RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 SLC35G1Q2M3R5 365 aa27.5■■□□□ 1.99
SPTSSA-201ENST00000298130 ZNF658Q5TYW1 1059 aaPredicted RBP27.5■■□□□ 1.99
SPTSSA-201ENST00000298130 C4orf32Q8N8J7 132 aa27.5■■□□□ 1.99
SPTSSA-201ENST00000298130 GPR101Q96P66 508 aaPredicted RBP27.5■■□□□ 1.99
SPTSSA-201ENST00000298130 HDAC6Q9UBN7 1215 aa27.5■■□□□ 1.99
SPTSSA-201ENST00000298130 NAALADL2Q58DX5 795 aa27.49■■□□□ 1.99
SPTSSA-201ENST00000298130 HEATR3Q7Z4Q2 680 aa27.49■■□□□ 1.99
SPTSSA-201ENST00000298130 TTC26A0AVF1 554 aa27.49■■□□□ 1.99
SPTSSA-201ENST00000298130 DIXDC1Q155Q3 683 aa27.49■■□□□ 1.99
SPTSSA-201ENST00000298130 PNMA1Q8ND90 353 aa27.49■■□□□ 1.99
SPTSSA-201ENST00000298130 PARP1P09874 1014 aaKnown RBP27.48■■□□□ 1.99
SPTSSA-201ENST00000298130 RPS8P62241 208 aaKnown RBP27.48■■□□□ 1.99
SPTSSA-201ENST00000298130 SF3B3Q15393 1217 aaKnown RBP27.48■■□□□ 1.99
SPTSSA-201ENST00000298130 NOA1Q8NC60 698 aaKnown RBP27.48■■□□□ 1.99
SPTSSA-201ENST00000298130 KLK7P49862 253 aa27.48■■□□□ 1.99
SPTSSA-201ENST00000298130 GRIK5Q16478 980 aa27.48■■□□□ 1.99
SPTSSA-201ENST00000298130 NKRFO15226 690 aaKnown RBP eCLIP27.48■■□□□ 1.99
SPTSSA-201ENST00000298130 ORC4O43929 436 aa27.48■■□□□ 1.99
SPTSSA-201ENST00000298130 HNRNPH2P55795 449 aaKnown RBP27.48■■□□□ 1.99
SPTSSA-201ENST00000298130 TMTC1Q8IUR5 882 aa27.48■■□□□ 1.99
SPTSSA-201ENST00000298130 STX8Q9UNK0 236 aa27.48■■□□□ 1.99
SPTSSA-201ENST00000298130 REXO2Q9Y3B8 237 aaKnown RBP27.48■■□□□ 1.99
SPTSSA-201ENST00000298130 N4BP1O75113 896 aaKnown RBP27.47■■□□□ 1.99
SPTSSA-201ENST00000298130 ABCB6Q9NP58 842 aa27.47■■□□□ 1.99
SPTSSA-201ENST00000298130 SAP30BPQ9UHR5 308 aaKnown RBP27.47■■□□□ 1.99
SPTSSA-201ENST00000298130 CCDC194A0A1B0GVG4 234 aa27.47■■□□□ 1.99
SPTSSA-201ENST00000298130 SEMA3EO15041 775 aa27.47■■□□□ 1.99
SPTSSA-201ENST00000298130 DZIP1Q86YF9 867 aaKnown RBP27.47■■□□□ 1.99
SPTSSA-201ENST00000298130 UBXN6Q9BZV1 441 aa27.47■■□□□ 1.99
SPTSSA-201ENST00000298130 PDE11AQ9HCR9 933 aa27.47■■□□□ 1.99
SPTSSA-201ENST00000298130 CYP26C1Q6V0L0 522 aa27.46■■□□□ 1.99
SPTSSA-201ENST00000298130 DISC1Q9NRI5 854 aa27.46■■□□□ 1.99
SPTSSA-201ENST00000298130 LRRC10BA6NIK2 292 aa27.46■■□□□ 1.99
SPTSSA-201ENST00000298130 CYTH3O43739 400 aa27.46■■□□□ 1.99
SPTSSA-201ENST00000298130 SRGAP2O75044 1071 aa27.46■■□□□ 1.99
SPTSSA-201ENST00000298130 USP5P45974 858 aa27.46■■□□□ 1.99
SPTSSA-201ENST00000298130 CT47A1Q5JQC4 288 aaPredicted RBP27.46■■□□□ 1.99
SPTSSA-201ENST00000298130 ANKRD20A12PQ8NF67 263 aa27.46■■□□□ 1.99
SPTSSA-201ENST00000298130 HPS3Q969F9 1004 aa27.46■■□□□ 1.99
SPTSSA-201ENST00000298130 NAPGQ99747 312 aaPredicted RBP27.46■■□□□ 1.99
SPTSSA-201ENST00000298130 TTF2Q9UNY4 1162 aaKnown RBP27.46■■□□□ 1.99
SPTSSA-201ENST00000298130 VSNL1P62760 191 aa27.45■■□□□ 1.99
SPTSSA-201ENST00000298130 DTHD1Q6ZMT9 781 aa27.45■■□□□ 1.99
SPTSSA-201ENST00000298130 PHLPP1O60346 1717 aa27.45■■□□□ 1.98
SPTSSA-201ENST00000298130 JAKMIP3Q5VZ66 844 aa27.45■■□□□ 1.98
SPTSSA-201ENST00000298130 SH3RF3Q8TEJ3 882 aaPredicted RBP27.45■■□□□ 1.98
SPTSSA-201ENST00000298130 TRIM47Q96LD4 638 aa27.45■■□□□ 1.98
SPTSSA-201ENST00000298130 HINFPQ9BQA5 517 aa27.45■■□□□ 1.98
SPTSSA-201ENST00000298130 MKNK2Q9HBH9 465 aa27.45■■□□□ 1.98
SPTSSA-201ENST00000298130 PCDHA4Q9UN74 947 aa27.45■■□□□ 1.98
SPTSSA-201ENST00000298130 CCDC66A2RUB6 948 aa27.44■■□□□ 1.98
SPTSSA-201ENST00000298130 CEP112Q8N8E3 955 aa27.44■■□□□ 1.98
SPTSSA-201ENST00000298130 EPN1Q9Y6I3 576 aaPredicted RBP27.44■■□□□ 1.98
SPTSSA-201ENST00000298130 SPATA31A1Q5TZJ5 1347 aa27.44■■□□□ 1.98
SPTSSA-201ENST00000298130 ITIH6Q6UXX5 1313 aa27.44■■□□□ 1.98
SPTSSA-201ENST00000298130 CCDC151A5D8V7 595 aa27.44■■□□□ 1.98
SPTSSA-201ENST00000298130 B4DLN1 442 aa27.44■■□□□ 1.98
SPTSSA-201ENST00000298130 ERCC3P19447 782 aa27.44■■□□□ 1.98
SPTSSA-201ENST00000298130 UBA7P41226 1012 aa27.44■■□□□ 1.98
SPTSSA-201ENST00000298130 PCDHA6Q9UN73 950 aa27.44■■□□□ 1.98
SPTSSA-201ENST00000298130 PCDHA8Q9Y5H6 950 aa27.44■■□□□ 1.98
SPTSSA-201ENST00000298130 ATP8A2Q9NTI2 1148 aa27.43■■□□□ 1.98
SPTSSA-201ENST00000298130 KIF5BP33176 963 aa27.43■■□□□ 1.98
SPTSSA-201ENST00000298130 TRAPPC10P48553 1259 aa27.43■■□□□ 1.98
SPTSSA-201ENST00000298130 BEND6Q5SZJ8 279 aaPredicted RBP27.43■■□□□ 1.98
SPTSSA-201ENST00000298130 ADSSL1Q8N142 457 aa27.43■■□□□ 1.98
SPTSSA-201ENST00000298130 VAT1LQ9HCJ6 419 aa27.43■■□□□ 1.98
SPTSSA-201ENST00000298130 AGPAT5Q9NUQ2 364 aa27.43■■□□□ 1.98
SPTSSA-201ENST00000298130 ARPP21Q9UBL0 812 aaPredicted RBP27.43■■□□□ 1.98
SPTSSA-201ENST00000298130 PHACTR2O75167 634 aa27.43■■□□□ 1.98
SPTSSA-201ENST00000298130 NDUFA10O95299 355 aa27.43■■□□□ 1.98
SPTSSA-201ENST00000298130 LONP1P36776 959 aaKnown RBP27.43■■□□□ 1.98
SPTSSA-201ENST00000298130 CCDC51Q96ER9 411 aa27.43■■□□□ 1.98
SPTSSA-201ENST00000298130 CAPZA3Q96KX2 299 aa27.43■■□□□ 1.98
SPTSSA-201ENST00000298130 NBPF5PQ86XG9 351 aaPredicted RBP27.42■■□□□ 1.98
SPTSSA-201ENST00000298130 MB21D1Q8N884 522 aa27.42■■□□□ 1.98
SPTSSA-201ENST00000298130 MAD2L2Q9UI95 211 aa27.42■■□□□ 1.98
SPTSSA-201ENST00000298130 TGFBRAP1Q8WUH2 860 aa27.42■■□□□ 1.98
SPTSSA-201ENST00000298130 CTAGE15A4D2H0 777 aa27.41■■□□□ 1.98
SPTSSA-201ENST00000298130 CTAGE8P0CG41 777 aa27.41■■□□□ 1.98
SPTSSA-201ENST00000298130 SPAG1Q07617 926 aa27.41■■□□□ 1.98
SPTSSA-201ENST00000298130 CTAGE6Q86UF2 777 aa27.41■■□□□ 1.98
SPTSSA-201ENST00000298130 MAPKAPK5Q8IW41 473 aa27.41■■□□□ 1.98
SPTSSA-201ENST00000298130 CTAGE4Q8IX94 777 aa27.41■■□□□ 1.98
SPTSSA-201ENST00000298130 ZFP91Q96JP5 570 aaPredicted RBP27.41■■□□□ 1.98
SPTSSA-201ENST00000298130 NLRP3Q96P20 1036 aa27.41■■□□□ 1.98
SPTSSA-201ENST00000298130 RMND1Q9NWS8 449 aa27.41■■□□□ 1.98
SPTSSA-201ENST00000298130 ATP8B1O43520 1251 aa27.41■■□□□ 1.98
SPTSSA-201ENST00000298130 GDAP1L1Q96MZ0 367 aa27.41■■□□□ 1.98
SPTSSA-201ENST00000298130 KLRC4O43908 158 aa27.4■■□□□ 1.98
SPTSSA-201ENST00000298130 TSPY3P0CV98 308 aa27.4■■□□□ 1.98
SPTSSA-201ENST00000298130 TSPY8P0CW00 308 aa27.4■■□□□ 1.98
SPTSSA-201ENST00000298130 PCP11498 1178 aaKnown RBP27.4■■□□□ 1.98
SPTSSA-201ENST00000298130 CALML3P27482 149 aa27.4■■□□□ 1.98
SPTSSA-201ENST00000298130 LETM2Q2VYF4 491 aa27.4■■□□□ 1.98
SPTSSA-201ENST00000298130 CCDC178Q5BJE1 867 aa27.4■■□□□ 1.98
SPTSSA-201ENST00000298130 VPS18Q9P253 973 aa27.4■■□□□ 1.98
SPTSSA-201ENST00000298130 LUC7L2Q9Y383 392 aaKnown RBP27.4■■□□□ 1.98
SPTSSA-201ENST00000298130 LMAN1P49257 510 aa27.4■■□□□ 1.98
SPTSSA-201ENST00000298130 BRD3Q15059 726 aa27.4■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms