RNA–Protein interactions for RNA: ENST00000297350.8

TNFRSF11B-201, Transcript of TNF receptor superfamily member 11b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF11B, Length 2,402 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-201ENST00000297350 ARID3AQ99856 593 aa11.3□□□□□ -0.6
TNFRSF11B-201ENST00000297350 DISC1Q9NRI5 854 aa11.3□□□□□ -0.6
TNFRSF11B-201ENST00000297350 MRFAP1Q9Y605 127 aa11.3□□□□□ -0.6
TNFRSF11B-201ENST00000297350 MYH1P12882 1939 aa11.3□□□□□ -0.6
TNFRSF11B-201ENST00000297350 KIF5CO60282 957 aa11.3□□□□□ -0.6
TNFRSF11B-201ENST00000297350 ERCC6LQ2NKX8 1250 aa11.3□□□□□ -0.6
TNFRSF11B-201ENST00000297350 FAM47AQ5JRC9 791 aa11.3□□□□□ -0.6
TNFRSF11B-201ENST00000297350 BICDL1Q6ZP65 573 aa11.3□□□□□ -0.6
TNFRSF11B-201ENST00000297350 KRT25Q7Z3Z0 450 aa11.3□□□□□ -0.6
TNFRSF11B-201ENST00000297350 RABGGTAQ92696 567 aa11.3□□□□□ -0.6
TNFRSF11B-201ENST00000297350 KIFC2Q96AC6 838 aa11.3□□□□□ -0.6
TNFRSF11B-201ENST00000297350 MKNK2Q9HBH9 465 aa11.3□□□□□ -0.6
TNFRSF11B-201ENST00000297350 BARHL2Q9NY43 387 aa11.3□□□□□ -0.6
TNFRSF11B-201ENST00000297350 CTNND2Q9UQB3 1225 aa11.3□□□□□ -0.6
TNFRSF11B-201ENST00000297350 CDK5RAP2Q96SN8 1893 aa11.3□□□□□ -0.6
TNFRSF11B-201ENST00000297350 A0A1W2PQC6 194 aa11.29□□□□□ -0.6
TNFRSF11B-201ENST00000297350 SPDYE4A6NLX3 237 aa11.29□□□□□ -0.6
TNFRSF11B-201ENST00000297350 GNPATO15228 680 aa11.29□□□□□ -0.6
TNFRSF11B-201ENST00000297350 TUBBP07437 444 aa11.29□□□□□ -0.6
TNFRSF11B-201ENST00000297350 KLRK1P26718 216 aa11.29□□□□□ -0.6
TNFRSF11B-201ENST00000297350 MCM7P33993 719 aa11.29□□□□□ -0.6
TNFRSF11B-201ENST00000297350 ADKP55263 362 aaKnown RBP11.29□□□□□ -0.6
TNFRSF11B-201ENST00000297350 RRAGBQ5VZM2 374 aa11.29□□□□□ -0.6
TNFRSF11B-201ENST00000297350 TMCO3Q6UWJ1 677 aa11.29□□□□□ -0.6
TNFRSF11B-201ENST00000297350 TOGARAM2Q6ZUX3 1019 aa11.29□□□□□ -0.6
TNFRSF11B-201ENST00000297350 ZNF444Q8N0Y2 327 aaPredicted RBP11.29□□□□□ -0.6
TNFRSF11B-201ENST00000297350 THAP9Q9H5L6 903 aa11.29□□□□□ -0.6
TNFRSF11B-201ENST00000297350 TFCP2L1Q9NZI6 479 aa11.29□□□□□ -0.6
TNFRSF11B-201ENST00000297350 ADGRG1Q9Y653 693 aa11.29□□□□□ -0.6
TNFRSF11B-201ENST00000297350 FOCADQ5VW36 1801 aa11.29□□□□□ -0.6
TNFRSF11B-201ENST00000297350 PALM3A6NDB9 673 aaPredicted RBP11.29□□□□□ -0.6
TNFRSF11B-201ENST00000297350 TSPY3P0CV98 308 aa11.29□□□□□ -0.6
TNFRSF11B-201ENST00000297350 TSPY8P0CW00 308 aa11.29□□□□□ -0.6
TNFRSF11B-201ENST00000297350 RBL2Q08999 1139 aa11.29□□□□□ -0.6
TNFRSF11B-201ENST00000297350 TCP11X2Q5H9J9 407 aa11.29□□□□□ -0.6
TNFRSF11B-201ENST00000297350 SLC27A3Q5K4L6 730 aa11.29□□□□□ -0.6
TNFRSF11B-201ENST00000297350 KLHL10Q6JEL2 608 aa11.29□□□□□ -0.6
TNFRSF11B-201ENST00000297350 CYP26C1Q6V0L0 522 aa11.29□□□□□ -0.6
TNFRSF11B-201ENST00000297350 MAD2L2Q9UI95 211 aa11.29□□□□□ -0.6
TNFRSF11B-201ENST00000297350 hCG_1642624A0A1W2PR95 340 aa11.28□□□□□ -0.6
TNFRSF11B-201ENST00000297350 ESYT2A0FGR8 921 aa11.28□□□□□ -0.6
TNFRSF11B-201ENST00000297350 SMIM22K7EJ46 135 aa11.28□□□□□ -0.6
TNFRSF11B-201ENST00000297350 N4BP3O15049 544 aa11.28□□□□□ -0.6
TNFRSF11B-201ENST00000297350 NMT2O60551 498 aa11.28□□□□□ -0.6
TNFRSF11B-201ENST00000297350 CYP2D6P10635 497 aa11.28□□□□□ -0.6
TNFRSF11B-201ENST00000297350 GNA11P29992 359 aa11.28□□□□□ -0.6
TNFRSF11B-201ENST00000297350 COPB1P53618 953 aaKnown RBP11.28□□□□□ -0.6
TNFRSF11B-201ENST00000297350 KRT31Q15323 416 aa11.28□□□□□ -0.6
TNFRSF11B-201ENST00000297350 COBLL1Q53SF7 1204 aa11.28□□□□□ -0.6
TNFRSF11B-201ENST00000297350 FAM196AQ6ZSG2 479 aa11.28□□□□□ -0.6
TNFRSF11B-201ENST00000297350 CEP112Q8N8E3 955 aa11.28□□□□□ -0.6
TNFRSF11B-201ENST00000297350 NELFBQ8WX92 580 aa11.28□□□□□ -0.6
TNFRSF11B-201ENST00000297350 GOLGA1Q92805 767 aa11.28□□□□□ -0.6
TNFRSF11B-201ENST00000297350 DHTKD1Q96HY7 919 aaPredicted RBP11.28□□□□□ -0.6
TNFRSF11B-201ENST00000297350 IL17RBQ9NRM6 502 aa11.28□□□□□ -0.6
TNFRSF11B-201ENST00000297350 PLIN4Q96Q06 1357 aa11.28□□□□□ -0.6
TNFRSF11B-201ENST00000297350 KCNJ18B7U540 433 aa11.28□□□□□ -0.6
TNFRSF11B-201ENST00000297350 STXBP3O00186 592 aa11.28□□□□□ -0.6
TNFRSF11B-201ENST00000297350 WNT7AO00755 349 aa11.28□□□□□ -0.6
TNFRSF11B-201ENST00000297350 PSMA7O14818 248 aa11.28□□□□□ -0.6
TNFRSF11B-201ENST00000297350 RHOBTB3O94955 611 aa11.28□□□□□ -0.6
TNFRSF11B-201ENST00000297350 UBA7P41226 1012 aa11.28□□□□□ -0.6
TNFRSF11B-201ENST00000297350 PPP2R3AQ06190 1150 aa11.28□□□□□ -0.6
TNFRSF11B-201ENST00000297350 KCNJ12Q14500 433 aa11.28□□□□□ -0.6
TNFRSF11B-201ENST00000297350 RSRC2Q7L4I2 434 aaKnown RBP11.28□□□□□ -0.6
TNFRSF11B-201ENST00000297350 FAM114A1Q8IWE2 563 aa11.28□□□□□ -0.6
TNFRSF11B-201ENST00000297350 ADSSL1Q8N142 457 aa11.28□□□□□ -0.6
TNFRSF11B-201ENST00000297350 TBC1D22AQ8WUA7 517 aa11.28□□□□□ -0.6
TNFRSF11B-201ENST00000297350 FAM163AQ96GL9 167 aaPredicted RBP11.28□□□□□ -0.6
TNFRSF11B-201ENST00000297350 ZMYND12Q9H0C1 365 aa11.28□□□□□ -0.6
TNFRSF11B-201ENST00000297350 QTRT2Q9H974 415 aaKnown RBP11.28□□□□□ -0.6
TNFRSF11B-201ENST00000297350 ANKIB1Q9P2G1 1089 aa11.28□□□□□ -0.6
TNFRSF11B-201ENST00000297350 LRRC37AA6NMS7 1700 aa11.27□□□□□ -0.6
TNFRSF11B-201ENST00000297350 TNS1Q9HBL0 1735 aaKnown RBP11.27□□□□□ -0.6
TNFRSF11B-201ENST00000297350 NRXN2Q9P2S2 1712 aa11.27□□□□□ -0.6
TNFRSF11B-201ENST00000297350 BICDL2A1A5D9 508 aa11.27□□□□□ -0.6
TNFRSF11B-201ENST00000297350 WTIPA6NIX2 430 aaPredicted RBP11.27□□□□□ -0.6
TNFRSF11B-201ENST00000297350 TEX33O43247 280 aa11.27□□□□□ -0.6
TNFRSF11B-201ENST00000297350 USP17L8P0C7I0 530 aa11.27□□□□□ -0.6
TNFRSF11B-201ENST00000297350 ATP2B4P23634 1241 aa11.27□□□□□ -0.6
TNFRSF11B-201ENST00000297350 CLCN6P51797 869 aa11.27□□□□□ -0.6
TNFRSF11B-201ENST00000297350 IL17AQ16552 155 aa11.27□□□□□ -0.6
TNFRSF11B-201ENST00000297350 C16orf86Q6ZW13 317 aa11.27□□□□□ -0.6
TNFRSF11B-201ENST00000297350 TMC4Q7Z404 712 aa11.27□□□□□ -0.6
TNFRSF11B-201ENST00000297350 RETREG2Q8NC44 543 aa11.27□□□□□ -0.6
TNFRSF11B-201ENST00000297350 CARD6Q9BX69 1037 aa11.27□□□□□ -0.6
TNFRSF11B-201ENST00000297350 C6orf50Q9HD87 102 aa11.27□□□□□ -0.6
TNFRSF11B-201ENST00000297350 KBTBD4Q9NVX7 518 aa11.27□□□□□ -0.6
TNFRSF11B-201ENST00000297350 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.27□□□□□ -0.6
TNFRSF11B-201ENST00000297350 PCDHA6Q9UN73 950 aa11.27□□□□□ -0.6
TNFRSF11B-201ENST00000297350 PCDHA8Q9Y5H6 950 aa11.27□□□□□ -0.6
TNFRSF11B-201ENST00000297350 V9GYY5 206 aaPredicted RBP11.27□□□□□ -0.6
TNFRSF11B-201ENST00000297350 ZRANB2O95218 330 aaKnown RBP eCLIP11.27□□□□□ -0.61
TNFRSF11B-201ENST00000297350 GYPCP04921 128 aa11.27□□□□□ -0.61
TNFRSF11B-201ENST00000297350 NOVP48745 357 aa11.27□□□□□ -0.61
TNFRSF11B-201ENST00000297350 AMPD3Q01432 767 aa11.27□□□□□ -0.61
TNFRSF11B-201ENST00000297350 HSP90AA4PQ58FG1 418 aa11.27□□□□□ -0.61
TNFRSF11B-201ENST00000297350 NEDD1Q8NHV4 660 aa11.27□□□□□ -0.61
TNFRSF11B-201ENST00000297350 SH3RF3Q8TEJ3 882 aaPredicted RBP11.27□□□□□ -0.61
TNFRSF11B-201ENST00000297350 WDR24Q96S15 920 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms