RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 SAMD1Q6SPF0 538 aaPredicted RBP16.56■□□□□ 0.24
SMG8-201ENST00000300917 CCNT1O60563 726 aaKnown RBP16.56■□□□□ 0.24
SMG8-201ENST00000300917 SNAP25P60880 206 aa16.56■□□□□ 0.24
SMG8-201ENST00000300917 SOGA3Q5TF21 947 aa16.56■□□□□ 0.24
SMG8-201ENST00000300917 TMC4Q7Z404 712 aa16.56■□□□□ 0.24
SMG8-201ENST00000300917 DEFB132Q7Z7B7 95 aa16.56■□□□□ 0.24
SMG8-201ENST00000300917 ANKS1AQ92625 1134 aa16.56■□□□□ 0.24
SMG8-201ENST00000300917 FERMT2Q96AC1 680 aa16.56■□□□□ 0.24
SMG8-201ENST00000300917 OSBPL5Q9H0X9 879 aaPredicted RBP16.56■□□□□ 0.24
SMG8-201ENST00000300917 TCP11L1Q9NUJ3 509 aa16.56■□□□□ 0.24
SMG8-201ENST00000300917 SCAF8Q9UPN6 1271 aaKnown RBP16.56■□□□□ 0.24
SMG8-201ENST00000300917 DDTLA6NHG4 134 aaPredicted RBP16.55■□□□□ 0.24
SMG8-201ENST00000300917 GDF11O95390 407 aa16.55■□□□□ 0.24
SMG8-201ENST00000300917 PDHBP11177 359 aa16.55■□□□□ 0.24
SMG8-201ENST00000300917 TDRD3Q9H7E2 651 aaKnown RBP16.55■□□□□ 0.24
SMG8-201ENST00000300917 SLFN14P0C7P3 912 aa16.55■□□□□ 0.24
SMG8-201ENST00000300917 CD44P16070 742 aaKnown RBP16.55■□□□□ 0.24
SMG8-201ENST00000300917 CUL4BQ13620 913 aa16.55■□□□□ 0.24
SMG8-201ENST00000300917 MED15Q96RN5 788 aa16.55■□□□□ 0.24
SMG8-201ENST00000300917 CCDC178Q5BJE1 867 aa16.55■□□□□ 0.24
SMG8-201ENST00000300917 POTEAQ6S8J7 498 aa16.55■□□□□ 0.24
SMG8-201ENST00000300917 EEF2KMTQ96G04 330 aa16.55■□□□□ 0.24
SMG8-201ENST00000300917 BPIFA3Q9BQP9 254 aa16.55■□□□□ 0.24
SMG8-201ENST00000300917 CDC25BP30305 580 aa16.54■□□□□ 0.24
SMG8-201ENST00000300917 SHMT1P34896 483 aa16.54■□□□□ 0.24
SMG8-201ENST00000300917 TMED8Q6PL24 325 aaPredicted RBP16.54■□□□□ 0.24
SMG8-201ENST00000300917 CCDC148Q8NFR7 591 aa16.54■□□□□ 0.24
SMG8-201ENST00000300917 UBE2SQ16763 222 aa16.54■□□□□ 0.24
SMG8-201ENST00000300917 ARMCX5Q6P1M9 558 aa16.54■□□□□ 0.24
SMG8-201ENST00000300917 GJA10Q969M2 543 aa16.54■□□□□ 0.24
SMG8-201ENST00000300917 SPTLC3Q9NUV7 552 aa16.54■□□□□ 0.24
SMG8-201ENST00000300917 LAMB1P07942 1786 aa16.54■□□□□ 0.24
SMG8-201ENST00000300917 HLA-DOAP06340 250 aa16.53■□□□□ 0.24
SMG8-201ENST00000300917 TAL1P17542 331 aaPredicted RBP16.53■□□□□ 0.24
SMG8-201ENST00000300917 MORC3Q14149 939 aa16.53■□□□□ 0.24
SMG8-201ENST00000300917 DTHD1Q6ZMT9 781 aa16.53■□□□□ 0.24
SMG8-201ENST00000300917 FLAD1Q8NFF5 587 aa16.53■□□□□ 0.24
SMG8-201ENST00000300917 MAST2Q6P0Q8 1798 aa16.53■□□□□ 0.24
SMG8-201ENST00000300917 IKBKBO14920 756 aa16.53■□□□□ 0.24
SMG8-201ENST00000300917 PPIP5K2O43314 1243 aa16.53■□□□□ 0.24
SMG8-201ENST00000300917 RAD17O75943 681 aa16.53■□□□□ 0.24
SMG8-201ENST00000300917 SLC15A2Q16348 729 aa16.53■□□□□ 0.24
SMG8-201ENST00000300917 MTRQ99707 1265 aa16.53■□□□□ 0.24
SMG8-201ENST00000300917 TRIM34Q9BYJ4 488 aa16.53■□□□□ 0.24
SMG8-201ENST00000300917 CLRN2A0PK11 232 aa16.53■□□□□ 0.24
SMG8-201ENST00000300917 STAT6P42226 847 aa16.53■□□□□ 0.24
SMG8-201ENST00000300917 GABPAQ06546 454 aa16.53■□□□□ 0.24
SMG8-201ENST00000300917 CERS3Q8IU89 383 aa16.53■□□□□ 0.24
SMG8-201ENST00000300917 TBCKQ8TEA7 893 aa16.53■□□□□ 0.24
SMG8-201ENST00000300917 ANKRD31Q8N7Z5 1873 aa16.52■□□□□ 0.24
SMG8-201ENST00000300917 NAV1Q8NEY1 1877 aa16.52■□□□□ 0.24
SMG8-201ENST00000300917 BMP15O95972 392 aa16.52■□□□□ 0.24
SMG8-201ENST00000300917 SFPQP23246 707 aaKnown RBP eCLIP16.52■□□□□ 0.24
SMG8-201ENST00000300917 CCZ1BP86790 482 aa16.52■□□□□ 0.24
SMG8-201ENST00000300917 CCZ1P86791 482 aaPredicted RBP16.52■□□□□ 0.24
SMG8-201ENST00000300917 PODNQ7Z5L7 613 aa16.52■□□□□ 0.24
SMG8-201ENST00000300917 IQUBQ8NA54 791 aa16.52■□□□□ 0.24
SMG8-201ENST00000300917 NUP88Q99567 741 aaPredicted RBP16.52■□□□□ 0.24
SMG8-201ENST00000300917 DNAJC18Q9H819 358 aa16.52■□□□□ 0.24
SMG8-201ENST00000300917 TNNT1P13805 278 aa16.52■□□□□ 0.23
SMG8-201ENST00000300917 UBA7P41226 1012 aa16.52■□□□□ 0.23
SMG8-201ENST00000300917 TECP42680 631 aa16.52■□□□□ 0.23
SMG8-201ENST00000300917 TNNI2P48788 182 aa16.52■□□□□ 0.23
SMG8-201ENST00000300917 SARSP49591 514 aaKnown RBP16.52■□□□□ 0.23
SMG8-201ENST00000300917 KANK3Q6NY19 840 aa16.52■□□□□ 0.23
SMG8-201ENST00000300917 C6orf50Q9HD87 102 aa16.52■□□□□ 0.23
SMG8-201ENST00000300917 PPP1R1BQ9UD71 204 aaPredicted RBP16.52■□□□□ 0.23
SMG8-201ENST00000300917 CTNND2Q9UQB3 1225 aa16.52■□□□□ 0.23
SMG8-201ENST00000300917 USP17L10C9JJH3 530 aa16.51■□□□□ 0.23
SMG8-201ENST00000300917 TTLL1O95922 423 aa16.51■□□□□ 0.23
SMG8-201ENST00000300917 DPYDQ12882 1025 aa16.51■□□□□ 0.23
SMG8-201ENST00000300917 RRAGBQ5VZM2 374 aa16.51■□□□□ 0.23
SMG8-201ENST00000300917 C4orf32Q8N8J7 132 aa16.51■□□□□ 0.23
SMG8-201ENST00000300917 TXKP42681 527 aa16.51■□□□□ 0.23
SMG8-201ENST00000300917 IKQ13123 557 aaPredicted RBP16.51■□□□□ 0.23
SMG8-201ENST00000300917 CPLX3Q8WVH0 158 aa16.51■□□□□ 0.23
SMG8-201ENST00000300917 SPZ1Q9BXG8 430 aa16.51■□□□□ 0.23
SMG8-201ENST00000300917 STK32BQ9NY57 414 aa16.51■□□□□ 0.23
SMG8-201ENST00000300917 GDAQ9Y2T3 454 aa16.51■□□□□ 0.23
SMG8-201ENST00000300917 ZBTB12Q9Y330 459 aaPredicted RBP16.51■□□□□ 0.23
SMG8-201ENST00000300917 ADAMTSL1Q8N6G6 1762 aa16.51■□□□□ 0.23
SMG8-201ENST00000300917 DACT2Q5SW24 774 aa16.51■□□□□ 0.23
SMG8-201ENST00000300917 MLKLQ8NB16 471 aa16.51■□□□□ 0.23
SMG8-201ENST00000300917 CCDC34Q96HJ3 373 aa16.51■□□□□ 0.23
SMG8-201ENST00000300917 INTS13Q9NVM9 706 aa16.51■□□□□ 0.23
SMG8-201ENST00000300917 DDX60LQ5H9U9 1706 aaKnown RBP16.51■□□□□ 0.23
SMG8-201ENST00000300917 TCP10L2B9ZVM9 353 aa16.5■□□□□ 0.23
SMG8-201ENST00000300917 TRAPPC10P48553 1259 aa16.5■□□□□ 0.23
SMG8-201ENST00000300917 SEPT2Q15019 361 aa16.5■□□□□ 0.23
SMG8-201ENST00000300917 NONOQ15233 471 aaKnown RBP eCLIP16.5■□□□□ 0.23
SMG8-201ENST00000300917 ADGRF4Q8IZF3 695 aa16.5■□□□□ 0.23
SMG8-201ENST00000300917 REXO1Q8N1G1 1221 aaKnown RBP16.5■□□□□ 0.23
SMG8-201ENST00000300917 SH3GLB2Q9NR46 395 aa16.5■□□□□ 0.23
SMG8-201ENST00000300917 FAM198AQ9UFP1 575 aa16.5■□□□□ 0.23
SMG8-201ENST00000300917 M0R2N6 131 aa16.5■□□□□ 0.23
SMG8-201ENST00000300917 TXLNAP40222 546 aa16.5■□□□□ 0.23
SMG8-201ENST00000300917 POTEDQ86YR6 584 aa16.5■□□□□ 0.23
SMG8-201ENST00000300917 SPICE1Q8N0Z3 855 aa16.5■□□□□ 0.23
SMG8-201ENST00000300917 SH3BP5LQ7L8J4 393 aa16.5■□□□□ 0.23
SMG8-201ENST00000300917 PRMT6Q96LA8 375 aaPredicted RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms