RNA–Protein interactions for RNA: ENST00000321358.11

YBX1-201, Transcript of Y-box binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene YBX1, Length 1,514 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-201ENST00000321358 TSHZ2Q9NRE2 1034 aa24.58■■□□□ 1.53
YBX1-201ENST00000321358 CTDP1Q9Y5B0 961 aaPredicted RBP24.58■■□□□ 1.53
YBX1-201ENST00000321358 PDHXO00330 501 aa24.57■■□□□ 1.52
YBX1-201ENST00000321358 SMARCA1P28370 1054 aa24.57■■□□□ 1.52
YBX1-201ENST00000321358 SCRN1Q12765 414 aa24.57■■□□□ 1.52
YBX1-201ENST00000321358 TTBK2Q6IQ55 1244 aa24.57■■□□□ 1.52
YBX1-201ENST00000321358 GPAT2Q6NUI2 795 aa24.57■■□□□ 1.52
YBX1-201ENST00000321358 TMTC3Q6ZXV5 915 aa24.57■■□□□ 1.52
YBX1-201ENST00000321358 UBA5Q9GZZ9 404 aa24.57■■□□□ 1.52
YBX1-201ENST00000321358 NID2Q14112 1375 aa24.57■■□□□ 1.52
YBX1-201ENST00000321358 MYH4Q9Y623 1939 aa24.56■■□□□ 1.52
YBX1-201ENST00000321358 AOC2O75106 756 aa24.56■■□□□ 1.52
YBX1-201ENST00000321358 LARGE1O95461 756 aa24.56■■□□□ 1.52
YBX1-201ENST00000321358 CDC27P30260 824 aa24.56■■□□□ 1.52
YBX1-201ENST00000321358 SLC16A2P36021 539 aa24.56■■□□□ 1.52
YBX1-201ENST00000321358 SYDE2Q5VT97 1194 aa24.56■■□□□ 1.52
YBX1-201ENST00000321358 BTNL9Q6UXG8 535 aa24.56■■□□□ 1.52
YBX1-201ENST00000321358 CCDC82Q8N4S0 544 aa24.56■■□□□ 1.52
YBX1-201ENST00000321358 ZCCHC17Q9NP64 241 aaKnown RBP24.56■■□□□ 1.52
YBX1-201ENST00000321358 PHIPQ8WWQ0 1821 aa24.56■■□□□ 1.52
YBX1-201ENST00000321358 TM4SF4P48230 202 aa24.56■■□□□ 1.52
YBX1-201ENST00000321358 AKAP17AQ02040 695 aaKnown RBP24.56■■□□□ 1.52
YBX1-201ENST00000321358 PTPN18Q99952 460 aa24.56■■□□□ 1.52
YBX1-201ENST00000321358 ASCC2Q9H1I8 757 aaPredicted RBP24.56■■□□□ 1.52
YBX1-201ENST00000321358 VAT1LQ9HCJ6 419 aa24.56■■□□□ 1.52
YBX1-201ENST00000321358 FAM217BQ9NTX9 383 aaPredicted RBP24.56■■□□□ 1.52
YBX1-201ENST00000321358 FBXO28Q9NVF7 368 aa24.56■■□□□ 1.52
YBX1-201ENST00000321358 PPP1R9AQ9ULJ8 1098 aa24.56■■□□□ 1.52
YBX1-201ENST00000321358 PCNTO95613 3336 aa24.55■■□□□ 1.52
YBX1-201ENST00000321358 PLEKHA8P1O95397 391 aa24.55■■□□□ 1.52
YBX1-201ENST00000321358 FDX1P10109 184 aa24.55■■□□□ 1.52
YBX1-201ENST00000321358 IFNL1Q8IU54 200 aa24.55■■□□□ 1.52
YBX1-201ENST00000321358 CCDC83Q8IWF9 413 aa24.55■■□□□ 1.52
YBX1-201ENST00000321358 FAM43AQ8N2R8 423 aa24.55■■□□□ 1.52
YBX1-201ENST00000321358 PARK7Q99497 189 aaKnown RBP24.55■■□□□ 1.52
YBX1-201ENST00000321358 SPZ1Q9BXG8 430 aa24.55■■□□□ 1.52
YBX1-201ENST00000321358 MYPNQ86TC9 1320 aa24.55■■□□□ 1.52
YBX1-201ENST00000321358 ALDH1A1P00352 501 aa24.54■■□□□ 1.52
YBX1-201ENST00000321358 TRIM22Q8IYM9 498 aa24.54■■□□□ 1.52
YBX1-201ENST00000321358 ADGRF4Q8IZF3 695 aa24.54■■□□□ 1.52
YBX1-201ENST00000321358 CMTR1Q8N1G2 835 aaKnown RBP24.54■■□□□ 1.52
YBX1-201ENST00000321358 SRBD1Q8N5C6 995 aaKnown RBP24.54■■□□□ 1.52
YBX1-201ENST00000321358 SMCR8Q8TEV9 937 aaPredicted RBP24.54■■□□□ 1.52
YBX1-201ENST00000321358 PRR12Q9ULL5 1215 aa24.54■■□□□ 1.52
YBX1-201ENST00000321358 ZBED4O75132 1171 aa24.53■■□□□ 1.52
YBX1-201ENST00000321358 HSP90AA1P07900 732 aaKnown RBP24.53■■□□□ 1.52
YBX1-201ENST00000321358 IFNAR1P17181 557 aa24.53■■□□□ 1.52
YBX1-201ENST00000321358 DSG3P32926 999 aa24.53■■□□□ 1.52
YBX1-201ENST00000321358 GTF3C2Q8WUA4 911 aaPredicted RBP24.53■■□□□ 1.52
YBX1-201ENST00000321358 RRP36Q96EU6 259 aaKnown RBP24.53■■□□□ 1.52
YBX1-201ENST00000321358 ZIC5Q96T25 663 aa24.53■■□□□ 1.52
YBX1-201ENST00000321358 LLPHQ9BRT6 129 aaKnown RBP24.53■■□□□ 1.52
YBX1-201ENST00000321358 RBM27Q9P2N5 1060 aaKnown RBP24.53■■□□□ 1.52
YBX1-201ENST00000321358 SEC63Q9UGP8 760 aaKnown RBP24.53■■□□□ 1.52
YBX1-201ENST00000321358 RBM19Q9Y4C8 960 aaKnown RBP24.53■■□□□ 1.52
YBX1-201ENST00000321358 SSRP1Q08945 709 aaKnown RBP24.52■■□□□ 1.52
YBX1-201ENST00000321358 P2RX7Q99572 595 aaKnown RBP24.52■■□□□ 1.52
YBX1-201ENST00000321358 CPVLQ9H3G5 476 aa24.52■■□□□ 1.52
YBX1-201ENST00000321358 RIOX1Q9H6W3 641 aa24.52■■□□□ 1.52
YBX1-201ENST00000321358 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.52■■□□□ 1.52
YBX1-201ENST00000321358 IGF2BP3O00425 579 aaKnown RBP eCLIP24.51■■□□□ 1.519e-6■■■□□ 18
YBX1-201ENST00000321358 MB21D1Q8N884 522 aa24.51■■□□□ 1.51
YBX1-201ENST00000321358 DAXXQ9UER7 740 aaPredicted RBP24.51■■□□□ 1.51
YBX1-201ENST00000321358 HERVK_113P62684 666 aa24.51■■□□□ 1.51
YBX1-201ENST00000321358 TAF1CQ15572 869 aaPredicted RBP24.51■■□□□ 1.51
YBX1-201ENST00000321358 NBPF11Q86T75 865 aa24.51■■□□□ 1.51
YBX1-201ENST00000321358 HOMER1Q86YM7 354 aa24.51■■□□□ 1.51
YBX1-201ENST00000321358 ATG4CQ96DT6 458 aa24.51■■□□□ 1.51
YBX1-201ENST00000321358 SLC26A6Q9BXS9 759 aa24.51■■□□□ 1.51
YBX1-201ENST00000321358 JMJD4Q9H9V9 463 aa24.51■■□□□ 1.51
YBX1-201ENST00000321358 V9GY48 417 aaPredicted RBP24.51■■□□□ 1.51
YBX1-201ENST00000321358 SPDYE16A6NNV3 312 aaPredicted RBP24.5■■□□□ 1.51
YBX1-201ENST00000321358 VWA5AO00534 786 aa24.5■■□□□ 1.51
YBX1-201ENST00000321358 CYP2C8P10632 490 aa24.5■■□□□ 1.51
YBX1-201ENST00000321358 TRAF1Q13077 416 aa24.5■■□□□ 1.51
YBX1-201ENST00000321358 NTRK3Q16288 839 aa24.5■■□□□ 1.51
YBX1-201ENST00000321358 PIBF1Q8WXW3 757 aa24.5■■□□□ 1.51
YBX1-201ENST00000321358 PHKBQ93100 1093 aa24.5■■□□□ 1.51
YBX1-201ENST00000321358 RNF26Q9BY78 433 aaPredicted RBP24.5■■□□□ 1.51
YBX1-201ENST00000321358 PNMA2Q9UL42 364 aa24.5■■□□□ 1.51
YBX1-201ENST00000321358 CYTH3O43739 400 aa24.49■■□□□ 1.51
YBX1-201ENST00000321358 GCLCP48506 637 aaPredicted RBP24.49■■□□□ 1.51
YBX1-201ENST00000321358 ZFYVE28Q9HCC9 887 aa24.49■■□□□ 1.51
YBX1-201ENST00000321358 PNMA6FA0A0J9YX94 578 aa24.48■■□□□ 1.51
YBX1-201ENST00000321358 ZBTB5O15062 677 aa24.48■■□□□ 1.51
YBX1-201ENST00000321358 HMGN5P82970 282 aaKnown RBP24.48■■□□□ 1.51
YBX1-201ENST00000321358 CDC37Q16543 378 aaPredicted RBP24.48■■□□□ 1.51
YBX1-201ENST00000321358 LBX2Q6XYB7 198 aa24.48■■□□□ 1.51
YBX1-201ENST00000321358 PIGSQ96S52 555 aa24.48■■□□□ 1.51
YBX1-201ENST00000321358 SLC38A10Q9HBR0 1119 aa24.48■■□□□ 1.51
YBX1-201ENST00000321358 CNTNAP5Q8WYK1 1306 aa24.47■■□□□ 1.51
YBX1-201ENST00000321358 PRPF3O43395 683 aaKnown RBP24.47■■□□□ 1.51
YBX1-201ENST00000321358 FMNL1O95466 1100 aaPredicted RBP24.47■■□□□ 1.51
YBX1-201ENST00000321358 FUT2Q10981 343 aa24.47■■□□□ 1.51
YBX1-201ENST00000321358 CUL4AQ13619 759 aa24.47■■□□□ 1.51
YBX1-201ENST00000321358 NSUN7Q8NE18 718 aaKnown RBP24.47■■□□□ 1.51
YBX1-201ENST00000321358 WASF1Q92558 559 aa24.47■■□□□ 1.51
YBX1-201ENST00000321358 RANBP17Q9H2T7 1088 aaKnown RBP24.47■■□□□ 1.51
YBX1-201ENST00000321358 ADAMTS5Q9UNA0 930 aa24.47■■□□□ 1.51
YBX1-201ENST00000321358 KIF3AQ9Y496 699 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms