RNA–Protein interactions for RNA: ENST00000297977.9

HDX-201, Transcript of highly divergent homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDX, Length 6,200 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDX-201ENST00000297977 RUFY3Q7L099 469 aa3.51□□□□□ -1.85
HDX-201ENST00000297977 GIMAP8Q8ND71 665 aaPredicted RBP3.51□□□□□ -1.85
HDX-201ENST00000297977 FAM107BQ9H098 131 aa3.51□□□□□ -1.85
HDX-201ENST00000297977 GBP3Q9H0R5 595 aa3.51□□□□□ -1.85
HDX-201ENST00000297977 PSTPIP2Q9H939 334 aa3.51□□□□□ -1.85
HDX-201ENST00000297977 LUC7LQ9NQ29 371 aaKnown RBP3.51□□□□□ -1.85
HDX-201ENST00000297977 TLR7Q9NYK1 1049 aaKnown RBP3.51□□□□□ -1.85
HDX-201ENST00000297977 ZHX1Q9UKY1 873 aaPredicted RBP3.51□□□□□ -1.85
HDX-201ENST00000297977 MRVI1Q9Y6F6 885 aa3.51□□□□□ -1.85
HDX-201ENST00000297977 V9GY48 417 aaPredicted RBP3.51□□□□□ -1.85
HDX-201ENST00000297977 FLT1P17948 1338 aa3.51□□□□□ -1.85
HDX-201ENST00000297977 MAP2K2P36507 400 aa3.51□□□□□ -1.85
HDX-201ENST00000297977 CAP2P40123 477 aa3.51□□□□□ -1.85
HDX-201ENST00000297977 CETN1Q12798 172 aa3.51□□□□□ -1.85
HDX-201ENST00000297977 JAKMIP3Q5VZ66 844 aa3.51□□□□□ -1.85
HDX-201ENST00000297977 CROCCP2Q86T23 111 aa3.51□□□□□ -1.85
HDX-201ENST00000297977 LRRC47Q8N1G4 583 aaKnown RBP3.51□□□□□ -1.85
HDX-201ENST00000297977 PROCA1Q8NCQ7 364 aaPredicted RBP3.51□□□□□ -1.85
HDX-201ENST00000297977 NKX2-3Q8TAU0 364 aa3.51□□□□□ -1.85
HDX-201ENST00000297977 NSUN6Q8TEA1 469 aaKnown RBP3.51□□□□□ -1.85
HDX-201ENST00000297977 GLG1Q92896 1179 aa3.51□□□□□ -1.85
HDX-201ENST00000297977 MROH8Q9H579 483 aa3.51□□□□□ -1.85
HDX-201ENST00000297977 HOMER2Q9NSB8 354 aa3.51□□□□□ -1.85
HDX-201ENST00000297977 NR2E3Q9Y5X4 410 aa3.51□□□□□ -1.85
HDX-201ENST00000297977 NDUFB9Q9Y6M9 179 aa3.51□□□□□ -1.85
HDX-201ENST00000297977 MORC2Q9Y6X9 1032 aaPredicted RBP3.51□□□□□ -1.85
HDX-201ENST00000297977 ALS2Q96Q42 1657 aa3.51□□□□□ -1.85
HDX-201ENST00000297977 ABCB11O95342 1321 aa3.51□□□□□ -1.85
HDX-201ENST00000297977 WDR19Q8NEZ3 1342 aa3.51□□□□□ -1.85
HDX-201ENST00000297977 POLR3GO15318 223 aaPredicted RBP3.5□□□□□ -1.85
HDX-201ENST00000297977 FGFR1OPO95684 399 aaKnown RBP3.5□□□□□ -1.85
HDX-201ENST00000297977 RPS6KB1P23443 525 aa3.5□□□□□ -1.85
HDX-201ENST00000297977 HSPA4P34932 840 aa3.5□□□□□ -1.85
HDX-201ENST00000297977 CTDSPL2Q05D32 466 aa3.5□□□□□ -1.85
HDX-201ENST00000297977 PPIL2Q13356 520 aa3.5□□□□□ -1.85
HDX-201ENST00000297977 CHST13Q8NET6 341 aa3.5□□□□□ -1.85
HDX-201ENST00000297977 KAZALD1Q96I82 304 aa3.5□□□□□ -1.85
HDX-201ENST00000297977 RNF26Q9BY78 433 aaPredicted RBP3.5□□□□□ -1.85
HDX-201ENST00000297977 SETD1AO15047 1707 aaKnown RBP3.5□□□□□ -1.85
HDX-201ENST00000297977 H0YCG3 227 aa3.5□□□□□ -1.85
HDX-201ENST00000297977 PES1O00541 588 aaKnown RBP3.5□□□□□ -1.85
HDX-201ENST00000297977 TLR3O15455 904 aaKnown RBP3.5□□□□□ -1.85
HDX-201ENST00000297977 RPLP2P05387 115 aaKnown RBP3.5□□□□□ -1.85
HDX-201ENST00000297977 GNAT1P11488 350 aa3.5□□□□□ -1.85
HDX-201ENST00000297977 NEFHP12036 1026 aa3.5□□□□□ -1.85
HDX-201ENST00000297977 MYCLP12524 364 aaPredicted RBP3.5□□□□□ -1.85
HDX-201ENST00000297977 KRT2P35908 639 aa3.5□□□□□ -1.85
HDX-201ENST00000297977 RGS2P41220 211 aa3.5□□□□□ -1.85
HDX-201ENST00000297977 ZNF280AP59817 542 aaPredicted RBP3.5□□□□□ -1.85
HDX-201ENST00000297977 MKRN3Q13064 507 aaKnown RBP3.5□□□□□ -1.85
HDX-201ENST00000297977 NBPF9Q3BBW0 867 aa3.5□□□□□ -1.85
HDX-201ENST00000297977 XRRA1Q6P2D8 792 aa3.5□□□□□ -1.85
HDX-201ENST00000297977 C3orf67Q6ZVT6 689 aa3.5□□□□□ -1.85
HDX-201ENST00000297977 SPICE1Q8N0Z3 855 aa3.5□□□□□ -1.85
HDX-201ENST00000297977 SPATA32Q96LK8 384 aa3.5□□□□□ -1.85
HDX-201ENST00000297977 TMEM39BQ9GZU3 492 aa3.5□□□□□ -1.85
HDX-201ENST00000297977 NRBP2Q9NSY0 501 aa3.5□□□□□ -1.85
HDX-201ENST00000297977 TMA7Q9Y2S6 64 aaKnown RBP3.5□□□□□ -1.85
HDX-201ENST00000297977 DDX49Q9Y6V7 483 aaKnown RBP3.5□□□□□ -1.85
HDX-201ENST00000297977 MSCO60682 206 aa3.5□□□□□ -1.85
HDX-201ENST00000297977 BACE1P56817 501 aa3.5□□□□□ -1.85
HDX-201ENST00000297977 APOBRQ0VD83 1088 aa3.5□□□□□ -1.85
HDX-201ENST00000297977 SYCP1Q15431 976 aa3.5□□□□□ -1.85
HDX-201ENST00000297977 FAM160B1Q5W0V3 765 aa3.5□□□□□ -1.85
HDX-201ENST00000297977 CCDC144CPQ8IYA2 1237 aa3.5□□□□□ -1.85
HDX-201ENST00000297977 ARRDC4Q8NCT1 418 aa3.5□□□□□ -1.85
HDX-201ENST00000297977 ATP6V0A1Q93050 837 aa3.5□□□□□ -1.85
HDX-201ENST00000297977 CAPNS2Q96L46 248 aa3.5□□□□□ -1.85
HDX-201ENST00000297977 ZKSCAN3Q9BRR0 538 aa3.5□□□□□ -1.85
HDX-201ENST00000297977 PDGFDQ9GZP0 370 aaPredicted RBP3.5□□□□□ -1.85
HDX-201ENST00000297977 PUS7LQ9H0K6 701 aaKnown RBP3.5□□□□□ -1.85
HDX-201ENST00000297977 RNF146Q9NTX7 359 aa3.5□□□□□ -1.85
HDX-201ENST00000297977 DDX19AQ9NUU7 478 aaKnown RBP3.5□□□□□ -1.85
HDX-201ENST00000297977 MKRN1Q9UHC7 482 aaKnown RBP3.5□□□□□ -1.85
HDX-201ENST00000297977 ZNF215Q9UL58 517 aaPredicted RBP3.5□□□□□ -1.85
HDX-201ENST00000297977 C10orf71Q711Q0 1435 aa3.5□□□□□ -1.85
HDX-201ENST00000297977 GAKO14976 1311 aa3.5□□□□□ -1.85
HDX-201ENST00000297977 MYPNQ86TC9 1320 aa3.5□□□□□ -1.85
HDX-201ENST00000297977 LPXNO60711 386 aa3.5□□□□□ -1.85
HDX-201ENST00000297977 MCM3P25205 808 aa3.5□□□□□ -1.85
HDX-201ENST00000297977 PTGER2P43116 358 aa3.5□□□□□ -1.85
HDX-201ENST00000297977 CDR1P51861 262 aa3.5□□□□□ -1.85
HDX-201ENST00000297977 IGBP1P78318 339 aa3.5□□□□□ -1.85
HDX-201ENST00000297977 FAM47CQ5HY64 1035 aa3.5□□□□□ -1.85
HDX-201ENST00000297977 SASS6Q6UVJ0 657 aa3.5□□□□□ -1.85
HDX-201ENST00000297977 LRP10Q7Z4F1 713 aa3.5□□□□□ -1.85
HDX-201ENST00000297977 TXNRD3Q86VQ6 643 aa3.5□□□□□ -1.85
HDX-201ENST00000297977 IFNLR1Q8IU57 520 aaPredicted RBP3.5□□□□□ -1.85
HDX-201ENST00000297977 SIRT2Q8IXJ6 389 aa3.5□□□□□ -1.85
HDX-201ENST00000297977 KCNG4Q8TDN1 519 aa3.5□□□□□ -1.85
HDX-201ENST00000297977 ERCC4Q92889 916 aaPredicted RBP3.5□□□□□ -1.85
HDX-201ENST00000297977 SECISBP2LQ93073 1101 aaKnown RBP3.5□□□□□ -1.85
HDX-201ENST00000297977 WDR11Q9BZH6 1224 aa3.5□□□□□ -1.85
HDX-201ENST00000297977 SLC26A4O43511 780 aa3.5□□□□□ -1.85
HDX-201ENST00000297977 OFD1O75665 1012 aa3.5□□□□□ -1.85
HDX-201ENST00000297977 DESP17661 470 aa3.5□□□□□ -1.85
HDX-201ENST00000297977 AP3B2Q13367 1082 aa3.5□□□□□ -1.85
HDX-201ENST00000297977 NEDD9Q14511 834 aa3.5□□□□□ -1.85
HDX-201ENST00000297977 SETDB1Q15047 1291 aa3.5□□□□□ -1.85
HDX-201ENST00000297977 DNTTIP2Q5QJE6 756 aaKnown RBP3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms