RNA–Protein interactions for RNA: ENST00000305699.15

FANCA-201, Transcript of FA complementation group A, humanhuman

TSL 2

Gene FANCA, Length 1,430 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-201ENST00000305699 ALX1Q15699 326 aa18.5■□□□□ 0.55
FANCA-201ENST00000305699 PPP4R3BQ5MIZ7 849 aa18.5■□□□□ 0.55
FANCA-201ENST00000305699 TICAM2Q86XR7 235 aa18.5■□□□□ 0.55
FANCA-201ENST00000305699 PLEKHM2Q8IWE5 1019 aa18.5■□□□□ 0.55
FANCA-201ENST00000305699 CPXCR1Q8N123 301 aa18.5■□□□□ 0.55
FANCA-201ENST00000305699 CHMP4CQ96CF2 233 aa18.5■□□□□ 0.55
FANCA-201ENST00000305699 MAML3Q96JK9 1138 aa18.5■□□□□ 0.55
FANCA-201ENST00000305699 BMP3P12645 472 aa18.49■□□□□ 0.55
FANCA-201ENST00000305699 IKQ13123 557 aaPredicted RBP18.49■□□□□ 0.55
FANCA-201ENST00000305699 ANAPC4Q9UJX5 808 aa18.49■□□□□ 0.55
FANCA-201ENST00000305699 PFASO15067 1338 aa18.49■□□□□ 0.55
FANCA-201ENST00000305699 TMEM232C9JQI7 657 aa18.49■□□□□ 0.55
FANCA-201ENST00000305699 IGHA2P01877 340 aa18.49■□□□□ 0.55
FANCA-201ENST00000305699 FGAP02671 866 aa18.49■□□□□ 0.55
FANCA-201ENST00000305699 RRP12Q5JTH9 1297 aaKnown RBP18.49■□□□□ 0.55
FANCA-201ENST00000305699 PRAMEF19Q5SWL8 479 aa18.49■□□□□ 0.55
FANCA-201ENST00000305699 ANO1Q5XXA6 986 aa18.49■□□□□ 0.55
FANCA-201ENST00000305699 ZNF589Q86UQ0 364 aaPredicted RBP18.49■□□□□ 0.55
FANCA-201ENST00000305699 RBM27Q9P2N5 1060 aaKnown RBP18.49■□□□□ 0.55
FANCA-201ENST00000305699 ZMYND8Q9ULU4 1186 aaPredicted RBP18.49■□□□□ 0.55
FANCA-201ENST00000305699 CCDC171Q6TFL3 1326 aa18.49■□□□□ 0.55
FANCA-201ENST00000305699 RANBP2P49792 3224 aaKnown RBP18.48■□□□□ 0.55
FANCA-201ENST00000305699 PLXNA1Q9UIW2 1896 aa18.48■□□□□ 0.55
FANCA-201ENST00000305699 NMT2O60551 498 aa18.48■□□□□ 0.55
FANCA-201ENST00000305699 HSPD1P10809 573 aaKnown RBP18.48■□□□□ 0.55
FANCA-201ENST00000305699 COL6A1P12109 1028 aa18.48■□□□□ 0.55
FANCA-201ENST00000305699 SDSP20132 328 aa18.48■□□□□ 0.55
FANCA-201ENST00000305699 SLC1A4P43007 532 aa18.48■□□□□ 0.55
FANCA-201ENST00000305699 MFAP1P55081 439 aaKnown RBP18.48■□□□□ 0.55
FANCA-201ENST00000305699 OSBPL3Q9H4L5 887 aa18.48■□□□□ 0.55
FANCA-201ENST00000305699 RAVER2Q9HCJ3 691 aaKnown RBP18.48■□□□□ 0.55
FANCA-201ENST00000305699 MTMR7Q9Y216 660 aa18.48■□□□□ 0.55
FANCA-201ENST00000305699 RIPK3Q9Y572 518 aa18.48■□□□□ 0.55
FANCA-201ENST00000305699 SEPT4O43236 478 aa18.47■□□□□ 0.55
FANCA-201ENST00000305699 ORC4O43929 436 aa18.47■□□□□ 0.55
FANCA-201ENST00000305699 MYCNP04198 464 aaPredicted RBP18.47■□□□□ 0.55
FANCA-201ENST00000305699 MCCP23508 829 aa18.47■□□□□ 0.55
FANCA-201ENST00000305699 FXR1P51114 621 aaKnown RBP eCLIP18.47■□□□□ 0.55
FANCA-201ENST00000305699 STAT2P52630 851 aa18.47■□□□□ 0.55
FANCA-201ENST00000305699 HAND2P61296 217 aa18.47■□□□□ 0.55
FANCA-201ENST00000305699 DDX11Q96FC9 970 aa18.47■□□□□ 0.55
FANCA-201ENST00000305699 SLC38A10Q9HBR0 1119 aa18.47■□□□□ 0.55
FANCA-201ENST00000305699 IL17RBQ9NRM6 502 aa18.47■□□□□ 0.55
FANCA-201ENST00000305699 DIAPH3Q9NSV4 1193 aa18.47■□□□□ 0.55
FANCA-201ENST00000305699 TACC3Q9Y6A5 838 aa18.47■□□□□ 0.55
FANCA-201ENST00000305699 ATP2A1O14983 1001 aa18.46■□□□□ 0.55
FANCA-201ENST00000305699 IRX6P78412 446 aaPredicted RBP18.46■□□□□ 0.55
FANCA-201ENST00000305699 ZNF792Q3KQV3 632 aa18.46■□□□□ 0.55
FANCA-201ENST00000305699 CHURC1Q8WUH1 139 aa18.46■□□□□ 0.55
FANCA-201ENST00000305699 GMCL1Q96IK5 515 aa18.46■□□□□ 0.55
FANCA-201ENST00000305699 TINF2Q9BSI4 451 aa18.46■□□□□ 0.55
FANCA-201ENST00000305699 SENP6Q9GZR1 1112 aaPredicted RBP18.46■□□□□ 0.55
FANCA-201ENST00000305699 DIS3Q9Y2L1 958 aaKnown RBP18.46■□□□□ 0.55
FANCA-201ENST00000305699 DNAH12Q6ZR08 3092 aa18.46■□□□□ 0.55
FANCA-201ENST00000305699 ZMYM6O95789 1325 aa18.45■□□□□ 0.54
FANCA-201ENST00000305699 DNM1LO00429 736 aa18.45■□□□□ 0.54
FANCA-201ENST00000305699 SYN1P17600 705 aa18.45■□□□□ 0.54
FANCA-201ENST00000305699 LRRC26Q2I0M4 334 aa18.45■□□□□ 0.54
FANCA-201ENST00000305699 GJC2Q5T442 439 aaPredicted RBP18.45■□□□□ 0.54
FANCA-201ENST00000305699 KCTD1Q719H9 257 aa18.45■□□□□ 0.54
FANCA-201ENST00000305699 FAM160B2Q86V87 743 aa18.45■□□□□ 0.54
FANCA-201ENST00000305699 ARRDC4Q8NCT1 418 aa18.45■□□□□ 0.54
FANCA-201ENST00000305699 FGRP09769 529 aa18.44■□□□□ 0.54
FANCA-201ENST00000305699 FDX1P10109 184 aa18.44■□□□□ 0.54
FANCA-201ENST00000305699 OAZ1P54368 228 aa18.44■□□□□ 0.54
FANCA-201ENST00000305699 CWC27Q6UX04 472 aaKnown RBP18.44■□□□□ 0.54
FANCA-201ENST00000305699 ANKRD35Q8N283 1001 aa18.44■□□□□ 0.54
FANCA-201ENST00000305699 STAG1Q8WVM7 1258 aa18.44■□□□□ 0.54
FANCA-201ENST00000305699 HOMER2Q9NSB8 354 aa18.44■□□□□ 0.54
FANCA-201ENST00000305699 FBXO40Q9UH90 709 aa18.44■□□□□ 0.54
FANCA-201ENST00000305699 CNPY2Q9Y2B0 182 aa18.44■□□□□ 0.54
FANCA-201ENST00000305699 KBTBD13C9JR72 458 aa18.43■□□□□ 0.54
FANCA-201ENST00000305699 HIP1O00291 1037 aa18.43■□□□□ 0.54
FANCA-201ENST00000305699 CCDC96Q2M329 555 aa18.43■□□□□ 0.54
FANCA-201ENST00000305699 RCSD1Q6JBY9 416 aa18.43■□□□□ 0.54
FANCA-201ENST00000305699 MFSD6Q6ZSS7 791 aa18.43■□□□□ 0.54
FANCA-201ENST00000305699 NRBP1Q9UHY1 535 aa18.43■□□□□ 0.54
FANCA-201ENST00000305699 ATN1P54259 1190 aaPredicted RBP18.42■□□□□ 0.54
FANCA-201ENST00000305699 RASGRP2Q7LDG7 609 aa18.42■□□□□ 0.54
FANCA-201ENST00000305699 CHST13Q8NET6 341 aa18.42■□□□□ 0.54
FANCA-201ENST00000305699 PRO3102Q9H379 93 aa18.42■□□□□ 0.54
FANCA-201ENST00000305699 RARBP10826 455 aa18.41■□□□□ 0.54
FANCA-201ENST00000305699 TAL1P17542 331 aaPredicted RBP18.41■□□□□ 0.54
FANCA-201ENST00000305699 AKNAD1Q5T1N1 836 aa18.41■□□□□ 0.54
FANCA-201ENST00000305699 CCDC174Q6PII3 467 aa18.41■□□□□ 0.54
FANCA-201ENST00000305699 TBC1D10CQ8IV04 446 aa18.41■□□□□ 0.54
FANCA-201ENST00000305699 DCAF4Q8WV16 495 aa18.41■□□□□ 0.54
FANCA-201ENST00000305699 RNF41Q9H4P4 317 aaPredicted RBP18.41■□□□□ 0.54
FANCA-201ENST00000305699 SMCHD1A6NHR9 2005 aa18.41■□□□□ 0.54
FANCA-201ENST00000305699 DNAJC25-GNG10A0A024R161 153 aa18.4■□□□□ 0.54
FANCA-201ENST00000305699 ZNF213O14771 459 aa18.4■□□□□ 0.54
FANCA-201ENST00000305699 PLA2G6O60733 806 aa18.4■□□□□ 0.54
FANCA-201ENST00000305699 TOP1P11387 765 aaKnown RBP18.4■□□□□ 0.54
FANCA-201ENST00000305699 PCP11498 1178 aaKnown RBP18.4■□□□□ 0.54
FANCA-201ENST00000305699 SNAP25P60880 206 aa18.4■□□□□ 0.54
FANCA-201ENST00000305699 AGBL1Q96MI9 1066 aa18.4■□□□□ 0.54
FANCA-201ENST00000305699 ACAD9Q9H845 621 aa18.4■□□□□ 0.54
FANCA-201ENST00000305699 XPNPEP3Q9NQH7 507 aa18.4■□□□□ 0.54
FANCA-201ENST00000305699 RNF146Q9NTX7 359 aa18.4■□□□□ 0.54
FANCA-201ENST00000305699 PRR12Q9ULL5 1215 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms