RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 BIRC3Q13489 604 aa5.33□□□□□ -1.56
PTPN13-201ENST00000316707 METTL24Q5JXM2 366 aa5.33□□□□□ -1.56
PTPN13-201ENST00000316707 SPECC1Q5M775 1068 aa5.33□□□□□ -1.56
PTPN13-201ENST00000316707 LRIG3Q6UXM1 1119 aa5.33□□□□□ -1.56
PTPN13-201ENST00000316707 EPN3Q9H201 632 aa5.33□□□□□ -1.56
PTPN13-201ENST00000316707 AGPSO00116 658 aa5.32□□□□□ -1.56
PTPN13-201ENST00000316707 ATP1A1P05023 1023 aaKnown RBP5.32□□□□□ -1.56
PTPN13-201ENST00000316707 ATP2C1P98194 919 aaPredicted RBP5.32□□□□□ -1.56
PTPN13-201ENST00000316707 LRRC24Q50LG9 513 aa5.32□□□□□ -1.56
PTPN13-201ENST00000316707 IQCKQ8N0W5 287 aa5.32□□□□□ -1.56
PTPN13-201ENST00000316707 CCHCR1Q8TD31 782 aa5.32□□□□□ -1.56
PTPN13-201ENST00000316707 CCDC114Q96M63 670 aa5.32□□□□□ -1.56
PTPN13-201ENST00000316707 NOX5Q96PH1 765 aa5.32□□□□□ -1.56
PTPN13-201ENST00000316707 ERGIC2Q96RQ1 377 aa5.32□□□□□ -1.56
PTPN13-201ENST00000316707 GRID2IPA4D2P6 1211 aa5.32□□□□□ -1.56
PTPN13-201ENST00000316707 FOXP2O15409 715 aa5.32□□□□□ -1.56
PTPN13-201ENST00000316707 SRGNP10124 158 aa5.32□□□□□ -1.56
PTPN13-201ENST00000316707 ELF1P32519 619 aa5.32□□□□□ -1.56
PTPN13-201ENST00000316707 AMPD3Q01432 767 aa5.32□□□□□ -1.56
PTPN13-201ENST00000316707 CATIPQ7Z7H3 387 aa5.32□□□□□ -1.56
PTPN13-201ENST00000316707 IFNL3Q8IZI9 196 aa5.32□□□□□ -1.56
PTPN13-201ENST00000316707 PCMTD1Q96MG8 357 aaPredicted RBP5.32□□□□□ -1.56
PTPN13-201ENST00000316707 MOV10L1Q9BXT6 1211 aaKnown RBP5.32□□□□□ -1.56
PTPN13-201ENST00000316707 BATF3Q9NR55 127 aa5.32□□□□□ -1.56
PTPN13-201ENST00000316707 CTNND2Q9UQB3 1225 aa5.32□□□□□ -1.56
PTPN13-201ENST00000316707 DIP2BQ9P265 1576 aa5.32□□□□□ -1.56
PTPN13-201ENST00000316707 MAGEA1P43355 309 aa5.32□□□□□ -1.56
PTPN13-201ENST00000316707 SATB1Q01826 763 aa5.32□□□□□ -1.56
PTPN13-201ENST00000316707 CCDC96Q2M329 555 aa5.32□□□□□ -1.56
PTPN13-201ENST00000316707 ZNF654Q8IZM8 581 aa5.32□□□□□ -1.56
PTPN13-201ENST00000316707 ATRIPQ8WXE1 791 aa5.32□□□□□ -1.56
PTPN13-201ENST00000316707 IFIH1Q9BYX4 1025 aaKnown RBP5.32□□□□□ -1.56
PTPN13-201ENST00000316707 KCNJ14Q9UNX9 436 aa5.32□□□□□ -1.56
PTPN13-201ENST00000316707 NALCNQ8IZF0 1738 aa5.32□□□□□ -1.56
PTPN13-201ENST00000316707 NRXN3Q9Y4C0 1643 aa5.32□□□□□ -1.56
PTPN13-201ENST00000316707 NR1D1P20393 614 aa5.32□□□□□ -1.56
PTPN13-201ENST00000316707 UBA7P41226 1012 aa5.32□□□□□ -1.56
PTPN13-201ENST00000316707 LDHAL6AQ6ZMR3 332 aa5.32□□□□□ -1.56
PTPN13-201ENST00000316707 TAF4BQ92750 862 aa5.32□□□□□ -1.56
PTPN13-201ENST00000316707 CAPZA3Q96KX2 299 aa5.32□□□□□ -1.56
PTPN13-201ENST00000316707 REXO2Q9Y3B8 237 aaKnown RBP5.32□□□□□ -1.56
PTPN13-201ENST00000316707 SOS2Q07890 1332 aaPredicted RBP5.32□□□□□ -1.56
PTPN13-201ENST00000316707 PDS5AQ29RF7 1337 aaKnown RBP5.32□□□□□ -1.56
PTPN13-201ENST00000316707 PNPLA7Q6ZV29 1317 aa5.32□□□□□ -1.56
PTPN13-201ENST00000316707 SSU72P8A0A1W2PR75 194 aa5.32□□□□□ -1.56
PTPN13-201ENST00000316707 CRYMQ14894 314 aa5.32□□□□□ -1.56
PTPN13-201ENST00000316707 PTPN21Q16825 1174 aa5.32□□□□□ -1.56
PTPN13-201ENST00000316707 PREPLQ4J6C6 727 aaPredicted RBP5.32□□□□□ -1.56
PTPN13-201ENST00000316707 IQCA1Q86XH1 822 aa5.32□□□□□ -1.56
PTPN13-201ENST00000316707 SGSM3Q96HU1 749 aa5.32□□□□□ -1.56
PTPN13-201ENST00000316707 ATP6V1G3Q96LB4 118 aa5.32□□□□□ -1.56
PTPN13-201ENST00000316707 NBPF3Q9H094 633 aa5.32□□□□□ -1.56
PTPN13-201ENST00000316707 ATRNO75882 1429 aa5.32□□□□□ -1.56
PTPN13-201ENST00000316707 MST1RQ04912 1400 aa5.32□□□□□ -1.56
PTPN13-201ENST00000316707 ANKRD18BA2A2Z9 1011 aa5.32□□□□□ -1.56
PTPN13-201ENST00000316707 LAD1O00515 517 aa5.32□□□□□ -1.56
PTPN13-201ENST00000316707 ENC1O14682 589 aa5.32□□□□□ -1.56
PTPN13-201ENST00000316707 TCIRG1Q13488 830 aa5.32□□□□□ -1.56
PTPN13-201ENST00000316707 ESCO1Q5FWF5 840 aa5.32□□□□□ -1.56
PTPN13-201ENST00000316707 RNF187Q5TA31 235 aaPredicted RBP5.32□□□□□ -1.56
PTPN13-201ENST00000316707 RCSD1Q6JBY9 416 aa5.32□□□□□ -1.56
PTPN13-201ENST00000316707 GRAMD1CQ8IYS0 662 aa5.32□□□□□ -1.56
PTPN13-201ENST00000316707 KAT2BQ92831 832 aa5.32□□□□□ -1.56
PTPN13-201ENST00000316707 LRRC27Q9C0I9 530 aa5.32□□□□□ -1.56
PTPN13-201ENST00000316707 KLC4Q9NSK0 619 aa5.32□□□□□ -1.56
PTPN13-201ENST00000316707 DMGDHQ9UI17 866 aaKnown RBP5.32□□□□□ -1.56
PTPN13-201ENST00000316707 ODF2LQ9ULJ1 636 aa5.32□□□□□ -1.56
PTPN13-201ENST00000316707 ARHGAP23Q9P227 1491 aa5.32□□□□□ -1.56
PTPN13-201ENST00000316707 GRIN2DO15399 1336 aa5.31□□□□□ -1.56
PTPN13-201ENST00000316707 KIF3CO14782 793 aa5.31□□□□□ -1.56
PTPN13-201ENST00000316707 RPN1P04843 607 aaKnown RBP5.31□□□□□ -1.56
PTPN13-201ENST00000316707 CD44P16070 742 aaKnown RBP5.31□□□□□ -1.56
PTPN13-201ENST00000316707 MTIF2P46199 727 aaKnown RBP5.31□□□□□ -1.56
PTPN13-201ENST00000316707 PSEN1P49768 467 aa5.31□□□□□ -1.56
PTPN13-201ENST00000316707 USP49Q70CQ1 688 aa5.31□□□□□ -1.56
PTPN13-201ENST00000316707 NUP133Q8WUM0 1156 aa5.31□□□□□ -1.56
PTPN13-201ENST00000316707 SLIT3O75094 1523 aa5.31□□□□□ -1.56
PTPN13-201ENST00000316707 ANKRD65E5RJM6 399 aa5.31□□□□□ -1.56
PTPN13-201ENST00000316707 CSF1RP07333 972 aa5.31□□□□□ -1.56
PTPN13-201ENST00000316707 CSB-PGBD3P0DP91 1061 aa5.31□□□□□ -1.56
PTPN13-201ENST00000316707 ACTN3Q08043 901 aaPredicted RBP5.31□□□□□ -1.56
PTPN13-201ENST00000316707 NR5A1Q13285 461 aa5.31□□□□□ -1.56
PTPN13-201ENST00000316707 PPP2R5EQ16537 467 aa5.31□□□□□ -1.56
PTPN13-201ENST00000316707 PTGISQ16647 500 aa5.31□□□□□ -1.56
PTPN13-201ENST00000316707 GKAP1Q5VSY0 366 aaPredicted RBP5.31□□□□□ -1.56
PTPN13-201ENST00000316707 FOXR2Q6PJQ5 311 aa5.31□□□□□ -1.56
PTPN13-201ENST00000316707 CYB5R4Q7L1T6 521 aa5.31□□□□□ -1.56
PTPN13-201ENST00000316707 CSGALNACT2Q8N6G5 542 aa5.31□□□□□ -1.56
PTPN13-201ENST00000316707 EPSTI1Q96J88 318 aa5.31□□□□□ -1.56
PTPN13-201ENST00000316707 ISCA1Q9BUE6 129 aa5.31□□□□□ -1.56
PTPN13-201ENST00000316707 EXOC1Q9NV70 894 aa5.31□□□□□ -1.56
PTPN13-201ENST00000316707 SWAP70Q9UH65 585 aa5.31□□□□□ -1.56
PTPN13-201ENST00000316707 PDCLQ13371 301 aa5.31□□□□□ -1.56
PTPN13-201ENST00000316707 CUL1Q13616 776 aa5.31□□□□□ -1.56
PTPN13-201ENST00000316707 SNCBQ16143 134 aa5.31□□□□□ -1.56
PTPN13-201ENST00000316707 CACNA2D4Q7Z3S7 1137 aa5.31□□□□□ -1.56
PTPN13-201ENST00000316707 ZNF507Q8TCN5 953 aa5.31□□□□□ -1.56
PTPN13-201ENST00000316707 HOOK2Q96ED9 719 aa5.31□□□□□ -1.56
PTPN13-201ENST00000316707 RSRC1Q96IZ7 334 aaKnown RBP5.31□□□□□ -1.56
PTPN13-201ENST00000316707 TUBGCP2Q9BSJ2 902 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms