RNA–Protein interactions for RNA: ENST00000318787.13

HDDC2-201, Transcript of HD domain containing 2, humanhuman

TSL 1 (best)

Gene HDDC2, Length 1,350 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-201ENST00000318787 ZBED4O75132 1171 aa18.97■□□□□ 0.63
HDDC2-201ENST00000318787 FARP2O94887 1054 aaPredicted RBP18.97■□□□□ 0.63
HDDC2-201ENST00000318787 SLC25A27O95847 323 aa18.97■□□□□ 0.63
HDDC2-201ENST00000318787 FCER1AP12319 257 aa18.97■□□□□ 0.63
HDDC2-201ENST00000318787 CNGA1P29973 690 aa18.97■□□□□ 0.63
HDDC2-201ENST00000318787 MFSD14CQ5VZR4 134 aa18.97■□□□□ 0.63
HDDC2-201ENST00000318787 KCTD1Q719H9 257 aa18.97■□□□□ 0.63
HDDC2-201ENST00000318787 MMP19Q99542 508 aa18.97■□□□□ 0.63
HDDC2-201ENST00000318787 ZKSCAN3Q9BRR0 538 aa18.97■□□□□ 0.63
HDDC2-201ENST00000318787 NBPF3Q9H094 633 aa18.97■□□□□ 0.63
HDDC2-201ENST00000318787 RNF41Q9H4P4 317 aaPredicted RBP18.97■□□□□ 0.63
HDDC2-201ENST00000318787 FEM1BQ9UK73 627 aa18.97■□□□□ 0.63
HDDC2-201ENST00000318787 NEDD4P46934 1319 aa18.97■□□□□ 0.63
HDDC2-201ENST00000318787 STRNO43815 780 aa18.96■□□□□ 0.63
HDDC2-201ENST00000318787 CCND3P30281 292 aaPredicted RBP18.96■□□□□ 0.63
HDDC2-201ENST00000318787 STAT2P52630 851 aa18.96■□□□□ 0.63
HDDC2-201ENST00000318787 IMMTQ16891 758 aaKnown RBP18.96■□□□□ 0.63
HDDC2-201ENST00000318787 STAG1Q8WVM7 1258 aa18.96■□□□□ 0.63
HDDC2-201ENST00000318787 RUFY2Q8WXA3 655 aa18.96■□□□□ 0.63
HDDC2-201ENST00000318787 IL25Q9H293 177 aa18.96■□□□□ 0.63
HDDC2-201ENST00000318787 RAVER2Q9HCJ3 691 aaKnown RBP18.96■□□□□ 0.63
HDDC2-201ENST00000318787 ZNF214Q9UL59 606 aaPredicted RBP18.96■□□□□ 0.63
HDDC2-201ENST00000318787 SYNPO2Q9UMS6 1093 aa18.96■□□□□ 0.63
HDDC2-201ENST00000318787 ADAMTS5Q9UNA0 930 aa18.96■□□□□ 0.63
HDDC2-201ENST00000318787 CYP2C19P33261 490 aa18.95■□□□□ 0.62
HDDC2-201ENST00000318787 KCTD2Q14681 263 aa18.95■□□□□ 0.62
HDDC2-201ENST00000318787 SKAP1Q86WV1 359 aa18.95■□□□□ 0.62
HDDC2-201ENST00000318787 RIOX2Q8IUF8 465 aa18.95■□□□□ 0.62
HDDC2-201ENST00000318787 ESR2Q92731 530 aa18.95■□□□□ 0.62
HDDC2-201ENST00000318787 DPF3Q92784 378 aa18.95■□□□□ 0.62
HDDC2-201ENST00000318787 DSCC1Q9BVC3 393 aa18.95■□□□□ 0.62
HDDC2-201ENST00000318787 TEX13BQ9BXU2 312 aa18.95■□□□□ 0.62
HDDC2-201ENST00000318787 SLC5A4Q9NY91 659 aa18.95■□□□□ 0.62
HDDC2-201ENST00000318787 PGK2P07205 417 aa18.94■□□□□ 0.62
HDDC2-201ENST00000318787 FGRP09769 529 aa18.94■□□□□ 0.62
HDDC2-201ENST00000318787 REPS2Q8NFH8 660 aa18.94■□□□□ 0.62
HDDC2-201ENST00000318787 HOMER2Q9NSB8 354 aa18.94■□□□□ 0.62
HDDC2-201ENST00000318787 CTNNA3Q9UI47 895 aa18.94■□□□□ 0.62
HDDC2-201ENST00000318787 B4E1Z4 1266 aa18.93■□□□□ 0.62
HDDC2-201ENST00000318787 COBLO75128 1261 aa18.93■□□□□ 0.62
HDDC2-201ENST00000318787 KDM4AO75164 1064 aa18.93■□□□□ 0.62
HDDC2-201ENST00000318787 CHMLP26374 656 aa18.93■□□□□ 0.62
HDDC2-201ENST00000318787 SNAP25P60880 206 aa18.93■□□□□ 0.62
HDDC2-201ENST00000318787 MAP3K21Q5TCX8 1036 aa18.93■□□□□ 0.62
HDDC2-201ENST00000318787 CENPQQ7L2Z9 268 aaPredicted RBP18.93■□□□□ 0.62
HDDC2-201ENST00000318787 CHURC1Q8WUH1 139 aa18.93■□□□□ 0.62
HDDC2-201ENST00000318787 GMCL1Q96IK5 515 aa18.93■□□□□ 0.62
HDDC2-201ENST00000318787 TMEM47Q9BQJ4 181 aa18.93■□□□□ 0.62
HDDC2-201ENST00000318787 FRMPD2Q68DX3 1309 aaPredicted RBP18.93■□□□□ 0.62
HDDC2-201ENST00000318787 RAD50Q92878 1312 aa18.93■□□□□ 0.62
HDDC2-201ENST00000318787 TOP1P11387 765 aaKnown RBP18.93■□□□□ 0.62
HDDC2-201ENST00000318787 PCP11498 1178 aaKnown RBP18.93■□□□□ 0.62
HDDC2-201ENST00000318787 COPB2P35606 906 aa18.93■□□□□ 0.62
HDDC2-201ENST00000318787 CCDC174Q6PII3 467 aa18.93■□□□□ 0.62
HDDC2-201ENST00000318787 FAM160B2Q86V87 743 aa18.93■□□□□ 0.62
HDDC2-201ENST00000318787 DIS3LQ8TF46 1054 aaKnown RBP18.93■□□□□ 0.62
HDDC2-201ENST00000318787 DDX11Q96FC9 970 aa18.93■□□□□ 0.62
HDDC2-201ENST00000318787 RIPK3Q9Y572 518 aa18.93■□□□□ 0.62
HDDC2-201ENST00000318787 ABCB7O75027 752 aa18.92■□□□□ 0.62
HDDC2-201ENST00000318787 HOXC6P09630 235 aa18.92■□□□□ 0.62
HDDC2-201ENST00000318787 RCSD1Q6JBY9 416 aa18.92■□□□□ 0.62
HDDC2-201ENST00000318787 IQCA1Q86XH1 822 aa18.92■□□□□ 0.62
HDDC2-201ENST00000318787 PAWRQ96IZ0 340 aaKnown RBP18.92■□□□□ 0.62
HDDC2-201ENST00000318787 SLC38A10Q9HBR0 1119 aa18.92■□□□□ 0.62
HDDC2-201ENST00000318787 GPCPD1Q9NPB8 672 aa18.92■□□□□ 0.62
HDDC2-201ENST00000318787 NEFLP07196 543 aa18.91■□□□□ 0.62
HDDC2-201ENST00000318787 SLC16A2P36021 539 aa18.91■□□□□ 0.62
HDDC2-201ENST00000318787 ABRAQ8N0Z2 381 aa18.91■□□□□ 0.62
HDDC2-201ENST00000318787 DCAF4Q8WV16 495 aa18.91■□□□□ 0.62
HDDC2-201ENST00000318787 MAML3Q96JK9 1138 aa18.91■□□□□ 0.62
HDDC2-201ENST00000318787 CCDC136Q96JN2 1154 aa18.91■□□□□ 0.62
HDDC2-201ENST00000318787 HTATIP2Q9BUP3 242 aa18.91■□□□□ 0.62
HDDC2-201ENST00000318787 CRISPLD2Q9H0B8 497 aa18.91■□□□□ 0.62
HDDC2-201ENST00000318787 TCP11L1Q9NUJ3 509 aa18.91■□□□□ 0.62
HDDC2-201ENST00000318787 ALPK3Q96L96 1907 aa18.9■□□□□ 0.62
HDDC2-201ENST00000318787 MCM3APO60318 1980 aa18.9■□□□□ 0.62
HDDC2-201ENST00000318787 MYH6P13533 1939 aa18.9■□□□□ 0.62
HDDC2-201ENST00000318787 PTH1RQ03431 593 aa18.9■□□□□ 0.62
HDDC2-201ENST00000318787 PRAMEF19Q5SWL8 479 aa18.9■□□□□ 0.62
HDDC2-201ENST00000318787 ANO1Q5XXA6 986 aa18.9■□□□□ 0.62
HDDC2-201ENST00000318787 TTBK2Q6IQ55 1244 aa18.9■□□□□ 0.62
HDDC2-201ENST00000318787 ANKRD35Q8N283 1001 aa18.9■□□□□ 0.62
HDDC2-201ENST00000318787 PRR12Q9ULL5 1215 aa18.9■□□□□ 0.62
HDDC2-201ENST00000318787 ALAS1P13196 640 aa18.89■□□□□ 0.61
HDDC2-201ENST00000318787 OLFML2BQ68BL8 750 aa18.89■□□□□ 0.61
HDDC2-201ENST00000318787 NECAB2Q7Z6G3 386 aa18.89■□□□□ 0.61
HDDC2-201ENST00000318787 AGBL1Q96MI9 1066 aa18.89■□□□□ 0.61
HDDC2-201ENST00000318787 KRT23Q9C075 422 aa18.89■□□□□ 0.61
HDDC2-201ENST00000318787 SMCHD1A6NHR9 2005 aa18.88■□□□□ 0.61
HDDC2-201ENST00000318787 UBAC1Q9BSL1 405 aa18.88■□□□□ 0.61
HDDC2-201ENST00000318787 KAT14Q9H8E8 782 aa18.88■□□□□ 0.61
HDDC2-201ENST00000318787 CNNM2Q9H8M5 875 aa18.88■□□□□ 0.61
HDDC2-201ENST00000318787 ZSWIM5Q9P217 1185 aa18.88■□□□□ 0.61
HDDC2-201ENST00000318787 DDX20Q9UHI6 824 aaKnown RBP18.88■□□□□ 0.61
HDDC2-201ENST00000318787 TNKSO95271 1327 aa18.87■□□□□ 0.61
HDDC2-201ENST00000318787 ATP2A1O14983 1001 aa18.87■□□□□ 0.61
HDDC2-201ENST00000318787 SGSM2O43147 1006 aa18.87■□□□□ 0.61
HDDC2-201ENST00000318787 FDX1P10109 184 aa18.87■□□□□ 0.61
HDDC2-201ENST00000318787 PDHBP11177 359 aa18.87■□□□□ 0.61
HDDC2-201ENST00000318787 CYBAP13498 195 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms