RNA–Protein interactions for RNA: ENST00000309263.7

SCUBE2-201, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 5 BASIC

Gene SCUBE2, Length 3,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-201ENST00000309263 HPCAL4Q9UM19 191 aa16.12■□□□□ 0.17
SCUBE2-201ENST00000309263 COL16A1Q07092 1604 aaPredicted RBP16.12■□□□□ 0.17
SCUBE2-201ENST00000309263 PPFIA4O75335 1185 aa16.12■□□□□ 0.17
SCUBE2-201ENST00000309263 SYF2O95926 243 aaKnown RBP16.12■□□□□ 0.17
SCUBE2-201ENST00000309263 RPN1P04843 607 aaKnown RBP16.12■□□□□ 0.17
SCUBE2-201ENST00000309263 NGLY1Q96IV0 654 aa16.12■□□□□ 0.17
SCUBE2-201ENST00000309263 EFCC1Q9HA90 598 aa16.12■□□□□ 0.17
SCUBE2-201ENST00000309263 GNGT1P63211 74 aa16.12■□□□□ 0.17
SCUBE2-201ENST00000309263 PUM3Q15397 648 aaKnown RBP16.12■□□□□ 0.17
SCUBE2-201ENST00000309263 IQCA1Q86XH1 822 aa16.12■□□□□ 0.17
SCUBE2-201ENST00000309263 RNF41Q9H4P4 317 aaPredicted RBP16.12■□□□□ 0.17
SCUBE2-201ENST00000309263 CAMTA1Q9Y6Y1 1673 aa16.12■□□□□ 0.17
SCUBE2-201ENST00000309263 VEGFAP15692 232 aaPredicted RBP16.11■□□□□ 0.17
SCUBE2-201ENST00000309263 NOP2P46087 812 aaKnown RBP16.11■□□□□ 0.17
SCUBE2-201ENST00000309263 KIF5AQ12840 1032 aa16.11■□□□□ 0.17
SCUBE2-201ENST00000309263 SPA17Q15506 151 aa16.11■□□□□ 0.17
SCUBE2-201ENST00000309263 GPKOWQ92917 476 aaPredicted RBP eCLIP16.11■□□□□ 0.17
SCUBE2-201ENST00000309263 C8orf37Q96NL8 207 aa16.11■□□□□ 0.17
SCUBE2-201ENST00000309263 UIMC1Q96RL1 719 aa16.11■□□□□ 0.17
SCUBE2-201ENST00000309263 HAUS4Q9H6D7 363 aa16.11■□□□□ 0.17
SCUBE2-201ENST00000309263 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.11■□□□□ 0.17
SCUBE2-201ENST00000309263 REXO2Q9Y3B8 237 aaKnown RBP16.11■□□□□ 0.17
SCUBE2-201ENST00000309263 RGPD5Q99666 1765 aa16.11■□□□□ 0.17
SCUBE2-201ENST00000309263 PLEKHG2Q9H7P9 1386 aa16.11■□□□□ 0.17
SCUBE2-201ENST00000309263 LMO7Q8WWI1 1683 aa16.11■□□□□ 0.17
SCUBE2-201ENST00000309263 TUBB2AQ13885 445 aa16.11■□□□□ 0.17
SCUBE2-201ENST00000309263 MEX3CQ5U5Q3 659 aaKnown RBP16.11■□□□□ 0.17
SCUBE2-201ENST00000309263 TYW1BQ6NUM6 668 aa16.11■□□□□ 0.17
SCUBE2-201ENST00000309263 TMTC2Q8N394 836 aa16.11■□□□□ 0.17
SCUBE2-201ENST00000309263 CTCFLQ8NI51 663 aaPredicted RBP16.11■□□□□ 0.17
SCUBE2-201ENST00000309263 COG1Q8WTW3 980 aa16.11■□□□□ 0.17
SCUBE2-201ENST00000309263 HDAC7Q8WUI4 952 aa16.11■□□□□ 0.17
SCUBE2-201ENST00000309263 RRP36Q96EU6 259 aaKnown RBP16.11■□□□□ 0.17
SCUBE2-201ENST00000309263 TUBB2BQ9BVA1 445 aa16.11■□□□□ 0.17
SCUBE2-201ENST00000309263 STK36Q9NRP7 1315 aa16.11■□□□□ 0.17
SCUBE2-201ENST00000309263 SHTN1A0MZ66 631 aa16.11■□□□□ 0.17
SCUBE2-201ENST00000309263 PMS1P54277 932 aaKnown RBP16.11■□□□□ 0.17
SCUBE2-201ENST00000309263 ATP2B2Q01814 1243 aa16.11■□□□□ 0.17
SCUBE2-201ENST00000309263 IFT81Q8WYA0 676 aa16.11■□□□□ 0.17
SCUBE2-201ENST00000309263 CCDC42Q96M95 316 aa16.11■□□□□ 0.17
SCUBE2-201ENST00000309263 ERLIN2O94905 339 aa16.1■□□□□ 0.17
SCUBE2-201ENST00000309263 STARD3NLO95772 234 aa16.1■□□□□ 0.17
SCUBE2-201ENST00000309263 PBX1P40424 430 aa16.1■□□□□ 0.17
SCUBE2-201ENST00000309263 UBA7P41226 1012 aa16.1■□□□□ 0.17
SCUBE2-201ENST00000309263 FBXW10Q5XX13 1052 aa16.1■□□□□ 0.17
SCUBE2-201ENST00000309263 CSGALNACT2Q8N6G5 542 aa16.1■□□□□ 0.17
SCUBE2-201ENST00000309263 LPIN2Q92539 896 aa16.1■□□□□ 0.17
SCUBE2-201ENST00000309263 FERMT2Q96AC1 680 aa16.1■□□□□ 0.17
SCUBE2-201ENST00000309263 FAM207AQ9NSI2 230 aaPredicted RBP16.1■□□□□ 0.17
SCUBE2-201ENST00000309263 OVOS2A0A0G2JMS6 1433 aa16.1■□□□□ 0.17
SCUBE2-201ENST00000309263 CYLC1P35663 651 aaPredicted RBP16.1■□□□□ 0.17
SCUBE2-201ENST00000309263 LRWD1Q9UFC0 647 aa16.1■□□□□ 0.17
SCUBE2-201ENST00000309263 MYH8P13535 1937 aa16.1■□□□□ 0.17
SCUBE2-201ENST00000309263 PDE2AO00408 941 aaPredicted RBP16.1■□□□□ 0.17
SCUBE2-201ENST00000309263 NLRP10Q86W26 655 aa16.1■□□□□ 0.17
SCUBE2-201ENST00000309263 ANKRD18AQ8IVF6 992 aa16.1■□□□□ 0.17
SCUBE2-201ENST00000309263 ENAHQ8N8S7 591 aaPredicted RBP16.1■□□□□ 0.17
SCUBE2-201ENST00000309263 SHISA4Q96DD7 197 aa16.1■□□□□ 0.17
SCUBE2-201ENST00000309263 C5P01031 1676 aa16.1■□□□□ 0.17
SCUBE2-201ENST00000309263 RCCD1A6NED2 376 aa16.09■□□□□ 0.17
SCUBE2-201ENST00000309263 DYNLL1P63167 89 aaKnown RBP16.09■□□□□ 0.17
SCUBE2-201ENST00000309263 KRT83P78385 493 aa16.09■□□□□ 0.17
SCUBE2-201ENST00000309263 CKAP4Q07065 602 aaKnown RBP16.09■□□□□ 0.17
SCUBE2-201ENST00000309263 PTPROQ16827 1216 aa16.09■□□□□ 0.17
SCUBE2-201ENST00000309263 CARD10Q9BWT7 1032 aa16.09■□□□□ 0.17
SCUBE2-201ENST00000309263 AKR1B10O60218 316 aa16.09■□□□□ 0.17
SCUBE2-201ENST00000309263 PLEKP08567 350 aaPredicted RBP16.09■□□□□ 0.17
SCUBE2-201ENST00000309263 CORO7P57737 925 aa16.09■□□□□ 0.17
SCUBE2-201ENST00000309263 TANGO6Q9C0B7 1094 aa16.09■□□□□ 0.17
SCUBE2-201ENST00000309263 MMRN2Q9H8L6 949 aa16.09■□□□□ 0.17
SCUBE2-201ENST00000309263 RWDD2AQ9UIY3 292 aa16.09■□□□□ 0.17
SCUBE2-201ENST00000309263 COL5A2P05997 1499 aaPredicted RBP16.09■□□□□ 0.17
SCUBE2-201ENST00000309263 TCRBV5S4A2TA0A5A2 114 aa16.09■□□□□ 0.17
SCUBE2-201ENST00000309263 MCM3P25205 808 aa16.09■□□□□ 0.17
SCUBE2-201ENST00000309263 HERVK_113P62684 666 aa16.09■□□□□ 0.17
SCUBE2-201ENST00000309263 TRAPPC11Q7Z392 1133 aa16.09■□□□□ 0.17
SCUBE2-201ENST00000309263 TADA2BQ86TJ2 420 aa16.09■□□□□ 0.17
SCUBE2-201ENST00000309263 SH2D3CQ8N5H7 860 aa16.09■□□□□ 0.17
SCUBE2-201ENST00000309263 MB21D1Q8N884 522 aa16.09■□□□□ 0.17
SCUBE2-201ENST00000309263 SPATA20Q8TB22 786 aa16.09■□□□□ 0.17
SCUBE2-201ENST00000309263 HPS3Q969F9 1004 aa16.09■□□□□ 0.17
SCUBE2-201ENST00000309263 CAPS2Q9BXY5 557 aa16.09■□□□□ 0.17
SCUBE2-201ENST00000309263 MLXIPQ9HAP2 919 aa16.09■□□□□ 0.17
SCUBE2-201ENST00000309263 NDUFAB1O14561 156 aa16.08■□□□□ 0.17
SCUBE2-201ENST00000309263 PSMA7O14818 248 aa16.08■□□□□ 0.17
SCUBE2-201ENST00000309263 AMPD2Q01433 879 aa16.08■□□□□ 0.17
SCUBE2-201ENST00000309263 EVX2Q03828 476 aa16.08■□□□□ 0.17
SCUBE2-201ENST00000309263 PDCLQ13371 301 aa16.08■□□□□ 0.17
SCUBE2-201ENST00000309263 RNF187Q5TA31 235 aaPredicted RBP16.08■□□□□ 0.17
SCUBE2-201ENST00000309263 MTRQ99707 1265 aa16.08■□□□□ 0.17
SCUBE2-201ENST00000309263 LRRC1Q9BTT6 524 aa16.08■□□□□ 0.17
SCUBE2-201ENST00000309263 RNF26Q9BY78 433 aaPredicted RBP16.08■□□□□ 0.17
SCUBE2-201ENST00000309263 NHEJ1Q9H9Q4 299 aaPredicted RBP16.08■□□□□ 0.17
SCUBE2-201ENST00000309263 MYO1AQ9UBC5 1043 aa16.08■□□□□ 0.17
SCUBE2-201ENST00000309263 LOC102724159A0A0B4J2E5 919 aa16.08■□□□□ 0.16
SCUBE2-201ENST00000309263 ESYT3A0FGR9 886 aa16.08■□□□□ 0.16
SCUBE2-201ENST00000309263 TUBB4BP68371 445 aa16.08■□□□□ 0.16
SCUBE2-201ENST00000309263 SF3A3Q12874 501 aaKnown RBP eCLIP16.08■□□□□ 0.16
SCUBE2-201ENST00000309263 PWP2Q15269 919 aaKnown RBP16.08■□□□□ 0.16
SCUBE2-201ENST00000309263 C2CD5Q86YS7 1000 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms