RNA–Protein interactions for RNA: ENST00000310169.2

CHRNA9-201, Transcript of cholinergic receptor nicotinic alpha 9 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA9, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9-201ENST00000310169 CCAR1Q8IX12 1150 aaKnown RBP11.4□□□□□ -0.58
CHRNA9-201ENST00000310169 GMCL1P1Q8NEA9 526 aa11.4□□□□□ -0.58
CHRNA9-201ENST00000310169 NKX2-3Q8TAU0 364 aa11.4□□□□□ -0.58
CHRNA9-201ENST00000310169 GTF3C2Q8WUA4 911 aaPredicted RBP11.4□□□□□ -0.58
CHRNA9-201ENST00000310169 INTS4Q96HW7 963 aaKnown RBP11.4□□□□□ -0.58
CHRNA9-201ENST00000310169 NUP88Q99567 741 aaPredicted RBP11.4□□□□□ -0.58
CHRNA9-201ENST00000310169 TMEM47Q9BQJ4 181 aa11.4□□□□□ -0.58
CHRNA9-201ENST00000310169 PAGR1Q9BTK6 254 aa11.4□□□□□ -0.58
CHRNA9-201ENST00000310169 USP26Q9BXU7 913 aa11.4□□□□□ -0.58
CHRNA9-201ENST00000310169 IKQ13123 557 aaPredicted RBP11.4□□□□□ -0.58
CHRNA9-201ENST00000310169 CD99L2Q8TCZ2 262 aa11.4□□□□□ -0.58
CHRNA9-201ENST00000310169 KAT14Q9H8E8 782 aa11.4□□□□□ -0.58
CHRNA9-201ENST00000310169 TNKSO95271 1327 aa11.4□□□□□ -0.59
CHRNA9-201ENST00000310169 IFIT3O14879 490 aaKnown RBP11.39□□□□□ -0.59
CHRNA9-201ENST00000310169 BCRP11274 1271 aa11.39□□□□□ -0.59
CHRNA9-201ENST00000310169 BMP3P12645 472 aa11.39□□□□□ -0.59
CHRNA9-201ENST00000310169 LACTBP83111 547 aaPredicted RBP11.39□□□□□ -0.59
CHRNA9-201ENST00000310169 FAM110CQ1W6H9 321 aa11.39□□□□□ -0.59
CHRNA9-201ENST00000310169 IFIT1BQ5T764 474 aaKnown RBP11.39□□□□□ -0.59
CHRNA9-201ENST00000310169 STOX1Q6ZVD7 989 aa11.39□□□□□ -0.59
CHRNA9-201ENST00000310169 CHST3Q7LGC8 479 aa11.39□□□□□ -0.59
CHRNA9-201ENST00000310169 GPRC5AQ8NFJ5 357 aa11.39□□□□□ -0.59
CHRNA9-201ENST00000310169 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.39□□□□□ -0.59
CHRNA9-201ENST00000310169 LETM1O95202 739 aaPredicted RBP11.39□□□□□ -0.59
CHRNA9-201ENST00000310169 CD2BP2O95400 341 aaKnown RBP11.39□□□□□ -0.59
CHRNA9-201ENST00000310169 FMNL1O95466 1100 aaPredicted RBP11.39□□□□□ -0.59
CHRNA9-201ENST00000310169 NCLP19338 710 aaKnown RBP11.39□□□□□ -0.59
CHRNA9-201ENST00000310169 ANAPC15P60006 121 aa11.39□□□□□ -0.59
CHRNA9-201ENST00000310169 KRT32Q14532 448 aa11.39□□□□□ -0.59
CHRNA9-201ENST00000310169 COL13A1Q5TAT6 717 aaPredicted RBP11.39□□□□□ -0.59
CHRNA9-201ENST00000310169 CYB5R4Q7L1T6 521 aa11.39□□□□□ -0.59
CHRNA9-201ENST00000310169 ENAHQ8N8S7 591 aaPredicted RBP11.39□□□□□ -0.59
CHRNA9-201ENST00000310169 EFCC1Q9HA90 598 aa11.39□□□□□ -0.59
CHRNA9-201ENST00000310169 TRIM17Q9Y577 477 aa11.39□□□□□ -0.59
CHRNA9-201ENST00000310169 CTDP1Q9Y5B0 961 aaPredicted RBP11.39□□□□□ -0.59
CHRNA9-201ENST00000310169 ADGRA2Q96PE1 1338 aa11.38□□□□□ -0.59
CHRNA9-201ENST00000310169 UQCRHLA0A096LP55 91 aa11.38□□□□□ -0.59
CHRNA9-201ENST00000310169 SPDYE16A6NNV3 312 aaPredicted RBP11.38□□□□□ -0.59
CHRNA9-201ENST00000310169 TPM3P06753 285 aa11.38□□□□□ -0.59
CHRNA9-201ENST00000310169 UQCRHP07919 91 aa11.38□□□□□ -0.59
CHRNA9-201ENST00000310169 PSMC4P43686 418 aa11.38□□□□□ -0.59
CHRNA9-201ENST00000310169 NOVP48745 357 aa11.38□□□□□ -0.59
CHRNA9-201ENST00000310169 CCDC96Q2M329 555 aa11.38□□□□□ -0.59
CHRNA9-201ENST00000310169 RCSD1Q6JBY9 416 aa11.38□□□□□ -0.59
CHRNA9-201ENST00000310169 GMCL1Q96IK5 515 aa11.38□□□□□ -0.59
CHRNA9-201ENST00000310169 RBSNQ9H1K0 784 aa11.38□□□□□ -0.59
CHRNA9-201ENST00000310169 FBXO28Q9NVF7 368 aa11.38□□□□□ -0.59
CHRNA9-201ENST00000310169 RBPJLQ9UBG7 517 aa11.38□□□□□ -0.59
CHRNA9-201ENST00000310169 RABGAP1Q9Y3P9 1069 aa11.38□□□□□ -0.59
CHRNA9-201ENST00000310169 TMEM232C9JQI7 657 aa11.38□□□□□ -0.59
CHRNA9-201ENST00000310169 DSG3P32926 999 aa11.38□□□□□ -0.59
CHRNA9-201ENST00000310169 FCGRTP55899 365 aa11.38□□□□□ -0.59
CHRNA9-201ENST00000310169 PLS1Q14651 629 aa11.38□□□□□ -0.59
CHRNA9-201ENST00000310169 WTAPQ15007 396 aa11.38□□□□□ -0.59
CHRNA9-201ENST00000310169 TMEM67Q5HYA8 995 aa11.38□□□□□ -0.59
CHRNA9-201ENST00000310169 MCTP1Q6DN14 999 aa11.38□□□□□ -0.59
CHRNA9-201ENST00000310169 CAVIN1Q6NZI2 390 aaKnown RBP11.38□□□□□ -0.59
CHRNA9-201ENST00000310169 KCTD1Q719H9 257 aa11.38□□□□□ -0.59
CHRNA9-201ENST00000310169 CTU1Q7Z7A3 348 aaKnown RBP11.38□□□□□ -0.59
CHRNA9-201ENST00000310169 PRPF38AQ8NAV1 312 aaKnown RBP11.38□□□□□ -0.59
CHRNA9-201ENST00000310169 PNMA1Q8ND90 353 aa11.38□□□□□ -0.59
CHRNA9-201ENST00000310169 CHURC1Q8WUH1 139 aa11.38□□□□□ -0.59
CHRNA9-201ENST00000310169 KIFC2Q96AC6 838 aa11.38□□□□□ -0.59
CHRNA9-201ENST00000310169 NEK1Q96PY6 1258 aa11.38□□□□□ -0.59
CHRNA9-201ENST00000310169 SLF1Q9BQI6 1058 aa11.38□□□□□ -0.59
CHRNA9-201ENST00000310169 FEM1BQ9UK73 627 aa11.38□□□□□ -0.59
CHRNA9-201ENST00000310169 PEX10O60683 326 aa11.37□□□□□ -0.59
CHRNA9-201ENST00000310169 HOXD10P28358 340 aa11.37□□□□□ -0.59
CHRNA9-201ENST00000310169 HSPA4P34932 840 aa11.37□□□□□ -0.59
CHRNA9-201ENST00000310169 STAT2P52630 851 aa11.37□□□□□ -0.59
CHRNA9-201ENST00000310169 ERVK-9P63128 1117 aa11.37□□□□□ -0.59
CHRNA9-201ENST00000310169 ERVK-24P63145 666 aa11.37□□□□□ -0.59
CHRNA9-201ENST00000310169 CCNA1P78396 465 aa11.37□□□□□ -0.59
CHRNA9-201ENST00000310169 CUL4AQ13619 759 aa11.37□□□□□ -0.59
CHRNA9-201ENST00000310169 WDR78Q5VTH9 848 aa11.37□□□□□ -0.59
CHRNA9-201ENST00000310169 RASEFQ8IZ41 740 aa11.37□□□□□ -0.59
CHRNA9-201ENST00000310169 MB21D1Q8N884 522 aa11.37□□□□□ -0.59
CHRNA9-201ENST00000310169 MYRIPQ8NFW9 859 aa11.37□□□□□ -0.59
CHRNA9-201ENST00000310169 DCAF4Q8WV16 495 aa11.37□□□□□ -0.59
CHRNA9-201ENST00000310169 ATG4CQ96DT6 458 aa11.37□□□□□ -0.59
CHRNA9-201ENST00000310169 CCDC94Q9BW85 323 aaPredicted RBP11.37□□□□□ -0.59
CHRNA9-201ENST00000310169 ARHGAP39Q9C0H5 1083 aa11.37□□□□□ -0.59
CHRNA9-201ENST00000310169 TXNRD2Q9NNW7 524 aa11.37□□□□□ -0.59
CHRNA9-201ENST00000310169 PPP1R9AQ9ULJ8 1098 aa11.37□□□□□ -0.59
CHRNA9-201ENST00000310169 MYPNQ86TC9 1320 aa11.37□□□□□ -0.59
CHRNA9-201ENST00000310169 DOCK3Q8IZD9 2030 aa11.37□□□□□ -0.59
CHRNA9-201ENST00000310169 TNPO2O14787 897 aaKnown RBP11.37□□□□□ -0.59
CHRNA9-201ENST00000310169 PRC1O43663 620 aa11.37□□□□□ -0.59
CHRNA9-201ENST00000310169 Q3C1V9 767 aa11.37□□□□□ -0.59
CHRNA9-201ENST00000310169 LBX2Q6XYB7 198 aa11.37□□□□□ -0.59
CHRNA9-201ENST00000310169 MB21D2Q8IYB1 491 aaPredicted RBP11.37□□□□□ -0.59
CHRNA9-201ENST00000310169 TMEM87AQ8NBN3 555 aa11.37□□□□□ -0.59
CHRNA9-201ENST00000310169 ANKS1AQ92625 1134 aa11.37□□□□□ -0.59
CHRNA9-201ENST00000310169 MORF4L1Q9UBU8 362 aa11.37□□□□□ -0.59
CHRNA9-201ENST00000310169 R3HCC1Q9Y3T6 440 aaKnown RBP11.37□□□□□ -0.59
CHRNA9-201ENST00000310169 HTTP42858 3142 aa11.36□□□□□ -0.59
CHRNA9-201ENST00000310169 HMGB1P09429 215 aaKnown RBP11.36□□□□□ -0.59
CHRNA9-201ENST00000310169 PDHBP11177 359 aa11.36□□□□□ -0.59
CHRNA9-201ENST00000310169 CHRM1P11229 460 aaPredicted RBP11.36□□□□□ -0.59
CHRNA9-201ENST00000310169 TSGA10IPQ3SY00 556 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms