RNA–Protein interactions for RNA: ENST00000301873.9

LTBP3-201, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBP3, Length 4,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-201ENST00000301873 NOP56O00567 594 aaKnown RBP22.99■■□□□ 1.27
LTBP3-201ENST00000301873 FAM26FQ5R3K3 315 aa22.99■■□□□ 1.27
LTBP3-201ENST00000301873 CHURC1Q8WUH1 139 aa22.99■■□□□ 1.27
LTBP3-201ENST00000301873 PIGBQ92521 554 aa22.99■■□□□ 1.27
LTBP3-201ENST00000301873 CERKLQ49MI3 558 aaPredicted RBP22.99■■□□□ 1.27
LTBP3-201ENST00000301873 SMAP1Q8IYB5 467 aaPredicted RBP22.99■■□□□ 1.27
LTBP3-201ENST00000301873 CASP14P31944 242 aa22.99■■□□□ 1.27
LTBP3-201ENST00000301873 U2AF1L4Q8WU68 220 aaKnown RBP22.99■■□□□ 1.27
LTBP3-201ENST00000301873 FOXP1Q9H334 677 aaPredicted RBP22.99■■□□□ 1.27
LTBP3-201ENST00000301873 DDAH1O94760 285 aa22.98■■□□□ 1.27
LTBP3-201ENST00000301873 GPR161Q8N6U8 529 aaKnown RBP22.98■■□□□ 1.27
LTBP3-201ENST00000301873 KIAA1524Q8TCG1 905 aa22.98■■□□□ 1.27
LTBP3-201ENST00000301873 MAK16Q9BXY0 300 aaKnown RBP22.98■■□□□ 1.27
LTBP3-201ENST00000301873 TARBP1Q13395 1621 aaKnown RBP22.98■■□□□ 1.27
LTBP3-201ENST00000301873 BCRP11274 1271 aa22.98■■□□□ 1.27
LTBP3-201ENST00000301873 DCUN1D2Q6PH85 259 aa22.98■■□□□ 1.27
LTBP3-201ENST00000301873 TTLL11Q8NHH1 800 aa22.98■■□□□ 1.27
LTBP3-201ENST00000301873 BUB1O43683 1085 aa22.98■■□□□ 1.27
LTBP3-201ENST00000301873 IFNAR1P17181 557 aa22.98■■□□□ 1.27
LTBP3-201ENST00000301873 GSDMAQ96QA5 445 aa22.98■■□□□ 1.27
LTBP3-201ENST00000301873 FERP16591 822 aa22.98■■□□□ 1.27
LTBP3-201ENST00000301873 CCDC105Q8IYK2 499 aa22.98■■□□□ 1.27
LTBP3-201ENST00000301873 ZNF408Q9H9D4 720 aa22.98■■□□□ 1.27
LTBP3-201ENST00000301873 ZBED4O75132 1171 aa22.97■■□□□ 1.27
LTBP3-201ENST00000301873 ALAS1P13196 640 aa22.97■■□□□ 1.27
LTBP3-201ENST00000301873 ATP2A2P16615 1042 aaKnown RBP22.97■■□□□ 1.27
LTBP3-201ENST00000301873 ICA1Q05084 483 aa22.97■■□□□ 1.27
LTBP3-201ENST00000301873 PAK2Q13177 524 aa22.97■■□□□ 1.27
LTBP3-201ENST00000301873 SLFN13Q68D06 897 aa22.97■■□□□ 1.27
LTBP3-201ENST00000301873 GJA10Q969M2 543 aa22.97■■□□□ 1.27
LTBP3-201ENST00000301873 NUCKS1Q9H1E3 243 aaKnown RBP22.97■■□□□ 1.27
LTBP3-201ENST00000301873 HAUS4Q9H6D7 363 aa22.97■■□□□ 1.27
LTBP3-201ENST00000301873 SOS2Q07890 1332 aaPredicted RBP22.97■■□□□ 1.27
LTBP3-201ENST00000301873 DKC1O60832 514 aaKnown RBP eCLIP22.97■■□□□ 1.27
LTBP3-201ENST00000301873 ATG3Q9NT62 314 aa22.97■■□□□ 1.27
LTBP3-201ENST00000301873 AXIN2Q9Y2T1 843 aa22.97■■□□□ 1.27
LTBP3-201ENST00000301873 PPP6R2O75170 966 aa22.96■■□□□ 1.27
LTBP3-201ENST00000301873 TNNI1P19237 187 aa22.96■■□□□ 1.27
LTBP3-201ENST00000301873 POLR2FP61218 127 aaKnown RBP22.96■■□□□ 1.27
LTBP3-201ENST00000301873 RASGRF1Q13972 1273 aa22.96■■□□□ 1.27
LTBP3-201ENST00000301873 HEG1Q9ULI3 1381 aa22.96■■□□□ 1.27
LTBP3-201ENST00000301873 TESPA1A2RU30 521 aaPredicted RBP22.96■■□□□ 1.27
LTBP3-201ENST00000301873 NLRX1Q86UT6 975 aa22.96■■□□□ 1.27
LTBP3-201ENST00000301873 SYNE4Q8N205 404 aa22.96■■□□□ 1.27
LTBP3-201ENST00000301873 TRIM58Q8NG06 486 aa22.96■■□□□ 1.27
LTBP3-201ENST00000301873 SREK1Q8WXA9 508 aaKnown RBP22.96■■□□□ 1.27
LTBP3-201ENST00000301873 SMC6Q96SB8 1091 aa22.96■■□□□ 1.27
LTBP3-201ENST00000301873 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.96■■□□□ 1.27
LTBP3-201ENST00000301873 FAM169AQ9Y6X4 670 aa22.96■■□□□ 1.27
LTBP3-201ENST00000301873 NLRP1Q9C000 1473 aa22.96■■□□□ 1.27
LTBP3-201ENST00000301873 COPB1P53618 953 aaKnown RBP22.96■■□□□ 1.27
LTBP3-201ENST00000301873 RESTQ13127 1097 aa22.96■■□□□ 1.27
LTBP3-201ENST00000301873 FAM196AQ6ZSG2 479 aa22.96■■□□□ 1.27
LTBP3-201ENST00000301873 SPICE1Q8N0Z3 855 aa22.96■■□□□ 1.27
LTBP3-201ENST00000301873 CEP63Q96MT8 703 aa22.96■■□□□ 1.27
LTBP3-201ENST00000301873 PIH1D3Q9NQM4 214 aaKnown RBP22.96■■□□□ 1.27
LTBP3-201ENST00000301873 THRAP3Q9Y2W1 955 aaKnown RBP22.96■■□□□ 1.27
LTBP3-201ENST00000301873 TCP10L2B9ZVM9 353 aa22.96■■□□□ 1.27
LTBP3-201ENST00000301873 LONP1P36776 959 aaKnown RBP22.96■■□□□ 1.27
LTBP3-201ENST00000301873 KRT71Q3SY84 523 aa22.96■■□□□ 1.27
LTBP3-201ENST00000301873 FBXO11Q86XK2 927 aa22.96■■□□□ 1.27
LTBP3-201ENST00000301873 BCORL1Q5H9F3 1711 aa22.95■■□□□ 1.27
LTBP3-201ENST00000301873 H7C1W4 665 aa22.95■■□□□ 1.26
LTBP3-201ENST00000301873 ERFEQ4G0M1 354 aa22.95■■□□□ 1.26
LTBP3-201ENST00000301873 LIN9Q5TKA1 542 aa22.95■■□□□ 1.26
LTBP3-201ENST00000301873 TUBGCP2Q9BSJ2 902 aa22.95■■□□□ 1.26
LTBP3-201ENST00000301873 DDX25Q9UHL0 483 aaKnown RBP22.95■■□□□ 1.26
LTBP3-201ENST00000301873 TMEM232C9JQI7 657 aa22.95■■□□□ 1.26
LTBP3-201ENST00000301873 FMNL1O95466 1100 aaPredicted RBP22.95■■□□□ 1.26
LTBP3-201ENST00000301873 GUCY2FP51841 1108 aa22.95■■□□□ 1.26
LTBP3-201ENST00000301873 ADAM9Q13443 819 aa22.95■■□□□ 1.26
LTBP3-201ENST00000301873 DIXDC1Q155Q3 683 aa22.95■■□□□ 1.26
LTBP3-201ENST00000301873 FAM178BQ8IXR5 827 aa22.95■■□□□ 1.26
LTBP3-201ENST00000301873 PTCH1Q13635 1447 aa22.95■■□□□ 1.26
LTBP3-201ENST00000301873 KCNK3O14649 394 aa22.95■■□□□ 1.26
LTBP3-201ENST00000301873 GABPB1Q06547 395 aaPredicted RBP22.95■■□□□ 1.26
LTBP3-201ENST00000301873 PANK4Q9NVE7 773 aa22.95■■□□□ 1.26
LTBP3-201ENST00000301873 MYO5CQ9NQX4 1742 aa22.95■■□□□ 1.26
LTBP3-201ENST00000301873 RUFY4Q6ZNE9 571 aa22.94■■□□□ 1.26
LTBP3-201ENST00000301873 CCDC127Q96BQ5 260 aa22.94■■□□□ 1.26
LTBP3-201ENST00000301873 KIAA1024Q9UPX6 916 aa22.94■■□□□ 1.26
LTBP3-201ENST00000301873 KDM3AQ9Y4C1 1321 aa22.94■■□□□ 1.26
LTBP3-201ENST00000301873 SH2B2O14492 632 aaPredicted RBP22.94■■□□□ 1.26
LTBP3-201ENST00000301873 PCP11498 1178 aaKnown RBP22.94■■□□□ 1.26
LTBP3-201ENST00000301873 MIER3Q7Z3K6 550 aa22.94■■□□□ 1.26
LTBP3-201ENST00000301873 PGBD1Q96JS3 809 aa22.94■■□□□ 1.26
LTBP3-201ENST00000301873 PODXL2Q9NZ53 605 aa22.94■■□□□ 1.26
LTBP3-201ENST00000301873 USP17L8P0C7I0 530 aa22.94■■□□□ 1.26
LTBP3-201ENST00000301873 SETDB1Q15047 1291 aa22.94■■□□□ 1.26
LTBP3-201ENST00000301873 NIM1KQ8IY84 436 aa22.94■■□□□ 1.26
LTBP3-201ENST00000301873 PCDHB6Q9Y5E3 794 aa22.94■■□□□ 1.26
LTBP3-201ENST00000301873 CLASP1Q7Z460 1538 aa22.93■■□□□ 1.26
LTBP3-201ENST00000301873 PSDA5PKW4 1024 aaPredicted RBP22.93■■□□□ 1.26
LTBP3-201ENST00000301873 CA8P35219 290 aa22.93■■□□□ 1.26
LTBP3-201ENST00000301873 HLFQ16534 295 aa22.93■■□□□ 1.26
LTBP3-201ENST00000301873 GALNT17Q6IS24 598 aa22.93■■□□□ 1.26
LTBP3-201ENST00000301873 ENC1O14682 589 aa22.93■■□□□ 1.26
LTBP3-201ENST00000301873 KRT19P08727 400 aa22.93■■□□□ 1.26
LTBP3-201ENST00000301873 MAP3K9P80192 1104 aa22.93■■□□□ 1.26
LTBP3-201ENST00000301873 PPP1R21Q6ZMI0 780 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms