RNA–Protein interactions for RNA: ENST00000322310.9

SSNA1-201, Transcript of SS nuclear autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSNA1, Length 896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-201ENST00000322310 BAZ2AQ9UIF9 1905 aaKnown RBP23.61■■□□□ 1.37
SSNA1-201ENST00000322310 CHD9Q3L8U1 2897 aa23.61■■□□□ 1.37
SSNA1-201ENST00000322310 CSF2RAP15509 400 aa23.61■■□□□ 1.37
SSNA1-201ENST00000322310 PPIGQ13427 754 aaKnown RBP eCLIP23.61■■□□□ 1.37
SSNA1-201ENST00000322310 RHPN1Q8TCX5 695 aa23.61■■□□□ 1.37
SSNA1-201ENST00000322310 BCL11AQ9H165 835 aa23.61■■□□□ 1.37
SSNA1-201ENST00000322310 GOPCQ9HD26 462 aa23.61■■□□□ 1.37
SSNA1-201ENST00000322310 ATP8A2Q9NTI2 1148 aa23.61■■□□□ 1.37
SSNA1-201ENST00000322310 SYNGAP1Q96PV0 1343 aa23.6■■□□□ 1.37
SSNA1-201ENST00000322310 USP17L12C9JPN9 530 aa23.6■■□□□ 1.37
SSNA1-201ENST00000322310 USP17L21D6R901 530 aa23.6■■□□□ 1.37
SSNA1-201ENST00000322310 ADCY6O43306 1168 aa23.6■■□□□ 1.37
SSNA1-201ENST00000322310 ACRP10323 421 aa23.6■■□□□ 1.37
SSNA1-201ENST00000322310 COPB2P35606 906 aa23.6■■□□□ 1.37
SSNA1-201ENST00000322310 RASIP1Q5U651 963 aa23.6■■□□□ 1.37
SSNA1-201ENST00000322310 C16orf86Q6ZW13 317 aa23.6■■□□□ 1.37
SSNA1-201ENST00000322310 ATXN2LQ8WWM7 1075 aaKnown RBP23.6■■□□□ 1.37
SSNA1-201ENST00000322310 GLT1D1Q96MS3 346 aa23.6■■□□□ 1.37
SSNA1-201ENST00000322310 NUP88Q99567 741 aaPredicted RBP23.6■■□□□ 1.37
SSNA1-201ENST00000322310 KANSL2Q9H9L4 492 aa23.6■■□□□ 1.37
SSNA1-201ENST00000322310 RIPK3Q9Y572 518 aa23.6■■□□□ 1.37
SSNA1-201ENST00000322310 APBB1O00213 710 aa23.59■■□□□ 1.37
SSNA1-201ENST00000322310 CHGBP05060 677 aa23.59■■□□□ 1.37
SSNA1-201ENST00000322310 C6orf222P0C671 652 aaPredicted RBP23.59■■□□□ 1.37
SSNA1-201ENST00000322310 CDK7P50613 346 aa23.59■■□□□ 1.37
SSNA1-201ENST00000322310 ADGRE1Q14246 886 aa23.59■■□□□ 1.37
SSNA1-201ENST00000322310 CCDC85BQ15834 202 aaPredicted RBP23.59■■□□□ 1.37
SSNA1-201ENST00000322310 SNRNP48Q6IEG0 339 aaKnown RBP23.59■■□□□ 1.37
SSNA1-201ENST00000322310 MSL3Q8N5Y2 521 aaKnown RBP23.59■■□□□ 1.37
SSNA1-201ENST00000322310 DDX11Q96FC9 970 aa23.59■■□□□ 1.37
SSNA1-201ENST00000322310 ASB2Q96Q27 587 aa23.59■■□□□ 1.37
SSNA1-201ENST00000322310 PPP1R12CQ9BZL4 782 aa23.59■■□□□ 1.37
SSNA1-201ENST00000322310 THEGQ9P2T0 379 aa23.59■■□□□ 1.37
SSNA1-201ENST00000322310 ELP1O95163 1332 aa23.59■■□□□ 1.37
SSNA1-201ENST00000322310 MROH7Q68CQ1 1323 aa23.59■■□□□ 1.37
SSNA1-201ENST00000322310 DNAJC25-GNG10A0A024R161 153 aa23.58■■□□□ 1.37
SSNA1-201ENST00000322310 DUSP11O75319 330 aaKnown RBP23.58■■□□□ 1.37
SSNA1-201ENST00000322310 ASGR1P07306 291 aa23.58■■□□□ 1.37
SSNA1-201ENST00000322310 ADD2P35612 726 aa23.58■■□□□ 1.37
SSNA1-201ENST00000322310 SLC4A3P48751 1232 aa23.58■■□□□ 1.37
SSNA1-201ENST00000322310 AKNAD1Q5T1N1 836 aa23.58■■□□□ 1.37
SSNA1-201ENST00000322310 MAMDC4Q6UXC1 1216 aa23.58■■□□□ 1.37
SSNA1-201ENST00000322310 ZNF365Q70YC5 407 aa23.58■■□□□ 1.37
SSNA1-201ENST00000322310 ADAMTS19Q8TE59 1207 aa23.58■■□□□ 1.37
SSNA1-201ENST00000322310 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.58■■□□□ 1.37
SSNA1-201ENST00000322310 VTI1AQ96AJ9 217 aa23.58■■□□□ 1.37
SSNA1-201ENST00000322310 TEX13BQ9BXU2 312 aa23.58■■□□□ 1.37
SSNA1-201ENST00000322310 CST5P28325 142 aaPredicted RBP23.57■■□□□ 1.36
SSNA1-201ENST00000322310 CCDC174Q6PII3 467 aa23.57■■□□□ 1.36
SSNA1-201ENST00000322310 AMOTL1Q8IY63 956 aa23.57■■□□□ 1.36
SSNA1-201ENST00000322310 SLF1Q9BQI6 1058 aa23.57■■□□□ 1.36
SSNA1-201ENST00000322310 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.57■■□□□ 1.36
SSNA1-201ENST00000322310 ACVR2BQ13705 512 aa23.56■■□□□ 1.36
SSNA1-201ENST00000322310 CLASRPQ8N2M8 674 aaKnown RBP23.56■■□□□ 1.36
SSNA1-201ENST00000322310 TMEM199Q8N511 208 aa23.56■■□□□ 1.36
SSNA1-201ENST00000322310 PAG1Q9NWQ8 432 aa23.56■■□□□ 1.36
SSNA1-201ENST00000322310 ARVCFO00192 962 aa23.55■■□□□ 1.36
SSNA1-201ENST00000322310 IFIT2P09913 472 aaKnown RBP23.55■■□□□ 1.36
SSNA1-201ENST00000322310 IGFBP4P22692 258 aa23.55■■□□□ 1.36
SSNA1-201ENST00000322310 CCDC144BQ3MJ40 725 aa23.55■■□□□ 1.36
SSNA1-201ENST00000322310 HSP90AB4PQ58FF6 505 aa23.55■■□□□ 1.36
SSNA1-201ENST00000322310 PSRC1Q6PGN9 363 aaPredicted RBP23.55■■□□□ 1.36
SSNA1-201ENST00000322310 FAM126BQ8IXS8 530 aa23.55■■□□□ 1.36
SSNA1-201ENST00000322310 CPXCR1Q8N123 301 aa23.55■■□□□ 1.36
SSNA1-201ENST00000322310 PCSK9Q8NBP7 692 aaKnown RBP23.55■■□□□ 1.36
SSNA1-201ENST00000322310 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.55■■□□□ 1.36
SSNA1-201ENST00000322310 CXXC1Q9P0U4 656 aaPredicted RBP23.55■■□□□ 1.36
SSNA1-201ENST00000322310 A0A0U1RQG5 324 aaPredicted RBP23.54■■□□□ 1.36
SSNA1-201ENST00000322310 CYP2C18P33260 490 aa23.54■■□□□ 1.36
SSNA1-201ENST00000322310 MRPS5P82675 430 aaKnown RBP23.54■■□□□ 1.36
SSNA1-201ENST00000322310 GNASQ5JWF2 1037 aa23.54■■□□□ 1.36
SSNA1-201ENST00000322310 CTR9Q6PD62 1173 aa23.54■■□□□ 1.36
SSNA1-201ENST00000322310 FGD4Q96M96 766 aa23.54■■□□□ 1.36
SSNA1-201ENST00000322310 UHRF1Q96T88 793 aaPredicted RBP23.54■■□□□ 1.36
SSNA1-201ENST00000322310 UPF3AQ9H1J1 476 aaKnown RBP23.54■■□□□ 1.36
SSNA1-201ENST00000322310 NKX2-4Q9H2Z4 354 aa23.54■■□□□ 1.36
SSNA1-201ENST00000322310 BOLA2Q9H3K6 86 aa23.54■■□□□ 1.36
SSNA1-201ENST00000322310 SLC4A4Q9Y6R1 1079 aa23.54■■□□□ 1.36
SSNA1-201ENST00000322310 GJA9P57773 515 aa23.53■■□□□ 1.36
SSNA1-201ENST00000322310 ZNF467Q7Z7K2 595 aaPredicted RBP23.53■■□□□ 1.36
SSNA1-201ENST00000322310 DDRGK1Q96HY6 314 aa23.53■■□□□ 1.36
SSNA1-201ENST00000322310 SPC25Q9HBM1 224 aa23.53■■□□□ 1.36
SSNA1-201ENST00000322310 MSRAQ9UJ68 235 aa23.53■■□□□ 1.36
SSNA1-201ENST00000322310 ZBED9Q6R2W3 1325 aa23.53■■□□□ 1.36
SSNA1-201ENST00000322310 CHD7Q9P2D1 2997 aa23.52■■□□□ 1.36
SSNA1-201ENST00000322310 NDUFB10O96000 172 aa23.52■■□□□ 1.36
SSNA1-201ENST00000322310 RAB30Q15771 203 aa23.52■■□□□ 1.36
SSNA1-201ENST00000322310 STK11IPQ8N1F8 1099 aa23.52■■□□□ 1.36
SSNA1-201ENST00000322310 KIF1BPQ96EK5 621 aa23.52■■□□□ 1.36
SSNA1-201ENST00000322310 ABHD16BQ9H3Z7 469 aa23.52■■□□□ 1.36
SSNA1-201ENST00000322310 RAVER2Q9HCJ3 691 aaKnown RBP23.52■■□□□ 1.36
SSNA1-201ENST00000322310 IL23AQ9NPF7 189 aa23.52■■□□□ 1.36
SSNA1-201ENST00000322310 YBX2Q9Y2T7 364 aaKnown RBP23.52■■□□□ 1.36
SSNA1-201ENST00000322310 XIRP2A4UGR9 3374 aa23.52■■□□□ 1.36
SSNA1-201ENST00000322310 F5H6K3 240 aa23.51■■□□□ 1.35
SSNA1-201ENST00000322310 CTAGE5O15320 804 aa23.51■■□□□ 1.35
SSNA1-201ENST00000322310 TLR3O15455 904 aaKnown RBP23.51■■□□□ 1.35
SSNA1-201ENST00000322310 BEX3Q00994 111 aa23.51■■□□□ 1.35
SSNA1-201ENST00000322310 KLRC3Q07444 240 aa23.51■■□□□ 1.35
SSNA1-201ENST00000322310 ARMCX2Q7L311 632 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms