RNA–Protein interactions for RNA: ENST00000297537.4

GBX1-201, Transcript of gastrulation brain homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GBX1, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBX1-201ENST00000297537 COL11A1P12107 1806 aaPredicted RBP27.48■■□□□ 1.99
GBX1-201ENST00000297537 ADCY3O60266 1144 aa27.48■■□□□ 1.99
GBX1-201ENST00000297537 SLC25A27O95847 323 aa27.48■■□□□ 1.99
GBX1-201ENST00000297537 FDX1P10109 184 aa27.48■■□□□ 1.99
GBX1-201ENST00000297537 PLS1Q14651 629 aa27.48■■□□□ 1.99
GBX1-201ENST00000297537 RALYLQ86SE5 291 aaKnown RBP27.48■■□□□ 1.99
GBX1-201ENST00000297537 PNMA1Q8ND90 353 aa27.48■■□□□ 1.99
GBX1-201ENST00000297537 MTMR7Q9Y216 660 aa27.48■■□□□ 1.99
GBX1-201ENST00000297537 SLC15A5A6NIM6 579 aa27.47■■□□□ 1.99
GBX1-201ENST00000297537 STRNO43815 780 aa27.47■■□□□ 1.99
GBX1-201ENST00000297537 ZBED4O75132 1171 aa27.47■■□□□ 1.99
GBX1-201ENST00000297537 CAPN15O75808 1086 aa27.47■■□□□ 1.99
GBX1-201ENST00000297537 XRCC5P13010 732 aaKnown RBP27.47■■□□□ 1.99
GBX1-201ENST00000297537 GRB14Q14449 540 aa27.47■■□□□ 1.99
GBX1-201ENST00000297537 ANTXR2P58335 489 aa27.46■■□□□ 1.99
GBX1-201ENST00000297537 ZNF543Q08ER8 600 aa27.46■■□□□ 1.99
GBX1-201ENST00000297537 TSGA10IPQ3SY00 556 aa27.46■■□□□ 1.99
GBX1-201ENST00000297537 TTBK2Q6IQ55 1244 aa27.46■■□□□ 1.99
GBX1-201ENST00000297537 KAT14Q9H8E8 782 aa27.46■■□□□ 1.99
GBX1-201ENST00000297537 ELNP15502 786 aa27.45■■□□□ 1.98
GBX1-201ENST00000297537 CYP2B6P20813 491 aa27.45■■□□□ 1.98
GBX1-201ENST00000297537 OAZ1P54368 228 aa27.45■■□□□ 1.98
GBX1-201ENST00000297537 CCDC96Q2M329 555 aa27.45■■□□□ 1.98
GBX1-201ENST00000297537 IFIT1BQ5T764 474 aaKnown RBP27.45■■□□□ 1.98
GBX1-201ENST00000297537 WDR78Q5VTH9 848 aa27.45■■□□□ 1.98
GBX1-201ENST00000297537 NCAPG2Q86XI2 1143 aa27.45■■□□□ 1.98
GBX1-201ENST00000297537 TEX13BQ9BXU2 312 aa27.45■■□□□ 1.98
GBX1-201ENST00000297537 PRR12Q9ULL5 1215 aa27.45■■□□□ 1.98
GBX1-201ENST00000297537 IVNS1ABPQ9Y6Y0 642 aa27.45■■□□□ 1.98
GBX1-201ENST00000297537 MAP2K5Q13163 448 aa27.44■■□□□ 1.98
GBX1-201ENST00000297537 COL9A3Q14050 684 aaPredicted RBP27.44■■□□□ 1.98
GBX1-201ENST00000297537 RNF20Q5VTR2 975 aa27.44■■□□□ 1.98
GBX1-201ENST00000297537 ABRAQ8N0Z2 381 aa27.44■■□□□ 1.98
GBX1-201ENST00000297537 IGDCC4Q8TDY8 1250 aa27.44■■□□□ 1.98
GBX1-201ENST00000297537 MTA3Q9BTC8 594 aa27.44■■□□□ 1.98
GBX1-201ENST00000297537 CWC22Q9HCG8 908 aaKnown RBP27.44■■□□□ 1.98
GBX1-201ENST00000297537 ISY1Q9ULR0 285 aaKnown RBP27.44■■□□□ 1.98
GBX1-201ENST00000297537 RIPK3Q9Y572 518 aa27.44■■□□□ 1.98
GBX1-201ENST00000297537 ZNF536O15090 1300 aa27.43■■□□□ 1.98
GBX1-201ENST00000297537 FRMPD2Q68DX3 1309 aaPredicted RBP27.43■■□□□ 1.98
GBX1-201ENST00000297537 HOXC6P09630 235 aa27.43■■□□□ 1.98
GBX1-201ENST00000297537 COPB2P35606 906 aa27.43■■□□□ 1.98
GBX1-201ENST00000297537 RGS2P41220 211 aa27.43■■□□□ 1.98
GBX1-201ENST00000297537 IKQ13123 557 aaPredicted RBP27.43■■□□□ 1.98
GBX1-201ENST00000297537 CHST3Q7LGC8 479 aa27.43■■□□□ 1.98
GBX1-201ENST00000297537 RASEFQ8IZ41 740 aa27.43■■□□□ 1.98
GBX1-201ENST00000297537 KCNB2Q92953 911 aa27.43■■□□□ 1.98
GBX1-201ENST00000297537 RAVER2Q9HCJ3 691 aaKnown RBP27.43■■□□□ 1.98
GBX1-201ENST00000297537 GPCPD1Q9NPB8 672 aa27.43■■□□□ 1.98
GBX1-201ENST00000297537 IFIT3O14879 490 aaKnown RBP27.42■■□□□ 1.98
GBX1-201ENST00000297537 SLC16A2P36021 539 aa27.42■■□□□ 1.98
GBX1-201ENST00000297537 GPATCH4Q5T3I0 446 aaKnown RBP27.42■■□□□ 1.98
GBX1-201ENST00000297537 SNRNP48Q6IEG0 339 aaKnown RBP27.42■■□□□ 1.98
GBX1-201ENST00000297537 CPXCR1Q8N123 301 aa27.42■■□□□ 1.98
GBX1-201ENST00000297537 SENP2Q9HC62 589 aa27.42■■□□□ 1.98
GBX1-201ENST00000297537 ADORA2AP29274 412 aa27.41■■□□□ 1.98
GBX1-201ENST00000297537 MTFR1Q15390 333 aa27.41■■□□□ 1.98
GBX1-201ENST00000297537 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.41■■□□□ 1.98
GBX1-201ENST00000297537 TRIB2Q92519 343 aa27.41■■□□□ 1.98
GBX1-201ENST00000297537 APBA2Q99767 749 aa27.41■■□□□ 1.98
GBX1-201ENST00000297537 RANBP17Q9H2T7 1088 aaKnown RBP27.41■■□□□ 1.98
GBX1-201ENST00000297537 EPB41L2O43491 1005 aaKnown RBP27.4■■□□□ 1.98
GBX1-201ENST00000297537 REC8O95072 547 aa27.4■■□□□ 1.98
GBX1-201ENST00000297537 IGHA2P01877 340 aa27.4■■□□□ 1.98
GBX1-201ENST00000297537 MCM5P33992 734 aa27.4■■□□□ 1.98
GBX1-201ENST00000297537 SART3Q15020 963 aaKnown RBP27.4■■□□□ 1.98
GBX1-201ENST00000297537 SYDE2Q5VT97 1194 aa27.4■■□□□ 1.98
GBX1-201ENST00000297537 CTDP1Q9Y5B0 961 aaPredicted RBP27.4■■□□□ 1.98
GBX1-201ENST00000297537 ERICH2A1L162 156 aa27.39■■□□□ 1.98
GBX1-201ENST00000297537 COBLO75128 1261 aa27.39■■□□□ 1.98
GBX1-201ENST00000297537 HMGCRP04035 888 aa27.39■■□□□ 1.98
GBX1-201ENST00000297537 INHAP05111 366 aa27.39■■□□□ 1.98
GBX1-201ENST00000297537 GOLGA8HP0CJ92 632 aa27.39■■□□□ 1.98
GBX1-201ENST00000297537 FCER1AP12319 257 aa27.39■■□□□ 1.98
GBX1-201ENST00000297537 HSPA4P34932 840 aa27.39■■□□□ 1.98
GBX1-201ENST00000297537 UBXN2AP68543 259 aa27.39■■□□□ 1.98
GBX1-201ENST00000297537 WTAPQ15007 396 aa27.39■■□□□ 1.98
GBX1-201ENST00000297537 TRMT44Q8IYL2 757 aaKnown RBP27.39■■□□□ 1.98
GBX1-201ENST00000297537 NPLOC4Q8TAT6 608 aa27.39■■□□□ 1.98
GBX1-201ENST00000297537 BIN2Q9UBW5 565 aaPredicted RBP27.39■■□□□ 1.98
GBX1-201ENST00000297537 ZNF236Q9UL36 1845 aa27.39■■□□□ 1.97
GBX1-201ENST00000297537 PRC1O43663 620 aa27.38■■□□□ 1.97
GBX1-201ENST00000297537 RGS19P49795 217 aa27.38■■□□□ 1.97
GBX1-201ENST00000297537 SOX10P56693 466 aa27.38■■□□□ 1.97
GBX1-201ENST00000297537 SNAP25P60880 206 aa27.38■■□□□ 1.97
GBX1-201ENST00000297537 CCL14Q16627 93 aa27.38■■□□□ 1.97
GBX1-201ENST00000297537 ASPRV1Q53RT3 343 aa27.38■■□□□ 1.97
GBX1-201ENST00000297537 TMEM67Q5HYA8 995 aa27.38■■□□□ 1.97
GBX1-201ENST00000297537 AGBL1Q96MI9 1066 aa27.38■■□□□ 1.97
GBX1-201ENST00000297537 TROAPQ12815 778 aa27.37■■□□□ 1.97
GBX1-201ENST00000297537 ADCK5Q3MIX3 580 aa27.37■■□□□ 1.97
GBX1-201ENST00000297537 CHST13Q8NET6 341 aa27.37■■□□□ 1.97
GBX1-201ENST00000297537 TMEM87BQ96K49 555 aa27.37■■□□□ 1.97
GBX1-201ENST00000297537 NEK1Q96PY6 1258 aa27.37■■□□□ 1.97
GBX1-201ENST00000297537 LY9Q9HBG7 655 aa27.37■■□□□ 1.97
GBX1-201ENST00000297537 FLRT1Q9NZU1 646 aa27.37■■□□□ 1.97
GBX1-201ENST00000297537 POTEFA5A3E0 1075 aa27.36■■□□□ 1.97
GBX1-201ENST00000297537 ICAM1P05362 532 aa27.36■■□□□ 1.97
GBX1-201ENST00000297537 PARP1P09874 1014 aaKnown RBP27.36■■□□□ 1.97
GBX1-201ENST00000297537 ZKSCAN1P17029 563 aaPredicted RBP27.36■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms