RNA–Protein interactions for RNA: ENST00000303296.8

HIPK3-201, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 5 BASIC

Gene HIPK3, Length 7,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-201ENST00000303296 B4E1Z4 1266 aa15.57■□□□□ 0.08
HIPK3-201ENST00000303296 INHBAP08476 426 aa15.57■□□□□ 0.08
HIPK3-201ENST00000303296 MAGEA1P43355 309 aa15.57■□□□□ 0.08
HIPK3-201ENST00000303296 YWHAGP61981 247 aaKnown RBP eCLIP15.57■□□□□ 0.08
HIPK3-201ENST00000303296 KIAA1841Q6NSI8 718 aa15.57■□□□□ 0.08
HIPK3-201ENST00000303296 PAWRQ96IZ0 340 aaKnown RBP15.57■□□□□ 0.08
HIPK3-201ENST00000303296 SUGCTQ9HAC7 445 aa15.57■□□□□ 0.08
HIPK3-201ENST00000303296 FAM207AQ9NSI2 230 aaPredicted RBP15.57■□□□□ 0.08
HIPK3-201ENST00000303296 TRIM60Q495X7 471 aa15.57■□□□□ 0.08
HIPK3-201ENST00000303296 CC2D2BQ6DHV5 1058 aa15.57■□□□□ 0.08
HIPK3-201ENST00000303296 GOLGA5Q8TBA6 731 aa15.57■□□□□ 0.08
HIPK3-201ENST00000303296 TTC1Q99614 292 aa15.57■□□□□ 0.08
HIPK3-201ENST00000303296 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.57■□□□□ 0.08
HIPK3-201ENST00000303296 KRIT1O00522 736 aa15.57■□□□□ 0.08
HIPK3-201ENST00000303296 BRD2P25440 801 aaKnown RBP15.57■□□□□ 0.08
HIPK3-201ENST00000303296 OAS2P29728 719 aaKnown RBP15.57■□□□□ 0.08
HIPK3-201ENST00000303296 BUB1O43683 1085 aa15.57■□□□□ 0.08
HIPK3-201ENST00000303296 TMTC3Q6ZXV5 915 aa15.57■□□□□ 0.08
HIPK3-201ENST00000303296 TTC6Q86TZ1 520 aa15.57■□□□□ 0.08
HIPK3-201ENST00000303296 PLEKHG3A1L390 1219 aa15.57■□□□□ 0.08
HIPK3-201ENST00000303296 TRIM14Q14142 442 aa15.57■□□□□ 0.08
HIPK3-201ENST00000303296 SLF1Q9BQI6 1058 aa15.57■□□□□ 0.08
HIPK3-201ENST00000303296 EMILIN1Q9Y6C2 1016 aa15.57■□□□□ 0.08
HIPK3-201ENST00000303296 SYCE1LA8MT33 242 aa15.56■□□□□ 0.08
HIPK3-201ENST00000303296 CDKL2Q92772 493 aa15.56■□□□□ 0.08
HIPK3-201ENST00000303296 LRFN2Q9ULH4 789 aa15.56■□□□□ 0.08
HIPK3-201ENST00000303296 MAN1A2O60476 641 aa15.56■□□□□ 0.08
HIPK3-201ENST00000303296 TRIM27P14373 513 aa15.56■□□□□ 0.08
HIPK3-201ENST00000303296 PTK2BQ14289 1009 aa15.56■□□□□ 0.08
HIPK3-201ENST00000303296 NLRX1Q86UT6 975 aa15.56■□□□□ 0.08
HIPK3-201ENST00000303296 GSDMAQ96QA5 445 aa15.56■□□□□ 0.08
HIPK3-201ENST00000303296 FBXO2Q9UK22 296 aaPredicted RBP15.56■□□□□ 0.08
HIPK3-201ENST00000303296 ZBTB12Q9Y330 459 aaPredicted RBP15.56■□□□□ 0.08
HIPK3-201ENST00000303296 ATAD2Q6PL18 1390 aa15.56■□□□□ 0.08
HIPK3-201ENST00000303296 CFLARO15519 480 aa15.56■□□□□ 0.08
HIPK3-201ENST00000303296 NCF2P19878 526 aaPredicted RBP15.56■□□□□ 0.08
HIPK3-201ENST00000303296 TMOD1P28289 359 aa15.56■□□□□ 0.08
HIPK3-201ENST00000303296 PIK3CAP42336 1068 aa15.56■□□□□ 0.08
HIPK3-201ENST00000303296 TMEM247A6NEH6 219 aa15.56■□□□□ 0.08
HIPK3-201ENST00000303296 DDAH1O94760 285 aa15.56■□□□□ 0.08
HIPK3-201ENST00000303296 POLR2BP30876 1174 aaKnown RBP15.56■□□□□ 0.08
HIPK3-201ENST00000303296 RPAINQ86UA6 219 aa15.56■□□□□ 0.08
HIPK3-201ENST00000303296 DNAAF3Q8N9W5 541 aa15.56■□□□□ 0.08
HIPK3-201ENST00000303296 MRFAP1L1Q96HT8 127 aa15.56■□□□□ 0.08
HIPK3-201ENST00000303296 ADPGKQ9BRR6 497 aa15.56■□□□□ 0.08
HIPK3-201ENST00000303296 AATFQ9NY61 560 aaKnown RBP eCLIP15.56■□□□□ 0.08
HIPK3-201ENST00000303296 KIF19Q2TAC6 998 aa15.56■□□□□ 0.08
HIPK3-201ENST00000303296 CCNYQ8ND76 341 aa15.56■□□□□ 0.08
HIPK3-201ENST00000303296 TSR3Q9UJK0 312 aaKnown RBP15.56■□□□□ 0.08
HIPK3-201ENST00000303296 ARHGEF9O43307 516 aa15.56■□□□□ 0.08
HIPK3-201ENST00000303296 RPGRIP1Q96KN7 1286 aa15.56■□□□□ 0.08
HIPK3-201ENST00000303296 NUP58Q9BVL2 599 aa15.56■□□□□ 0.08
HIPK3-201ENST00000303296 TTF2Q9UNY4 1162 aaKnown RBP15.56■□□□□ 0.08
HIPK3-201ENST00000303296 C2CD5Q86YS7 1000 aa15.55■□□□□ 0.08
HIPK3-201ENST00000303296 B4GALNT2Q8NHY0 566 aa15.55■□□□□ 0.08
HIPK3-201ENST00000303296 TEKT4Q8WW24 435 aa15.55■□□□□ 0.08
HIPK3-201ENST00000303296 CSRNP1Q96S65 589 aa15.55■□□□□ 0.08
HIPK3-201ENST00000303296 HESX1Q9UBX0 185 aa15.55■□□□□ 0.08
HIPK3-201ENST00000303296 TJAP1Q5JTD0 557 aa15.55■□□□□ 0.08
HIPK3-201ENST00000303296 RFX6Q8HWS3 928 aa15.55■□□□□ 0.08
HIPK3-201ENST00000303296 NELFBQ8WX92 580 aa15.55■□□□□ 0.08
HIPK3-201ENST00000303296 STAMQ92783 540 aa15.55■□□□□ 0.08
HIPK3-201ENST00000303296 NCLNQ969V3 563 aa15.55■□□□□ 0.08
HIPK3-201ENST00000303296 BLZF1Q9H2G9 400 aa15.55■□□□□ 0.08
HIPK3-201ENST00000303296 ZNF148Q9UQR1 794 aa15.55■□□□□ 0.08
HIPK3-201ENST00000303296 GRM8O00222 908 aa15.55■□□□□ 0.08
HIPK3-201ENST00000303296 MBD4O95243 580 aa15.55■□□□□ 0.08
HIPK3-201ENST00000303296 EPHB1P54762 984 aa15.55■□□□□ 0.08
HIPK3-201ENST00000303296 GPR162Q16538 588 aa15.55■□□□□ 0.08
HIPK3-201ENST00000303296 UBAP1LF5GYI3 381 aa15.55■□□□□ 0.08
HIPK3-201ENST00000303296 ARHGAP6O43182 974 aa15.55■□□□□ 0.08
HIPK3-201ENST00000303296 TUBB4AP04350 444 aa15.55■□□□□ 0.08
HIPK3-201ENST00000303296 NSUN2Q08J23 767 aaKnown RBP eCLIP15.55■□□□□ 0.08
HIPK3-201ENST00000303296 NAA35Q5VZE5 725 aa15.55■□□□□ 0.08
HIPK3-201ENST00000303296 KDRP35968 1356 aa15.55■□□□□ 0.08
HIPK3-201ENST00000303296 IRS4O14654 1257 aaPredicted RBP15.55■□□□□ 0.08
HIPK3-201ENST00000303296 SLC1A4P43007 532 aa15.55■□□□□ 0.08
HIPK3-201ENST00000303296 TBC1D10BQ4KMP7 808 aaPredicted RBP15.55■□□□□ 0.08
HIPK3-201ENST00000303296 SLITRK6Q9H5Y7 841 aa15.55■□□□□ 0.08
HIPK3-201ENST00000303296 GEMIN8Q9NWZ8 242 aaKnown RBP15.55■□□□□ 0.08
HIPK3-201ENST00000303296 ZNF263O14978 683 aa15.55■□□□□ 0.08
HIPK3-201ENST00000303296 ATF2P15336 505 aa15.55■□□□□ 0.08
HIPK3-201ENST00000303296 YIPF2Q9BWQ6 316 aa15.55■□□□□ 0.08
HIPK3-201ENST00000303296 NKTRP30414 1462 aaKnown RBP15.55■□□□□ 0.08
HIPK3-201ENST00000303296 CCDC159P0C7I6 412 aa15.54■□□□□ 0.08
HIPK3-201ENST00000303296 LIG3P49916 1009 aa15.54■□□□□ 0.08
HIPK3-201ENST00000303296 GNGT1P63211 74 aa15.54■□□□□ 0.08
HIPK3-201ENST00000303296 BFSP1Q12934 665 aa15.54■□□□□ 0.08
HIPK3-201ENST00000303296 KCTD17Q8N5Z5 321 aa15.54■□□□□ 0.08
HIPK3-201ENST00000303296 SLC5A4Q9NY91 659 aa15.54■□□□□ 0.08
HIPK3-201ENST00000303296 LMNAP02545 664 aaKnown RBP15.54■□□□□ 0.08
HIPK3-201ENST00000303296 GRK7Q8WTQ7 553 aa15.54■□□□□ 0.08
HIPK3-201ENST00000303296 EFCAB14O75071 495 aa15.54■□□□□ 0.08
HIPK3-201ENST00000303296 POLE2P56282 527 aa15.54■□□□□ 0.08
HIPK3-201ENST00000303296 GOLGA8QA0A0J9YX86 632 aa15.54■□□□□ 0.08
HIPK3-201ENST00000303296 hCG_1642624A0A1W2PR95 340 aa15.54■□□□□ 0.08
HIPK3-201ENST00000303296 GOLGA8OA6NCC3 632 aa15.54■□□□□ 0.08
HIPK3-201ENST00000303296 GOLGA8NF8WBI6 632 aa15.54■□□□□ 0.08
HIPK3-201ENST00000303296 ACTN1P12814 892 aa15.54■□□□□ 0.08
HIPK3-201ENST00000303296 BRAPQ7Z569 592 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms