RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 SPATA20Q8TB22 786 aa15.13■□□□□ 0.01
CTDP1-202ENST00000299543 GOLGA5Q8TBA6 731 aa15.13■□□□□ 0.01
CTDP1-202ENST00000299543 SETDB2Q96T68 719 aa15.13■□□□□ 0.01
CTDP1-202ENST00000299543 RNF225M0QZC1 329 aaPredicted RBP15.12■□□□□ 0.01
CTDP1-202ENST00000299543 GYPCP04921 128 aa15.12■□□□□ 0.01
CTDP1-202ENST00000299543 UBA7P41226 1012 aa15.12■□□□□ 0.01
CTDP1-202ENST00000299543 ATP2C1P98194 919 aaPredicted RBP15.12■□□□□ 0.01
CTDP1-202ENST00000299543 IL17AQ16552 155 aa15.12■□□□□ 0.01
CTDP1-202ENST00000299543 SLC35F6Q8N357 371 aa15.12■□□□□ 0.01
CTDP1-202ENST00000299543 PNMA1Q8ND90 353 aa15.12■□□□□ 0.01
CTDP1-202ENST00000299543 GOLGA1Q92805 767 aa15.12■□□□□ 0.01
CTDP1-202ENST00000299543 GUCA1BQ9UMX6 200 aa15.12■□□□□ 0.01
CTDP1-202ENST00000299543 MFAP3LO75121 409 aa15.12■□□□□ 0.01
CTDP1-202ENST00000299543 CHMP4BP1P59074 171 aa15.12■□□□□ 0.01
CTDP1-202ENST00000299543 NPY5RQ15761 445 aa15.12■□□□□ 0.01
CTDP1-202ENST00000299543 FAM98CQ17RN3 349 aaKnown RBP15.12■□□□□ 0.01
CTDP1-202ENST00000299543 ELOA2Q8IYF1 753 aaPredicted RBP15.12■□□□□ 0.01
CTDP1-202ENST00000299543 BLIDQ8IZY5 108 aa15.12■□□□□ 0.01
CTDP1-202ENST00000299543 MTRQ99707 1265 aa15.12■□□□□ 0.01
CTDP1-202ENST00000299543 KCNJ18B7U540 433 aa15.11■□□□□ 0.01
CTDP1-202ENST00000299543 DDAH1O94760 285 aa15.11■□□□□ 0.01
CTDP1-202ENST00000299543 RPN1P04843 607 aaKnown RBP15.11■□□□□ 0.01
CTDP1-202ENST00000299543 KIF5BP33176 963 aa15.11■□□□□ 0.01
CTDP1-202ENST00000299543 ACTN2P35609 894 aa15.11■□□□□ 0.01
CTDP1-202ENST00000299543 KCNJ12Q14500 433 aa15.11■□□□□ 0.01
CTDP1-202ENST00000299543 RASGRP2Q7LDG7 609 aa15.11■□□□□ 0.01
CTDP1-202ENST00000299543 PTF1AQ7RTS3 328 aa15.11■□□□□ 0.01
CTDP1-202ENST00000299543 MTA3Q9BTC8 594 aa15.11■□□□□ 0.01
CTDP1-202ENST00000299543 TFR2Q9UP52 801 aa15.11■□□□□ 0.01
CTDP1-202ENST00000299543 ZNF804BA4D1E1 1349 aa15.11■□□□□ 0.01
CTDP1-202ENST00000299543 ERCC3P19447 782 aa15.11■□□□□ 0.01
CTDP1-202ENST00000299543 PRCPP42785 496 aa15.11■□□□□ 0.01
CTDP1-202ENST00000299543 COPB1P53618 953 aaKnown RBP15.11■□□□□ 0.01
CTDP1-202ENST00000299543 RCAN1P53805 252 aa15.11■□□□□ 0.01
CTDP1-202ENST00000299543 APTXQ7Z2E3 356 aaKnown RBP15.11■□□□□ 0.01
CTDP1-202ENST00000299543 CNGA4Q8IV77 575 aa15.11■□□□□ 0.01
CTDP1-202ENST00000299543 LINC00116Q8NCU8 138 aa15.11■□□□□ 0.01
CTDP1-202ENST00000299543 KIFC2Q96AC6 838 aa15.11■□□□□ 0.01
CTDP1-202ENST00000299543 PANX2Q96RD6 677 aa15.11■□□□□ 0.01
CTDP1-202ENST00000299543 PDE11AQ9HCR9 933 aa15.11■□□□□ 0.01
CTDP1-202ENST00000299543 MYH3P11055 1940 aa15.11■□□□□ 0.01
CTDP1-202ENST00000299543 TSPY3P0CV98 308 aa15.11■□□□□ 0.01
CTDP1-202ENST00000299543 TSPY8P0CW00 308 aa15.11■□□□□ 0.01
CTDP1-202ENST00000299543 DTHD1Q6ZMT9 781 aa15.11■□□□□ 0.01
CTDP1-202ENST00000299543 SH3RF1Q7Z6J0 888 aa15.11■□□□□ 0.01
CTDP1-202ENST00000299543 ZNF444Q8N0Y2 327 aaPredicted RBP15.11■□□□□ 0.01
CTDP1-202ENST00000299543 TGFBRAP1Q8WUH2 860 aa15.11■□□□□ 0.01
CTDP1-202ENST00000299543 UBXN6Q9BZV1 441 aa15.11■□□□□ 0.01
CTDP1-202ENST00000299543 FAM205AQ6ZU69 1335 aa15.1■□□□□ 0.01
CTDP1-202ENST00000299543 ZPR1O75312 459 aa15.1■□□□□ 0.01
CTDP1-202ENST00000299543 MNAT1P51948 309 aa15.1■□□□□ 0.01
CTDP1-202ENST00000299543 GPR161Q8N6U8 529 aaKnown RBP15.1■□□□□ 0.01
CTDP1-202ENST00000299543 CCDC102AQ96A19 550 aa15.1■□□□□ 0.01
CTDP1-202ENST00000299543 TRIM47Q96LD4 638 aa15.1■□□□□ 0.01
CTDP1-202ENST00000299543 CHP1Q99653 195 aa15.1■□□□□ 0.01
CTDP1-202ENST00000299543 CXorf56Q9H5V9 222 aa15.1■□□□□ 0.01
CTDP1-202ENST00000299543 BAZ2AQ9UIF9 1905 aaKnown RBP15.1■□□□□ 0.01
CTDP1-202ENST00000299543 LRP6O75581 1613 aa15.1■□□□□ 0.01
CTDP1-202ENST00000299543 PAPPAQ13219 1627 aa15.1■□□□□ 0.01
CTDP1-202ENST00000299543 PFKFB3Q16875 520 aaPredicted RBP15.1■□□□□ 0.01
CTDP1-202ENST00000299543 TSR1Q2NL82 804 aaKnown RBP15.1■□□□□ 0.01
CTDP1-202ENST00000299543 MAPKAPK5Q8IW41 473 aa15.1■□□□□ 0.01
CTDP1-202ENST00000299543 MICALL1Q8N3F8 863 aa15.1■□□□□ 0.01
CTDP1-202ENST00000299543 COL1A1P02452 1464 aaPredicted RBP15.1■□□□□ 0.01
CTDP1-202ENST00000299543 CTAGE9A4FU28 777 aa15.1■□□□□ 0.01
CTDP1-202ENST00000299543 GTPBP6O43824 516 aaPredicted RBP15.1■□□□□ 0.01
CTDP1-202ENST00000299543 CDKAL1Q5VV42 579 aa15.1■□□□□ 0.01
CTDP1-202ENST00000299543 ZNF526Q8TF50 670 aaPredicted RBP15.1■□□□□ 0.01
CTDP1-202ENST00000299543 TMEM60Q9H2L4 133 aa15.1■□□□□ 0.01
CTDP1-202ENST00000299543 TRIM10Q9UDY6 481 aa15.1■□□□□ 0.01
CTDP1-202ENST00000299543 SHANK3Q9BYB0 1731 aa15.1■□□□□ 0.01
CTDP1-202ENST00000299543 ITGB4P16144 1822 aa15.09■□□□□ 0.01
CTDP1-202ENST00000299543 PIP4K2BP78356 416 aa15.09■□□□□ 0.01
CTDP1-202ENST00000299543 ENC1O14682 589 aa15.09■□□□□ 0.01
CTDP1-202ENST00000299543 CLGNO14967 610 aa15.09■□□□□ 0.01
CTDP1-202ENST00000299543 GNPATO15228 680 aa15.09■□□□□ 0.01
CTDP1-202ENST00000299543 FAM193AP78312 1265 aa15.09■□□□□ 0.01
CTDP1-202ENST00000299543 LETM2Q2VYF4 491 aa15.09■□□□□ 0.01
CTDP1-202ENST00000299543 TYW1BQ6NUM6 668 aa15.09■□□□□ 0.01
CTDP1-202ENST00000299543 FBXO33Q7Z6M2 555 aa15.09■□□□□ 0.01
CTDP1-202ENST00000299543 TNFRSF25Q93038 417 aa15.09■□□□□ 0.01
CTDP1-202ENST00000299543 FAN1Q9Y2M0 1017 aa15.09■□□□□ 0.01
CTDP1-202ENST00000299543 CEP83Q9Y592 693 aa15.09■□□□□ 0.01
CTDP1-202ENST00000299543 ERVK-24P63145 666 aa15.08■□□□□ 0.01
CTDP1-202ENST00000299543 SF3B3Q15393 1217 aaKnown RBP15.08■□□□□ 0.01
CTDP1-202ENST00000299543 CCDC178Q5BJE1 867 aa15.08■□□□□ 0.01
CTDP1-202ENST00000299543 TCP11X2Q5H9J9 407 aa15.08■□□□□ 0.01
CTDP1-202ENST00000299543 FUT8Q9BYC5 575 aa15.08■□□□□ 0.01
CTDP1-202ENST00000299543 ATP8A2Q9NTI2 1148 aa15.08■□□□□ 0.01
CTDP1-202ENST00000299543 ECM2O94769 699 aaPredicted RBP15.08■□□□□ 0
CTDP1-202ENST00000299543 CCDC172P0C7W6 258 aa15.08■□□□□ 0
CTDP1-202ENST00000299543 CALML3P27482 149 aa15.08■□□□□ 0
CTDP1-202ENST00000299543 JAKMIP3Q5VZ66 844 aa15.08■□□□□ 0
CTDP1-202ENST00000299543 SH3RF3Q8TEJ3 882 aaPredicted RBP15.08■□□□□ 0
CTDP1-202ENST00000299543 UIMC1Q96RL1 719 aa15.08■□□□□ 0
CTDP1-202ENST00000299543 HINFPQ9BQA5 517 aa15.08■□□□□ 0
CTDP1-202ENST00000299543 MAGEC2Q9UBF1 373 aaPredicted RBP15.08■□□□□ 0
CTDP1-202ENST00000299543 TAF1P21675 1872 aa15.08■□□□□ 0
CTDP1-202ENST00000299543 LDHBP07195 334 aaKnown RBP15.08■□□□□ 0
CTDP1-202ENST00000299543 MAGEA9P43362 315 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms