RNA–Protein interactions for RNA: ENST00000307297.8

PATJ-201, Transcript of PATJ, crumbs cell polarity complex component, humanhuman

TSL 2 BASIC

Gene PATJ, Length 1,585 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATJ-201ENST00000307297 KLRF2D3W0D1 207 aa12.9□□□□□ -0.34
PATJ-201ENST00000307297 CPLX1O14810 134 aa12.9□□□□□ -0.34
PATJ-201ENST00000307297 PDIA3P30101 505 aaKnown RBP12.9□□□□□ -0.34
PATJ-201ENST00000307297 COG2Q14746 738 aa12.9□□□□□ -0.34
PATJ-201ENST00000307297 TAF1CQ15572 869 aaPredicted RBP12.9□□□□□ -0.34
PATJ-201ENST00000307297 GPAT2Q6NUI2 795 aa12.9□□□□□ -0.34
PATJ-201ENST00000307297 FAM43AQ8N2R8 423 aa12.9□□□□□ -0.34
PATJ-201ENST00000307297 PRPF38AQ8NAV1 312 aaKnown RBP12.9□□□□□ -0.34
PATJ-201ENST00000307297 KIFC2Q96AC6 838 aa12.9□□□□□ -0.34
PATJ-201ENST00000307297 SH2B1Q9NRF2 756 aaPredicted RBP12.9□□□□□ -0.34
PATJ-201ENST00000307297 HOXC10Q9NYD6 342 aa12.9□□□□□ -0.34
PATJ-201ENST00000307297 MAD2L2Q9UI95 211 aa12.9□□□□□ -0.34
PATJ-201ENST00000307297 TPCN1Q9ULQ1 816 aa12.9□□□□□ -0.34
PATJ-201ENST00000307297 NID2Q14112 1375 aa12.9□□□□□ -0.34
PATJ-201ENST00000307297 RLFQ13129 1914 aa12.9□□□□□ -0.34
PATJ-201ENST00000307297 MYPNQ86TC9 1320 aa12.9□□□□□ -0.34
PATJ-201ENST00000307297 IGF2BP3O00425 579 aaKnown RBP eCLIP12.9□□□□□ -0.35
PATJ-201ENST00000307297 PLA2G6O60733 806 aa12.9□□□□□ -0.35
PATJ-201ENST00000307297 HSCBQ8IWL3 235 aa12.9□□□□□ -0.35
PATJ-201ENST00000307297 ZIC5Q96T25 663 aa12.9□□□□□ -0.35
PATJ-201ENST00000307297 PTPN18Q99952 460 aa12.9□□□□□ -0.35
PATJ-201ENST00000307297 BEGAINQ9BUH8 593 aa12.9□□□□□ -0.35
PATJ-201ENST00000307297 ASCC2Q9H1I8 757 aaPredicted RBP12.9□□□□□ -0.35
PATJ-201ENST00000307297 PPP1R9AQ9ULJ8 1098 aa12.9□□□□□ -0.35
PATJ-201ENST00000307297 A0A0G2JMZ2 1700 aa12.89□□□□□ -0.35
PATJ-201ENST00000307297 PALM3A6NDB9 673 aaPredicted RBP12.89□□□□□ -0.35
PATJ-201ENST00000307297 CDKL5O76039 1030 aa12.89□□□□□ -0.35
PATJ-201ENST00000307297 FDX1P10109 184 aa12.89□□□□□ -0.35
PATJ-201ENST00000307297 HERVK_113P62684 666 aa12.89□□□□□ -0.35
PATJ-201ENST00000307297 CCT2P78371 535 aaKnown RBP12.89□□□□□ -0.35
PATJ-201ENST00000307297 MAP2K1Q02750 393 aaPredicted RBP12.89□□□□□ -0.35
PATJ-201ENST00000307297 SYDE2Q5VT97 1194 aa12.89□□□□□ -0.35
PATJ-201ENST00000307297 STAG2Q8N3U4 1231 aa12.89□□□□□ -0.35
PATJ-201ENST00000307297 ZFYVE28Q9HCC9 887 aa12.89□□□□□ -0.35
PATJ-201ENST00000307297 BAZ2BQ9UIF8 2168 aaKnown RBP12.88□□□□□ -0.35
PATJ-201ENST00000307297 PFKFB2O60825 505 aa12.88□□□□□ -0.35
PATJ-201ENST00000307297 ZBED4O75132 1171 aa12.88□□□□□ -0.35
PATJ-201ENST00000307297 DSG3P32926 999 aa12.88□□□□□ -0.35
PATJ-201ENST00000307297 SLC16A2P36021 539 aa12.88□□□□□ -0.35
PATJ-201ENST00000307297 TTBK2Q6IQ55 1244 aa12.88□□□□□ -0.35
PATJ-201ENST00000307297 BTNL9Q6UXG8 535 aa12.88□□□□□ -0.35
PATJ-201ENST00000307297 TMTC3Q6ZXV5 915 aa12.88□□□□□ -0.35
PATJ-201ENST00000307297 MB21D1Q8N884 522 aa12.88□□□□□ -0.35
PATJ-201ENST00000307297 UBA5Q9GZZ9 404 aa12.88□□□□□ -0.35
PATJ-201ENST00000307297 FBXO28Q9NVF7 368 aa12.88□□□□□ -0.35
PATJ-201ENST00000307297 SEC63Q9UGP8 760 aaKnown RBP12.88□□□□□ -0.35
PATJ-201ENST00000307297 HPS5Q9UPZ3 1129 aa12.88□□□□□ -0.35
PATJ-201ENST00000307297 SPDYE16A6NNV3 312 aaPredicted RBP12.87□□□□□ -0.35
PATJ-201ENST00000307297 CYP2C8P10632 490 aa12.87□□□□□ -0.35
PATJ-201ENST00000307297 SMARCA1P28370 1054 aa12.87□□□□□ -0.35
PATJ-201ENST00000307297 GCLCP48506 637 aaPredicted RBP12.87□□□□□ -0.35
PATJ-201ENST00000307297 AKAP17AQ02040 695 aaKnown RBP12.87□□□□□ -0.35
PATJ-201ENST00000307297 ME3Q16798 604 aa12.87□□□□□ -0.35
PATJ-201ENST00000307297 TRIM22Q8IYM9 498 aa12.87□□□□□ -0.35
PATJ-201ENST00000307297 GTF3C6Q969F1 213 aa12.87□□□□□ -0.35
PATJ-201ENST00000307297 ATG4CQ96DT6 458 aa12.87□□□□□ -0.35
PATJ-201ENST00000307297 SPZ1Q9BXG8 430 aa12.87□□□□□ -0.35
PATJ-201ENST00000307297 NCOA5Q9HCD5 579 aaKnown RBP12.87□□□□□ -0.35
PATJ-201ENST00000307297 PRR12Q9ULL5 1215 aa12.87□□□□□ -0.35
PATJ-201ENST00000307297 CA12O43570 354 aa12.86□□□□□ -0.35
PATJ-201ENST00000307297 PLEKHA8P1O95397 391 aa12.86□□□□□ -0.35
PATJ-201ENST00000307297 LARGE1O95461 756 aa12.86□□□□□ -0.35
PATJ-201ENST00000307297 CDC27P30260 824 aa12.86□□□□□ -0.35
PATJ-201ENST00000307297 SCRN1Q12765 414 aa12.86□□□□□ -0.35
PATJ-201ENST00000307297 LBX2Q6XYB7 198 aa12.86□□□□□ -0.35
PATJ-201ENST00000307297 HOMER1Q86YM7 354 aa12.86□□□□□ -0.35
PATJ-201ENST00000307297 ADGRF4Q8IZF3 695 aa12.86□□□□□ -0.35
PATJ-201ENST00000307297 CCDC82Q8N4S0 544 aa12.86□□□□□ -0.35
PATJ-201ENST00000307297 SNX21Q969T3 373 aa12.86□□□□□ -0.35
PATJ-201ENST00000307297 RRP36Q96EU6 259 aaKnown RBP12.86□□□□□ -0.35
PATJ-201ENST00000307297 P2RX7Q99572 595 aaKnown RBP12.86□□□□□ -0.35
PATJ-201ENST00000307297 PAGR1Q9BTK6 254 aa12.86□□□□□ -0.35
PATJ-201ENST00000307297 VAT1LQ9HCJ6 419 aa12.86□□□□□ -0.35
PATJ-201ENST00000307297 RBM27Q9P2N5 1060 aaKnown RBP12.86□□□□□ -0.35
PATJ-201ENST00000307297 PNMA2Q9UL42 364 aa12.86□□□□□ -0.35
PATJ-201ENST00000307297 K7ELQ4 463 aaPredicted RBP12.86□□□□□ -0.35
PATJ-201ENST00000307297 VWA5AO00534 786 aa12.86□□□□□ -0.35
PATJ-201ENST00000307297 CD2BP2O95400 341 aaKnown RBP12.86□□□□□ -0.35
PATJ-201ENST00000307297 ADD1P35611 737 aaKnown RBP12.86□□□□□ -0.35
PATJ-201ENST00000307297 TRAF1Q13077 416 aa12.86□□□□□ -0.35
PATJ-201ENST00000307297 BECN1Q14457 450 aa12.86□□□□□ -0.35
PATJ-201ENST00000307297 PLS1Q14651 629 aa12.86□□□□□ -0.35
PATJ-201ENST00000307297 CDC37Q16543 378 aaPredicted RBP12.86□□□□□ -0.35
PATJ-201ENST00000307297 CCDC83Q8IWF9 413 aa12.86□□□□□ -0.35
PATJ-201ENST00000307297 CMTR1Q8N1G2 835 aaKnown RBP12.86□□□□□ -0.35
PATJ-201ENST00000307297 TMX3Q96JJ7 454 aa12.86□□□□□ -0.35
PATJ-201ENST00000307297 CPVLQ9H3G5 476 aa12.86□□□□□ -0.35
PATJ-201ENST00000307297 SAGE1Q9NXZ1 904 aa12.86□□□□□ -0.35
PATJ-201ENST00000307297 RABGAP1Q9Y3P9 1069 aa12.86□□□□□ -0.35
PATJ-201ENST00000307297 CNTNAP5Q8WYK1 1306 aa12.85□□□□□ -0.35
PATJ-201ENST00000307297 CEP350Q5VT06 3117 aa12.85□□□□□ -0.35
PATJ-201ENST00000307297 RBBP6Q7Z6E9 1792 aaKnown RBP12.85□□□□□ -0.35
PATJ-201ENST00000307297 PCNTO95613 3336 aa12.85□□□□□ -0.35
PATJ-201ENST00000307297 TLR2O60603 784 aa12.85□□□□□ -0.35
PATJ-201ENST00000307297 TRPA1O75762 1119 aa12.85□□□□□ -0.35
PATJ-201ENST00000307297 IFNAR1P17181 557 aa12.85□□□□□ -0.35
PATJ-201ENST00000307297 ANP32AP39687 249 aaKnown RBP12.85□□□□□ -0.35
PATJ-201ENST00000307297 CCNA1P78396 465 aa12.85□□□□□ -0.35
PATJ-201ENST00000307297 SSRP1Q08945 709 aaKnown RBP12.85□□□□□ -0.35
PATJ-201ENST00000307297 CRHR2Q13324 411 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms