RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 PUS3Q9BZE2 481 aaKnown RBP12.05□□□□□ -0.48
SNRNP200-201ENST00000323853 STK32BQ9NY57 414 aa12.05□□□□□ -0.48
SNRNP200-201ENST00000323853 PSDA5PKW4 1024 aaPredicted RBP12.05□□□□□ -0.48
SNRNP200-201ENST00000323853 BTBD18B2RXH4 712 aa12.05□□□□□ -0.48
SNRNP200-201ENST00000323853 FOXP1Q9H334 677 aaPredicted RBP12.05□□□□□ -0.48
SNRNP200-201ENST00000323853 NOP56O00567 594 aaKnown RBP12.04□□□□□ -0.48
SNRNP200-201ENST00000323853 GAS7O60861 476 aa12.04□□□□□ -0.48
SNRNP200-201ENST00000323853 BTDP43251 543 aa12.04□□□□□ -0.48
SNRNP200-201ENST00000323853 BUB1O43683 1085 aa12.04□□□□□ -0.48
SNRNP200-201ENST00000323853 ATP2B4P23634 1241 aa12.04□□□□□ -0.48
SNRNP200-201ENST00000323853 ODF2LQ9ULJ1 636 aa12.04□□□□□ -0.48
SNRNP200-201ENST00000323853 CUL4AQ13619 759 aa12.04□□□□□ -0.48
SNRNP200-201ENST00000323853 HHATQ5VTY9 493 aa12.04□□□□□ -0.48
SNRNP200-201ENST00000323853 HOOK2Q96ED9 719 aa12.04□□□□□ -0.48
SNRNP200-201ENST00000323853 MAGEF1Q9HAY2 307 aa12.04□□□□□ -0.48
SNRNP200-201ENST00000323853 POLR3EQ9NVU0 708 aa12.04□□□□□ -0.48
SNRNP200-201ENST00000323853 LAMC1P11047 1609 aa12.04□□□□□ -0.48
SNRNP200-201ENST00000323853 GOLGA8HP0CJ92 632 aa12.04□□□□□ -0.48
SNRNP200-201ENST00000323853 CYP2J2P51589 502 aa12.04□□□□□ -0.48
SNRNP200-201ENST00000323853 ERCC6LQ2NKX8 1250 aa12.04□□□□□ -0.48
SNRNP200-201ENST00000323853 MFSD14BQ5SR56 506 aa12.04□□□□□ -0.48
SNRNP200-201ENST00000323853 FAM102BQ5T8I3 360 aa12.04□□□□□ -0.48
SNRNP200-201ENST00000323853 DCUN1D2Q6PH85 259 aa12.04□□□□□ -0.48
SNRNP200-201ENST00000323853 OTUD6AQ7L8S5 288 aa12.04□□□□□ -0.48
SNRNP200-201ENST00000323853 CDC42BPGQ6DT37 1551 aa12.04□□□□□ -0.48
SNRNP200-201ENST00000323853 CPSF1Q10570 1443 aaKnown RBP12.04□□□□□ -0.48
SNRNP200-201ENST00000323853 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.04□□□□□ -0.48
SNRNP200-201ENST00000323853 COPB1P53618 953 aaKnown RBP12.04□□□□□ -0.48
SNRNP200-201ENST00000323853 GTF2IP78347 998 aa12.04□□□□□ -0.48
SNRNP200-201ENST00000323853 TEKT1Q969V4 418 aa12.04□□□□□ -0.48
SNRNP200-201ENST00000323853 AZI2Q9H6S1 392 aa12.04□□□□□ -0.48
SNRNP200-201ENST00000323853 PPANQ9NQ55 473 aaKnown RBP12.04□□□□□ -0.48
SNRNP200-201ENST00000323853 BUB1BO60566 1050 aaPredicted RBP12.03□□□□□ -0.48
SNRNP200-201ENST00000323853 PHKA1P46020 1223 aa12.03□□□□□ -0.48
SNRNP200-201ENST00000323853 GUCY2FP51841 1108 aa12.03□□□□□ -0.48
SNRNP200-201ENST00000323853 SLC39A14Q15043 492 aa12.03□□□□□ -0.48
SNRNP200-201ENST00000323853 PRR16Q569H4 304 aa12.03□□□□□ -0.48
SNRNP200-201ENST00000323853 RNF34Q969K3 372 aa12.03□□□□□ -0.48
SNRNP200-201ENST00000323853 PLEKHA4Q9H4M7 779 aa12.03□□□□□ -0.48
SNRNP200-201ENST00000323853 KCNK3O14649 394 aa12.03□□□□□ -0.48
SNRNP200-201ENST00000323853 DAPK3O43293 454 aa12.03□□□□□ -0.48
SNRNP200-201ENST00000323853 C11orf57Q6ZUT1 292 aaPredicted RBP12.03□□□□□ -0.48
SNRNP200-201ENST00000323853 PCDHA4Q9UN74 947 aa12.03□□□□□ -0.48
SNRNP200-201ENST00000323853 PCDHB13Q9Y5F0 798 aa12.03□□□□□ -0.48
SNRNP200-201ENST00000323853 CLTCL1P53675 1640 aa12.03□□□□□ -0.48
SNRNP200-201ENST00000323853 KLRF2D3W0D1 207 aa12.03□□□□□ -0.48
SNRNP200-201ENST00000323853 LRRC47Q8N1G4 583 aaKnown RBP12.03□□□□□ -0.48
SNRNP200-201ENST00000323853 TSC1Q92574 1164 aa12.03□□□□□ -0.48
SNRNP200-201ENST00000323853 SLAIN2Q9P270 581 aa12.03□□□□□ -0.48
SNRNP200-201ENST00000323853 CDC42BPBQ9Y5S2 1711 aa12.03□□□□□ -0.48
SNRNP200-201ENST00000323853 LAD1O00515 517 aa12.03□□□□□ -0.48
SNRNP200-201ENST00000323853 CYP21A2P08686 494 aa12.03□□□□□ -0.48
SNRNP200-201ENST00000323853 PTGDRQ13258 359 aa12.03□□□□□ -0.48
SNRNP200-201ENST00000323853 GKAP1Q5VSY0 366 aaPredicted RBP12.03□□□□□ -0.48
SNRNP200-201ENST00000323853 FBXO18Q8NFZ0 1043 aa12.03□□□□□ -0.48
SNRNP200-201ENST00000323853 N4BP1O75113 896 aaKnown RBP12.03□□□□□ -0.48
SNRNP200-201ENST00000323853 PPFIA4O75335 1185 aa12.03□□□□□ -0.48
SNRNP200-201ENST00000323853 CTNNA1P35221 906 aaKnown RBP12.03□□□□□ -0.48
SNRNP200-201ENST00000323853 NLRX1Q86UT6 975 aa12.03□□□□□ -0.48
SNRNP200-201ENST00000323853 LARGE2Q8N3Y3 721 aa12.03□□□□□ -0.48
SNRNP200-201ENST00000323853 ANTXR1Q9H6X2 564 aa12.03□□□□□ -0.48
SNRNP200-201ENST00000323853 SLC39A2Q9NP94 309 aa12.03□□□□□ -0.48
SNRNP200-201ENST00000323853 PRPF6O94906 941 aaKnown RBP12.02□□□□□ -0.48
SNRNP200-201ENST00000323853 PDE8BO95263 885 aa12.02□□□□□ -0.48
SNRNP200-201ENST00000323853 STAT1P42224 750 aa12.02□□□□□ -0.48
SNRNP200-201ENST00000323853 CPXCR1Q8N123 301 aa12.02□□□□□ -0.48
SNRNP200-201ENST00000323853 GOLGA5Q8TBA6 731 aa12.02□□□□□ -0.48
SNRNP200-201ENST00000323853 CCDC110Q8TBZ0 833 aa12.02□□□□□ -0.48
SNRNP200-201ENST00000323853 NRBP1Q9UHY1 535 aa12.02□□□□□ -0.48
SNRNP200-201ENST00000323853 FAM184BQ9ULE4 1060 aa12.02□□□□□ -0.48
SNRNP200-201ENST00000323853 KRIT1O00522 736 aa12.02□□□□□ -0.49
SNRNP200-201ENST00000323853 ZNF131P52739 623 aa12.02□□□□□ -0.49
SNRNP200-201ENST00000323853 POLR2FP61218 127 aaKnown RBP12.02□□□□□ -0.49
SNRNP200-201ENST00000323853 GRK7Q8WTQ7 553 aa12.02□□□□□ -0.49
SNRNP200-201ENST00000323853 DDX41Q9UJV9 622 aaKnown RBP12.02□□□□□ -0.49
SNRNP200-201ENST00000323853 YWHAEP62258 255 aaKnown RBP12.02□□□□□ -0.49
SNRNP200-201ENST00000323853 RDH13Q8NBN7 331 aa12.02□□□□□ -0.49
SNRNP200-201ENST00000323853 DDX23Q9BUQ8 820 aaKnown RBP12.02□□□□□ -0.49
SNRNP200-201ENST00000323853 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.02□□□□□ -0.49
SNRNP200-201ENST00000323853 HAUS4Q9H6D7 363 aa12.02□□□□□ -0.49
SNRNP200-201ENST00000323853 PCDHA12Q9UN75 941 aa12.02□□□□□ -0.49
SNRNP200-201ENST00000323853 PLA2R1Q13018 1463 aa12.02□□□□□ -0.49
SNRNP200-201ENST00000323853 IKBKBO14920 756 aa12.02□□□□□ -0.49
SNRNP200-201ENST00000323853 CRCPO75575 148 aa12.02□□□□□ -0.49
SNRNP200-201ENST00000323853 TBC1D8O95759 1140 aa12.02□□□□□ -0.49
SNRNP200-201ENST00000323853 KRT19P08727 400 aa12.02□□□□□ -0.49
SNRNP200-201ENST00000323853 POLR2MP0CAP2 368 aa12.02□□□□□ -0.49
SNRNP200-201ENST00000323853 ADD2P35612 726 aa12.02□□□□□ -0.49
SNRNP200-201ENST00000323853 GDAP1L1Q96MZ0 367 aa12.02□□□□□ -0.49
SNRNP200-201ENST00000323853 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.02□□□□□ -0.497e-8■□□□□ 11.2
SNRNP200-201ENST00000323853 ZNF215Q9UL58 517 aaPredicted RBP12.02□□□□□ -0.49
SNRNP200-201ENST00000323853 NOL3O60936 208 aaKnown RBP12.02□□□□□ -0.49
SNRNP200-201ENST00000323853 PDE6BP35913 854 aa12.02□□□□□ -0.49
SNRNP200-201ENST00000323853 VPS52Q8N1B4 723 aa12.02□□□□□ -0.49
SNRNP200-201ENST00000323853 CHURC1Q8WUH1 139 aa12.02□□□□□ -0.49
SNRNP200-201ENST00000323853 IWS1Q96ST2 819 aa12.02□□□□□ -0.49
SNRNP200-201ENST00000323853 PRAMEF22A3QJZ6 481 aa12.01□□□□□ -0.49
SNRNP200-201ENST00000323853 K7ENM7 598 aa12.01□□□□□ -0.49
SNRNP200-201ENST00000323853 TPD52P55327 224 aaPredicted RBP12.01□□□□□ -0.49
SNRNP200-201ENST00000323853 POLA2Q14181 598 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms