RNA–Protein interactions for RNA: ENST00000312988.8

TUBA3E-201, Transcript of tubulin alpha 3e, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA3E, Length 1,542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3E-201ENST00000312988 CPLX2Q6PUV4 134 aaKnown RBP18.28■□□□□ 0.52
TUBA3E-201ENST00000312988 IFNL1Q8IU54 200 aa18.28■□□□□ 0.52
TUBA3E-201ENST00000312988 REM2Q8IYK8 340 aaPredicted RBP18.28■□□□□ 0.52
TUBA3E-201ENST00000312988 CCDC82Q8N4S0 544 aa18.28■□□□□ 0.52
TUBA3E-201ENST00000312988 LZTS2Q9BRK4 669 aa18.28■□□□□ 0.52
TUBA3E-201ENST00000312988 ASCC2Q9H1I8 757 aaPredicted RBP18.28■□□□□ 0.52
TUBA3E-201ENST00000312988 CPVLQ9H3G5 476 aa18.28■□□□□ 0.52
TUBA3E-201ENST00000312988 VAT1LQ9HCJ6 419 aa18.28■□□□□ 0.52
TUBA3E-201ENST00000312988 CTDP1Q9Y5B0 961 aaPredicted RBP18.28■□□□□ 0.52
TUBA3E-201ENST00000312988 ADD1P35611 737 aaKnown RBP18.27■□□□□ 0.51
TUBA3E-201ENST00000312988 TM4SF4P48230 202 aa18.27■□□□□ 0.51
TUBA3E-201ENST00000312988 SCRN1Q12765 414 aa18.27■□□□□ 0.51
TUBA3E-201ENST00000312988 COG2Q14746 738 aa18.27■□□□□ 0.51
TUBA3E-201ENST00000312988 TMTC3Q6ZXV5 915 aa18.27■□□□□ 0.51
TUBA3E-201ENST00000312988 CMTR1Q8N1G2 835 aaKnown RBP18.27■□□□□ 0.51
TUBA3E-201ENST00000312988 PPP1R9AQ9ULJ8 1098 aa18.27■□□□□ 0.51
TUBA3E-201ENST00000312988 SLC45A1Q9Y2W3 748 aa18.27■□□□□ 0.51
TUBA3E-201ENST00000312988 NID2Q14112 1375 aa18.27■□□□□ 0.51
TUBA3E-201ENST00000312988 CCDC83Q8IWF9 413 aa18.26■□□□□ 0.51
TUBA3E-201ENST00000312988 PRPF38AQ8NAV1 312 aaKnown RBP18.26■□□□□ 0.51
TUBA3E-201ENST00000312988 SMCR8Q8TEV9 937 aaPredicted RBP18.26■□□□□ 0.51
TUBA3E-201ENST00000312988 GTF3C6Q969F1 213 aa18.26■□□□□ 0.51
TUBA3E-201ENST00000312988 SNX21Q969T3 373 aa18.26■□□□□ 0.51
TUBA3E-201ENST00000312988 TMX3Q96JJ7 454 aa18.26■□□□□ 0.51
TUBA3E-201ENST00000312988 PARK7Q99497 189 aaKnown RBP18.26■□□□□ 0.51
TUBA3E-201ENST00000312988 P2RX7Q99572 595 aaKnown RBP18.26■□□□□ 0.51
TUBA3E-201ENST00000312988 FAM217BQ9NTX9 383 aaPredicted RBP18.26■□□□□ 0.51
TUBA3E-201ENST00000312988 HOXC10Q9NYD6 342 aa18.26■□□□□ 0.51
TUBA3E-201ENST00000312988 PRR12Q9ULL5 1215 aa18.26■□□□□ 0.51
TUBA3E-201ENST00000312988 PLA2G6O60733 806 aa18.25■□□□□ 0.51
TUBA3E-201ENST00000312988 CYP2C8P10632 490 aa18.25■□□□□ 0.51
TUBA3E-201ENST00000312988 DSG3P32926 999 aa18.25■□□□□ 0.51
TUBA3E-201ENST00000312988 TAF1CQ15572 869 aaPredicted RBP18.25■□□□□ 0.51
TUBA3E-201ENST00000312988 BTNL9Q6UXG8 535 aa18.25■□□□□ 0.51
TUBA3E-201ENST00000312988 ADGRF4Q8IZF3 695 aa18.25■□□□□ 0.51
TUBA3E-201ENST00000312988 SRBD1Q8N5C6 995 aaKnown RBP18.25■□□□□ 0.51
TUBA3E-201ENST00000312988 PIBF1Q8WXW3 757 aa18.25■□□□□ 0.51
TUBA3E-201ENST00000312988 ATG4CQ96DT6 458 aa18.25■□□□□ 0.51
TUBA3E-201ENST00000312988 ZCCHC17Q9NP64 241 aaKnown RBP18.25■□□□□ 0.51
TUBA3E-201ENST00000312988 TSHZ2Q9NRE2 1034 aa18.25■□□□□ 0.51
TUBA3E-201ENST00000312988 K7ELQ4 463 aaPredicted RBP18.24■□□□□ 0.51
TUBA3E-201ENST00000312988 MYPNQ86TC9 1320 aa18.24■□□□□ 0.51
TUBA3E-201ENST00000312988 SPDYE16A6NNV3 312 aaPredicted RBP18.23■□□□□ 0.51
TUBA3E-201ENST00000312988 ZBED4O75132 1171 aa18.23■□□□□ 0.51
TUBA3E-201ENST00000312988 PPFIA3O75145 1194 aa18.23■□□□□ 0.51
TUBA3E-201ENST00000312988 CDKL5O76039 1030 aa18.23■□□□□ 0.51
TUBA3E-201ENST00000312988 ALDH1A1P00352 501 aa18.23■□□□□ 0.51
TUBA3E-201ENST00000312988 ANP32AP39687 249 aaKnown RBP18.23■□□□□ 0.51
TUBA3E-201ENST00000312988 SNAP25P60880 206 aa18.23■□□□□ 0.51
TUBA3E-201ENST00000312988 HERVK_113P62684 666 aa18.23■□□□□ 0.51
TUBA3E-201ENST00000312988 AKAP17AQ02040 695 aaKnown RBP18.23■□□□□ 0.51
TUBA3E-201ENST00000312988 NBPF11Q86T75 865 aa18.23■□□□□ 0.51
TUBA3E-201ENST00000312988 HOMER1Q86YM7 354 aa18.23■□□□□ 0.51
TUBA3E-201ENST00000312988 SPZ1Q9BXG8 430 aa18.23■□□□□ 0.51
TUBA3E-201ENST00000312988 BAZ2BQ9UIF8 2168 aaKnown RBP18.23■□□□□ 0.51
TUBA3E-201ENST00000312988 BECN1Q14457 450 aa18.23■□□□□ 0.51
TUBA3E-201ENST00000312988 CCDC174Q6PII3 467 aa18.23■□□□□ 0.51
TUBA3E-201ENST00000312988 RRP36Q96EU6 259 aaKnown RBP18.23■□□□□ 0.51
TUBA3E-201ENST00000312988 PAGR1Q9BTK6 254 aa18.23■□□□□ 0.51
TUBA3E-201ENST00000312988 JMJD4Q9H9V9 463 aa18.23■□□□□ 0.51
TUBA3E-201ENST00000312988 ZFYVE28Q9HCC9 887 aa18.23■□□□□ 0.51
TUBA3E-201ENST00000312988 SEC63Q9UGP8 760 aaKnown RBP18.23■□□□□ 0.51
TUBA3E-201ENST00000312988 CNTNAP5Q8WYK1 1306 aa18.22■□□□□ 0.51
TUBA3E-201ENST00000312988 VWA5AO00534 786 aa18.22■□□□□ 0.51
TUBA3E-201ENST00000312988 CYTH3O43739 400 aa18.22■□□□□ 0.51
TUBA3E-201ENST00000312988 SMARCA1P28370 1054 aa18.22■□□□□ 0.51
TUBA3E-201ENST00000312988 SSRP1Q08945 709 aaKnown RBP18.22■□□□□ 0.51
TUBA3E-201ENST00000312988 CDC37Q16543 378 aaPredicted RBP18.22■□□□□ 0.51
TUBA3E-201ENST00000312988 TRIM22Q8IYM9 498 aa18.22■□□□□ 0.51
TUBA3E-201ENST00000312988 GTF3C2Q8WUA4 911 aaPredicted RBP18.22■□□□□ 0.51
TUBA3E-201ENST00000312988 PHKBQ93100 1093 aa18.22■□□□□ 0.51
TUBA3E-201ENST00000312988 SLC26A6Q9BXS9 759 aa18.22■□□□□ 0.51
TUBA3E-201ENST00000312988 RIOX1Q9H6W3 641 aa18.22■□□□□ 0.51
TUBA3E-201ENST00000312988 hCG_1642624A0A1W2PR95 340 aa18.21■□□□□ 0.51
TUBA3E-201ENST00000312988 FDX1P10109 184 aa18.21■□□□□ 0.51
TUBA3E-201ENST00000312988 IFNAR1P17181 557 aa18.21■□□□□ 0.51
TUBA3E-201ENST00000312988 SLC4A3P48751 1232 aa18.21■□□□□ 0.51
TUBA3E-201ENST00000312988 ST3GAL1Q11201 340 aa18.21■□□□□ 0.51
TUBA3E-201ENST00000312988 PLS1Q14651 629 aa18.21■□□□□ 0.51
TUBA3E-201ENST00000312988 SLC35G1Q2M3R5 365 aa18.21■□□□□ 0.51
TUBA3E-201ENST00000312988 CPXCR1Q8N123 301 aa18.21■□□□□ 0.51
TUBA3E-201ENST00000312988 MB21D1Q8N884 522 aa18.21■□□□□ 0.51
TUBA3E-201ENST00000312988 PIGSQ96S52 555 aa18.21■□□□□ 0.51
TUBA3E-201ENST00000312988 V9GY48 417 aaPredicted RBP18.21■□□□□ 0.51
TUBA3E-201ENST00000312988 THSD7BQ9C0I4 1608 aa18.2■□□□□ 0.5
TUBA3E-201ENST00000312988 DTNBO60941 627 aa18.2■□□□□ 0.5
TUBA3E-201ENST00000312988 HSP90AA1P07900 732 aaKnown RBP18.2■□□□□ 0.5
TUBA3E-201ENST00000312988 GCLCP48506 637 aaPredicted RBP18.2■□□□□ 0.5
TUBA3E-201ENST00000312988 FUT2Q10981 343 aa18.2■□□□□ 0.5
TUBA3E-201ENST00000312988 NTRK3Q16288 839 aa18.2■□□□□ 0.5
TUBA3E-201ENST00000312988 RANBP17Q9H2T7 1088 aaKnown RBP18.2■□□□□ 0.5
TUBA3E-201ENST00000312988 SLC38A10Q9HBR0 1119 aa18.2■□□□□ 0.5
TUBA3E-201ENST00000312988 PARP14Q460N5 1801 aa18.2■□□□□ 0.5
TUBA3E-201ENST00000312988 RLFQ13129 1914 aa18.2■□□□□ 0.5
TUBA3E-201ENST00000312988 PTPDC1A2A3K4 754 aa18.19■□□□□ 0.5
TUBA3E-201ENST00000312988 ZBTB5O15062 677 aa18.19■□□□□ 0.5
TUBA3E-201ENST00000312988 CA12O43570 354 aa18.19■□□□□ 0.5
TUBA3E-201ENST00000312988 CRHR2Q13324 411 aa18.19■□□□□ 0.5
TUBA3E-201ENST00000312988 QRICH1Q2TAL8 776 aa18.19■□□□□ 0.5
TUBA3E-201ENST00000312988 LBX2Q6XYB7 198 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms