RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 BARHL2Q9NY43 387 aa13.63□□□□□ -0.23
TRIM40-205ENST00000307859 ZNF70Q9UC06 446 aaPredicted RBP13.63□□□□□ -0.23
TRIM40-205ENST00000307859 NOL7Q9UMY1 257 aaKnown RBP13.63□□□□□ -0.23
TRIM40-205ENST00000307859 HPSEQ9Y251 543 aa13.63□□□□□ -0.23
TRIM40-205ENST00000307859 ZBTB12Q9Y330 459 aaPredicted RBP13.63□□□□□ -0.23
TRIM40-205ENST00000307859 PCDHB6Q9Y5E3 794 aa13.63□□□□□ -0.23
TRIM40-205ENST00000307859 FAM196BA6NMK8 535 aa13.62□□□□□ -0.23
TRIM40-205ENST00000307859 M0R2N6 131 aa13.62□□□□□ -0.23
TRIM40-205ENST00000307859 STXBP3O00186 592 aa13.62□□□□□ -0.23
TRIM40-205ENST00000307859 PFKFB1P16118 471 aa13.62□□□□□ -0.23
TRIM40-205ENST00000307859 PTPREP23469 700 aa13.62□□□□□ -0.23
TRIM40-205ENST00000307859 TYRO3Q06418 890 aa13.62□□□□□ -0.23
TRIM40-205ENST00000307859 UVSSAQ2YD98 709 aa13.62□□□□□ -0.23
TRIM40-205ENST00000307859 CERKLQ49MI3 558 aaPredicted RBP13.62□□□□□ -0.23
TRIM40-205ENST00000307859 RESP18Q5W5W9 173 aa13.62□□□□□ -0.23
TRIM40-205ENST00000307859 TYW1BQ6NUM6 668 aa13.62□□□□□ -0.23
TRIM40-205ENST00000307859 SHC4Q6S5L8 630 aa13.62□□□□□ -0.23
TRIM40-205ENST00000307859 CKAP2LQ8IYA6 745 aa13.62□□□□□ -0.23
TRIM40-205ENST00000307859 KRI1Q8N9T8 703 aaKnown RBP13.62□□□□□ -0.23
TRIM40-205ENST00000307859 RNF214Q8ND24 703 aa13.62□□□□□ -0.23
TRIM40-205ENST00000307859 ZBED3Q96IU2 234 aaPredicted RBP13.62□□□□□ -0.23
TRIM40-205ENST00000307859 PPP1R9BQ96SB3 815 aa13.62□□□□□ -0.23
TRIM40-205ENST00000307859 CLIP2Q9UDT6 1046 aa13.62□□□□□ -0.23
TRIM40-205ENST00000307859 FBXO2Q9UK22 296 aaPredicted RBP13.62□□□□□ -0.23
TRIM40-205ENST00000307859 ABT1Q9ULW3 272 aaKnown RBP13.62□□□□□ -0.23
TRIM40-205ENST00000307859 PCDHA4Q9UN74 947 aa13.62□□□□□ -0.23
TRIM40-205ENST00000307859 TRIM75PA6NK02 468 aa13.61□□□□□ -0.23
TRIM40-205ENST00000307859 MPHOSPH10O00566 681 aaKnown RBP13.61□□□□□ -0.23
TRIM40-205ENST00000307859 BMP15O95972 392 aa13.61□□□□□ -0.23
TRIM40-205ENST00000307859 TRAPPC10P48553 1259 aa13.61□□□□□ -0.23
TRIM40-205ENST00000307859 MMP14P50281 582 aa13.61□□□□□ -0.23
TRIM40-205ENST00000307859 ZNF543Q08ER8 600 aa13.61□□□□□ -0.23
TRIM40-205ENST00000307859 CCDC173Q0VFZ6 552 aa13.61□□□□□ -0.23
TRIM40-205ENST00000307859 CIAPIN1Q6FI81 312 aa13.61□□□□□ -0.23
TRIM40-205ENST00000307859 TMEM179Q6ZVK1 233 aa13.61□□□□□ -0.23
TRIM40-205ENST00000307859 BLIDQ8IZY5 108 aa13.61□□□□□ -0.23
TRIM40-205ENST00000307859 FAM151AQ8WW52 585 aa13.61□□□□□ -0.23
TRIM40-205ENST00000307859 MKL1Q969V6 931 aa13.61□□□□□ -0.23
TRIM40-205ENST00000307859 RRP36Q96EU6 259 aaKnown RBP13.61□□□□□ -0.23
TRIM40-205ENST00000307859 CAPNS2Q96L46 248 aa13.61□□□□□ -0.23
TRIM40-205ENST00000307859 TRIM34Q9BYJ4 488 aa13.61□□□□□ -0.23
TRIM40-205ENST00000307859 NYAP2Q9P242 653 aa13.61□□□□□ -0.23
TRIM40-205ENST00000307859 HACL1Q9UJ83 578 aa13.61□□□□□ -0.23
TRIM40-205ENST00000307859 MRVI1Q9Y6F6 885 aa13.61□□□□□ -0.23
TRIM40-205ENST00000307859 hCG_1984214I3L0E3 225 aa13.61□□□□□ -0.23
TRIM40-205ENST00000307859 ADAMTS3O15072 1205 aa13.61□□□□□ -0.23
TRIM40-205ENST00000307859 MAP2K2P36507 400 aa13.61□□□□□ -0.23
TRIM40-205ENST00000307859 EIF6P56537 245 aaKnown RBP13.61□□□□□ -0.23
TRIM40-205ENST00000307859 EAPPQ56P03 285 aaPredicted RBP13.61□□□□□ -0.23
TRIM40-205ENST00000307859 NOM1Q5C9Z4 860 aaKnown RBP13.61□□□□□ -0.23
TRIM40-205ENST00000307859 ZNF713Q8N859 430 aaPredicted RBP13.61□□□□□ -0.23
TRIM40-205ENST00000307859 ZNF579Q8NAF0 562 aaKnown RBP13.61□□□□□ -0.23
TRIM40-205ENST00000307859 JDP2Q8WYK2 163 aa13.61□□□□□ -0.23
TRIM40-205ENST00000307859 ANP32BQ92688 251 aaKnown RBP13.61□□□□□ -0.23
TRIM40-205ENST00000307859 TIGD1Q96MW7 591 aa13.61□□□□□ -0.23
TRIM40-205ENST00000307859 CSRNP1Q96S65 589 aa13.61□□□□□ -0.23
TRIM40-205ENST00000307859 CPVLQ9H3G5 476 aa13.61□□□□□ -0.23
TRIM40-205ENST00000307859 KANSL2Q9H9L4 492 aa13.61□□□□□ -0.23
TRIM40-205ENST00000307859 HERC5Q9UII4 1024 aaKnown RBP13.61□□□□□ -0.23
TRIM40-205ENST00000307859 CLEC11AQ9Y240 323 aa13.61□□□□□ -0.23
TRIM40-205ENST00000307859 FRMPD2Q68DX3 1309 aaPredicted RBP13.6□□□□□ -0.23
TRIM40-205ENST00000307859 CLRN2A0PK11 232 aa13.6□□□□□ -0.23
TRIM40-205ENST00000307859 ZNF202O95125 648 aa13.6□□□□□ -0.23
TRIM40-205ENST00000307859 TTC38Q5R3I4 469 aa13.6□□□□□ -0.23
TRIM40-205ENST00000307859 GPATCH4Q5T3I0 446 aaKnown RBP13.6□□□□□ -0.23
TRIM40-205ENST00000307859 HEATR3Q7Z4Q2 680 aa13.6□□□□□ -0.23
TRIM40-205ENST00000307859 CCDC12Q8WUD4 166 aaPredicted RBP13.6□□□□□ -0.23
TRIM40-205ENST00000307859 CLIC6Q96NY7 704 aa13.6□□□□□ -0.23
TRIM40-205ENST00000307859 ZMYND12Q9H0C1 365 aa13.6□□□□□ -0.23
TRIM40-205ENST00000307859 SEC63Q9UGP8 760 aaKnown RBP13.6□□□□□ -0.23
TRIM40-205ENST00000307859 SRPRBQ9Y5M8 271 aaKnown RBP13.6□□□□□ -0.23
TRIM40-205ENST00000307859 MYH7BA7E2Y1 1941 aa13.59□□□□□ -0.23
TRIM40-205ENST00000307859 ESYT2A0FGR8 921 aa13.59□□□□□ -0.23
TRIM40-205ENST00000307859 TCP10L2B9ZVM9 353 aa13.59□□□□□ -0.23
TRIM40-205ENST00000307859 WNT7AO00755 349 aa13.59□□□□□ -0.23
TRIM40-205ENST00000307859 EEF2P13639 858 aaKnown RBP13.59□□□□□ -0.23
TRIM40-205ENST00000307859 EPHX2P34913 555 aa13.59□□□□□ -0.23
TRIM40-205ENST00000307859 SYKP43405 635 aa13.59□□□□□ -0.23
TRIM40-205ENST00000307859 TNIP1Q15025 636 aa13.59□□□□□ -0.23
TRIM40-205ENST00000307859 ABCB5Q2M3G0 1257 aa13.59□□□□□ -0.23
TRIM40-205ENST00000307859 SHROOM1Q2M3G4 852 aaPredicted RBP13.59□□□□□ -0.23
TRIM40-205ENST00000307859 SASS6Q6UVJ0 657 aa13.59□□□□□ -0.23
TRIM40-205ENST00000307859 PIK3AP1Q6ZUJ8 805 aa13.59□□□□□ -0.23
TRIM40-205ENST00000307859 FAM83AQ86UY5 434 aa13.59□□□□□ -0.23
TRIM40-205ENST00000307859 PDLIM2Q96JY6 352 aa13.59□□□□□ -0.23
TRIM40-205ENST00000307859 PIGSQ96S52 555 aa13.59□□□□□ -0.23
TRIM40-205ENST00000307859 RPS12P25398 132 aaKnown RBP13.58□□□□□ -0.24
TRIM40-205ENST00000307859 ZNF280AP59817 542 aaPredicted RBP13.58□□□□□ -0.24
TRIM40-205ENST00000307859 SEPT2Q15019 361 aa13.58□□□□□ -0.24
TRIM40-205ENST00000307859 SIAH1Q8IUQ4 282 aa13.58□□□□□ -0.24
TRIM40-205ENST00000307859 FAM200AQ8TCP9 573 aa13.58□□□□□ -0.24
TRIM40-205ENST00000307859 DCAF4Q8WV16 495 aa13.58□□□□□ -0.24
TRIM40-205ENST00000307859 UBA5Q9GZZ9 404 aa13.58□□□□□ -0.24
TRIM40-205ENST00000307859 SYNPO2Q9UMS6 1093 aa13.58□□□□□ -0.24
TRIM40-205ENST00000307859 PCDHA6Q9UN73 950 aa13.58□□□□□ -0.24
TRIM40-205ENST00000307859 PCDHA8Q9Y5H6 950 aa13.58□□□□□ -0.24
TRIM40-205ENST00000307859 CAVIN2O95810 425 aa13.57□□□□□ -0.24
TRIM40-205ENST00000307859 ATP2B1P20020 1258 aa13.57□□□□□ -0.24
TRIM40-205ENST00000307859 NAPAP54920 295 aa13.57□□□□□ -0.24
TRIM40-205ENST00000307859 ATP2C1P98194 919 aaPredicted RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms