA-201ENST00000324288 PTPN22Q9Y2R2 807 aa8.65□□□□□ -1.03
CIITA-201ENST00000324288 OATP04181 439 aa8.65□□□□□ -1.03
CIITA-201ENST00000324288 ESRRGP62508 458 aa8.65□□□□□ -1.03
CIITA-201ENST00000324288 MMS19Q96T76 1030 aa8.65□□□□□ -1.03
CIITA-201ENST00000324288 PCDHB13Q9Y5F0 798 aa8.65□□□□□ -1.03
CIITA-201ENST00000324288 KDRP35968 1356 aa8.65□□□□□ -1.03
CIITA-201ENST00000324288 TTC30BQ8N4P2 665 aa8.65□□□□□ -1.03
CIITA-201ENST00000324288 SDCCAG3Q96C92 435 aa8.65□□□□□ -1.03
CIITA-201ENST00000324288 CFAP36Q96G28 342 aa8.65□□□□□ -1.03
CIITA-201ENST00000324288 BCAP29Q9UHQ4 241 aa8.65□□□□□ -1.03
CIITA-201ENST00000324288 HYOU1Q9Y4L1 999 aa8.65□□□□□ -1.03
CIITA-201ENST00000324288 SOS1Q07889 1333 aaPredicted RBP8.65□□□□□ -1.03
CIITA-201ENST00000324288 RALGAPBQ86X10 1494 aa8.64□□□□□ -1.03
CIITA-201ENST00000324288 MRC2Q9UBG0 1479 aa8.64□□□□□ -1.03
CIITA-201ENST00000324288 GSTA4O15217 222 aa8.64□□□□□ -1.03
CIITA-201ENST00000324288 GPAA1O43292 621 aa8.64□□□□□ -1.03
CIITA-201ENST00000324288 KRT3P12035 628 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms