RNA–Protein interactions for RNA: ENST00000300853.7

ERCC1-202, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC1, Length 3,828 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-202ENST00000300853 ATP11AP98196 1134 aa13.15□□□□□ -0.3
ERCC1-202ENST00000300853 RAPGEF1Q13905 1077 aa13.15□□□□□ -0.3
ERCC1-202ENST00000300853 IFI16Q16666 785 aaKnown RBP13.15□□□□□ -0.3
ERCC1-202ENST00000300853 KIAA0753Q2KHM9 967 aa13.15□□□□□ -0.3
ERCC1-202ENST00000300853 SOGA3Q5TF21 947 aa13.15□□□□□ -0.3
ERCC1-202ENST00000300853 MIGA1Q8NAN2 632 aa13.15□□□□□ -0.3
ERCC1-202ENST00000300853 ATG3Q9NT62 314 aa13.15□□□□□ -0.3
ERCC1-202ENST00000300853 SYF2O95926 243 aaKnown RBP13.15□□□□□ -0.3
ERCC1-202ENST00000300853 ERVK-24P63145 666 aa13.15□□□□□ -0.3
ERCC1-202ENST00000300853 RASSF7Q02833 373 aa13.15□□□□□ -0.3
ERCC1-202ENST00000300853 GRIN1Q05586 938 aa13.15□□□□□ -0.3
ERCC1-202ENST00000300853 TOM1L2Q6ZVM7 507 aa13.15□□□□□ -0.3
ERCC1-202ENST00000300853 SPATA4Q8NEY3 305 aa13.15□□□□□ -0.3
ERCC1-202ENST00000300853 RRP36Q96EU6 259 aaKnown RBP13.15□□□□□ -0.3
ERCC1-202ENST00000300853 CALML4Q96GE6 196 aa13.15□□□□□ -0.3
ERCC1-202ENST00000300853 EPN3Q9H201 632 aa13.15□□□□□ -0.3
ERCC1-202ENST00000300853 HAUS2Q9NVX0 235 aa13.15□□□□□ -0.3
ERCC1-202ENST00000300853 TSKSQ9UJT2 592 aa13.15□□□□□ -0.3
ERCC1-202ENST00000300853 ANO9A1A5B4 782 aa13.15□□□□□ -0.3
ERCC1-202ENST00000300853 SH2B2O14492 632 aaPredicted RBP13.15□□□□□ -0.3
ERCC1-202ENST00000300853 NEFHP12036 1026 aa13.15□□□□□ -0.3
ERCC1-202ENST00000300853 ADORA1P30542 326 aa13.15□□□□□ -0.3
ERCC1-202ENST00000300853 CCDC6Q16204 474 aa13.15□□□□□ -0.3
ERCC1-202ENST00000300853 NFRKBQ6P4R8 1299 aa13.15□□□□□ -0.3
ERCC1-202ENST00000300853 PI16Q6UXB8 463 aa13.15□□□□□ -0.3
ERCC1-202ENST00000300853 TMEM139Q8IV31 216 aa13.15□□□□□ -0.3
ERCC1-202ENST00000300853 MB21D2Q8IYB1 491 aaPredicted RBP13.15□□□□□ -0.3
ERCC1-202ENST00000300853 CCDC197Q8NCU1 140 aa13.15□□□□□ -0.3
ERCC1-202ENST00000300853 SMCR8Q8TEV9 937 aaPredicted RBP13.15□□□□□ -0.3
ERCC1-202ENST00000300853 THOC1Q96FV9 657 aaKnown RBP13.15□□□□□ -0.3
ERCC1-202ENST00000300853 UBXN6Q9BZV1 441 aa13.15□□□□□ -0.3
ERCC1-202ENST00000300853 SLC40A1Q9NP59 571 aa13.15□□□□□ -0.3
ERCC1-202ENST00000300853 HPSEQ9Y251 543 aa13.15□□□□□ -0.3
ERCC1-202ENST00000300853 GDAQ9Y2T3 454 aa13.15□□□□□ -0.3
ERCC1-202ENST00000300853 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.15□□□□□ -0.3
ERCC1-202ENST00000300853 HMGB1P1B2RPK0 211 aaPredicted RBP13.14□□□□□ -0.31
ERCC1-202ENST00000300853 GCFC2P16383 781 aaKnown RBP13.14□□□□□ -0.31
ERCC1-202ENST00000300853 EHHADHQ08426 723 aa13.14□□□□□ -0.31
ERCC1-202ENST00000300853 NAA35Q5VZE5 725 aa13.14□□□□□ -0.31
ERCC1-202ENST00000300853 TBC1D1Q86TI0 1168 aaPredicted RBP13.14□□□□□ -0.31
ERCC1-202ENST00000300853 ZNF496Q96IT1 587 aaPredicted RBP13.14□□□□□ -0.31
ERCC1-202ENST00000300853 IFT74Q96LB3 600 aa13.14□□□□□ -0.31
ERCC1-202ENST00000300853 ARMT1Q9H993 441 aa13.14□□□□□ -0.31
ERCC1-202ENST00000300853 RWDD2AQ9UIY3 292 aa13.14□□□□□ -0.31
ERCC1-202ENST00000300853 ZNF532Q9HCE3 1301 aa13.14□□□□□ -0.31
ERCC1-202ENST00000300853 MB21D1Q8N884 522 aa13.14□□□□□ -0.31
ERCC1-202ENST00000300853 ARMC2Q8NEN0 867 aa13.14□□□□□ -0.31
ERCC1-202ENST00000300853 HELBQ8NG08 1087 aaPredicted RBP13.14□□□□□ -0.31
ERCC1-202ENST00000300853 PUS3Q9BZE2 481 aaKnown RBP13.14□□□□□ -0.31
ERCC1-202ENST00000300853 MLXIPQ9HAP2 919 aa13.14□□□□□ -0.31
ERCC1-202ENST00000300853 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.14□□□□□ -0.31
ERCC1-202ENST00000300853 PLAAQ9Y263 795 aa13.14□□□□□ -0.31
ERCC1-202ENST00000300853 RPS6KA1Q15418 735 aa13.14□□□□□ -0.31
ERCC1-202ENST00000300853 ZNF654Q8IZM8 581 aa13.14□□□□□ -0.31
ERCC1-202ENST00000300853 SMARCAL1Q9NZC9 954 aa13.14□□□□□ -0.31
ERCC1-202ENST00000300853 NOVA2Q9UNW9 492 aaKnown RBP13.14□□□□□ -0.31
ERCC1-202ENST00000300853 KCNK3O14649 394 aa13.13□□□□□ -0.31
ERCC1-202ENST00000300853 CTNND1O60716 968 aaKnown RBP13.13□□□□□ -0.31
ERCC1-202ENST00000300853 FMNL1O95466 1100 aaPredicted RBP13.13□□□□□ -0.31
ERCC1-202ENST00000300853 AARSP49588 968 aaKnown RBP eCLIP13.13□□□□□ -0.31
ERCC1-202ENST00000300853 ZBED6P86452 979 aa13.13□□□□□ -0.31
ERCC1-202ENST00000300853 SLC9C1Q4G0N8 1177 aa13.13□□□□□ -0.31
ERCC1-202ENST00000300853 FAM133BQ5BKY9 247 aaKnown RBP13.13□□□□□ -0.31
ERCC1-202ENST00000300853 TCERG1LQ5VWI1 586 aa13.13□□□□□ -0.31
ERCC1-202ENST00000300853 TRAPPC11Q7Z392 1133 aa13.13□□□□□ -0.31
ERCC1-202ENST00000300853 CCDC13Q8IYE1 715 aa13.13□□□□□ -0.31
ERCC1-202ENST00000300853 FBF1Q8TES7 1133 aa13.13□□□□□ -0.31
ERCC1-202ENST00000300853 RNPC3Q96LT9 517 aaKnown RBP13.13□□□□□ -0.31
ERCC1-202ENST00000300853 GMNCA6NCL1 334 aa13.13□□□□□ -0.31
ERCC1-202ENST00000300853 TRIM49BA6NDI0 452 aa13.13□□□□□ -0.31
ERCC1-202ENST00000300853 RAD21O60216 631 aa13.13□□□□□ -0.31
ERCC1-202ENST00000300853 KRT13P13646 458 aa13.13□□□□□ -0.31
ERCC1-202ENST00000300853 ZNF18P17022 549 aa13.13□□□□□ -0.31
ERCC1-202ENST00000300853 HDLBPQ00341 1268 aaKnown RBP13.13□□□□□ -0.31
ERCC1-202ENST00000300853 NAIF1Q69YI7 327 aaPredicted RBP13.13□□□□□ -0.31
ERCC1-202ENST00000300853 KRT26Q7Z3Y9 468 aa13.13□□□□□ -0.31
ERCC1-202ENST00000300853 LMNTD2Q8IXW0 634 aa13.13□□□□□ -0.31
ERCC1-202ENST00000300853 CCDC26Q8TAB7 109 aa13.13□□□□□ -0.31
ERCC1-202ENST00000300853 SAAL1Q96ER3 474 aa13.13□□□□□ -0.31
ERCC1-202ENST00000300853 ZIM3Q96PE6 472 aa13.13□□□□□ -0.31
ERCC1-202ENST00000300853 PPP1R12CQ9BZL4 782 aa13.13□□□□□ -0.31
ERCC1-202ENST00000300853 IFNAR2P48551 515 aa13.13□□□□□ -0.31
ERCC1-202ENST00000300853 MTMR3Q13615 1198 aa13.13□□□□□ -0.31
ERCC1-202ENST00000300853 CCDC25Q86WR0 208 aa13.13□□□□□ -0.31
ERCC1-202ENST00000300853 FANCBQ8NB91 859 aa13.13□□□□□ -0.31
ERCC1-202ENST00000300853 KAT2BQ92831 832 aa13.13□□□□□ -0.31
ERCC1-202ENST00000300853 PAIP2Q9BPZ3 127 aaKnown RBP13.13□□□□□ -0.31
ERCC1-202ENST00000300853 KCNK9Q9NPC2 374 aa13.13□□□□□ -0.31
ERCC1-202ENST00000300853 DMGDHQ9UI17 866 aaKnown RBP13.13□□□□□ -0.31
ERCC1-202ENST00000300853 IQSEC3Q9UPP2 1182 aaPredicted RBP13.13□□□□□ -0.31
ERCC1-202ENST00000300853 PXDNLA1KZ92 1463 aa13.12□□□□□ -0.31
ERCC1-202ENST00000300853 PSMD14O00487 310 aa13.12□□□□□ -0.31
ERCC1-202ENST00000300853 NCK2O43639 380 aa13.12□□□□□ -0.31
ERCC1-202ENST00000300853 FTCDO95954 541 aa13.12□□□□□ -0.31
ERCC1-202ENST00000300853 CPP00450 1065 aa13.12□□□□□ -0.31
ERCC1-202ENST00000300853 UQCRFS1P1P0C7P4 283 aa13.12□□□□□ -0.31
ERCC1-202ENST00000300853 IFNAR1P17181 557 aa13.12□□□□□ -0.31
ERCC1-202ENST00000300853 EEF1GP26641 437 aaKnown RBP13.12□□□□□ -0.31
ERCC1-202ENST00000300853 PTPAQ15257 358 aa13.12□□□□□ -0.31
ERCC1-202ENST00000300853 AKNAD1Q5T1N1 836 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms