RNA–Protein interactions for RNA: ENST00000296658.3

CMBL-201, Transcript of carboxymethylenebutenolidase homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMBL, Length 2,335 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMBL-201ENST00000296658 PHLPP2Q6ZVD8 1323 aa16.79■□□□□ 0.28
CMBL-201ENST00000296658 ROBO3Q96MS0 1386 aa16.79■□□□□ 0.28
CMBL-201ENST00000296658 ADAMTSL1Q8N6G6 1762 aa16.79■□□□□ 0.28
CMBL-201ENST00000296658 TOP1P11387 765 aaKnown RBP16.79■□□□□ 0.28
CMBL-201ENST00000296658 PTPREP23469 700 aa16.79■□□□□ 0.28
CMBL-201ENST00000296658 RASSF7Q02833 373 aa16.79■□□□□ 0.28
CMBL-201ENST00000296658 FMR1Q06787 632 aaKnown RBP eCLIP16.79■□□□□ 0.28
CMBL-201ENST00000296658 TBX2Q13207 712 aaPredicted RBP16.79■□□□□ 0.28
CMBL-201ENST00000296658 TNIP1Q15025 636 aa16.79■□□□□ 0.28
CMBL-201ENST00000296658 MAN1B1Q9UKM7 699 aa16.79■□□□□ 0.28
CMBL-201ENST00000296658 PRR29P0C7W0 189 aa16.78■□□□□ 0.28
CMBL-201ENST00000296658 CYP2D6P10635 497 aa16.78■□□□□ 0.28
CMBL-201ENST00000296658 SARSP49591 514 aaKnown RBP16.78■□□□□ 0.28
CMBL-201ENST00000296658 NR5A1Q13285 461 aa16.78■□□□□ 0.28
CMBL-201ENST00000296658 NT5DC1Q5TFE4 455 aa16.78■□□□□ 0.28
CMBL-201ENST00000296658 SHISA4Q96DD7 197 aa16.78■□□□□ 0.28
CMBL-201ENST00000296658 MED15Q96RN5 788 aa16.78■□□□□ 0.28
CMBL-201ENST00000296658 MYH6P13533 1939 aa16.78■□□□□ 0.28
CMBL-201ENST00000296658 POLR2DO15514 142 aaKnown RBP16.78■□□□□ 0.28
CMBL-201ENST00000296658 CCP110O43303 1012 aa16.78■□□□□ 0.28
CMBL-201ENST00000296658 NPM3O75607 178 aaKnown RBP16.78■□□□□ 0.28
CMBL-201ENST00000296658 DEXIO95424 95 aa16.78■□□□□ 0.28
CMBL-201ENST00000296658 ZNF18P17022 549 aa16.78■□□□□ 0.28
CMBL-201ENST00000296658 RBM5P52756 815 aaKnown RBP eCLIP16.78■□□□□ 0.28
CMBL-201ENST00000296658 POSTNQ15063 836 aa16.78■□□□□ 0.28
CMBL-201ENST00000296658 TMTC2Q8N394 836 aa16.78■□□□□ 0.28
CMBL-201ENST00000296658 OXER1Q8TDS5 423 aa16.78■□□□□ 0.28
CMBL-201ENST00000296658 ZSCAN10Q96SZ4 725 aaPredicted RBP16.78■□□□□ 0.28
CMBL-201ENST00000296658 MYH1P12882 1939 aa16.77■□□□□ 0.28
CMBL-201ENST00000296658 FZD9O00144 591 aa16.77■□□□□ 0.28
CMBL-201ENST00000296658 PRELPP51888 382 aa16.77■□□□□ 0.28
CMBL-201ENST00000296658 PCDHB6Q9Y5E3 794 aa16.77■□□□□ 0.28
CMBL-201ENST00000296658 CCDC196A0A1B0GTZ2 297 aa16.76■□□□□ 0.27
CMBL-201ENST00000296658 hCG_1642624A0A1W2PR95 340 aa16.76■□□□□ 0.27
CMBL-201ENST00000296658 SAFBQ15424 915 aaKnown RBP eCLIP16.76■□□□□ 0.27
CMBL-201ENST00000296658 GRAMD1CQ8IYS0 662 aa16.76■□□□□ 0.27
CMBL-201ENST00000296658 OGFOD1Q8N543 542 aa16.76■□□□□ 0.27
CMBL-201ENST00000296658 IDI2Q9BXS1 227 aa16.76■□□□□ 0.27
CMBL-201ENST00000296658 FOXP1Q9H334 677 aaPredicted RBP16.76■□□□□ 0.27
CMBL-201ENST00000296658 SERTAD1Q9UHV2 236 aa16.76■□□□□ 0.27
CMBL-201ENST00000296658 VWA3AA6NCI4 1184 aa16.76■□□□□ 0.27
CMBL-201ENST00000296658 RPS12P25398 132 aaKnown RBP16.76■□□□□ 0.27
CMBL-201ENST00000296658 CLCN6P51797 869 aa16.76■□□□□ 0.27
CMBL-201ENST00000296658 RCAN1P53805 252 aa16.76■□□□□ 0.27
CMBL-201ENST00000296658 RILPL1Q5EBL4 403 aa16.76■□□□□ 0.27
CMBL-201ENST00000296658 USP49Q70CQ1 688 aa16.76■□□□□ 0.27
CMBL-201ENST00000296658 MTMR14Q8NCE2 650 aa16.76■□□□□ 0.27
CMBL-201ENST00000296658 SAP30BPQ9UHR5 308 aaKnown RBP16.76■□□□□ 0.27
CMBL-201ENST00000296658 NFE2L3Q9Y4A8 694 aa16.76■□□□□ 0.27
CMBL-201ENST00000296658 PLEKHA8P1O95397 391 aa16.75■□□□□ 0.27
CMBL-201ENST00000296658 PLCD1P51178 756 aa16.75■□□□□ 0.27
CMBL-201ENST00000296658 EIF6P56537 245 aaKnown RBP16.75■□□□□ 0.27
CMBL-201ENST00000296658 MORC3Q14149 939 aa16.75■□□□□ 0.27
CMBL-201ENST00000296658 TERF2Q15554 542 aa16.75■□□□□ 0.27
CMBL-201ENST00000296658 ARHGAP29Q52LW3 1261 aa16.75■□□□□ 0.27
CMBL-201ENST00000296658 IFIT1BQ5T764 474 aaKnown RBP16.75■□□□□ 0.27
CMBL-201ENST00000296658 ARHGAP27Q6ZUM4 889 aa16.75■□□□□ 0.27
CMBL-201ENST00000296658 FCHSD1Q86WN1 690 aa16.75■□□□□ 0.27
CMBL-201ENST00000296658 PPP2R2CQ9Y2T4 447 aa16.75■□□□□ 0.27
CMBL-201ENST00000296658 ZBTB12Q9Y330 459 aaPredicted RBP16.75■□□□□ 0.27
CMBL-201ENST00000296658 ARHGAP6O43182 974 aa16.75■□□□□ 0.27
CMBL-201ENST00000296658 SLC4A8Q2Y0W8 1093 aa16.75■□□□□ 0.27
CMBL-201ENST00000296658 TRMT44Q8IYL2 757 aaKnown RBP16.75■□□□□ 0.27
CMBL-201ENST00000296658 TC2NQ8N9U0 490 aa16.75■□□□□ 0.27
CMBL-201ENST00000296658 ENOX1Q8TC92 643 aaKnown RBP16.75■□□□□ 0.27
CMBL-201ENST00000296658 ZNF287Q9HBT7 754 aa16.75■□□□□ 0.27
CMBL-201ENST00000296658 DDX4Q9NQI0 724 aaKnown RBP16.75■□□□□ 0.27
CMBL-201ENST00000296658 ST7Q9NRC1 585 aa16.75■□□□□ 0.27
CMBL-201ENST00000296658 PCDHAC2Q9Y5I4 1007 aa16.75■□□□□ 0.27
CMBL-201ENST00000296658 FHOD1Q9Y613 1164 aa16.75■□□□□ 0.27
CMBL-201ENST00000296658 FAM205CA6NFA0 338 aa16.74■□□□□ 0.27
CMBL-201ENST00000296658 NMT2O60551 498 aa16.74■□□□□ 0.27
CMBL-201ENST00000296658 ZNF579Q8NAF0 562 aaKnown RBP16.74■□□□□ 0.27
CMBL-201ENST00000296658 MLKLQ8NB16 471 aa16.74■□□□□ 0.27
CMBL-201ENST00000296658 SPATA20Q8TB22 786 aa16.74■□□□□ 0.27
CMBL-201ENST00000296658 PRMT6Q96LA8 375 aaPredicted RBP16.74■□□□□ 0.27
CMBL-201ENST00000296658 VPS54Q9P1Q0 977 aa16.74■□□□□ 0.27
CMBL-201ENST00000296658 SRPRBQ9Y5M8 271 aaKnown RBP16.74■□□□□ 0.27
CMBL-201ENST00000296658 SPDYE2BA6NHP3 402 aa16.74■□□□□ 0.27
CMBL-201ENST00000296658 ACTN4O43707 911 aaKnown RBP16.74■□□□□ 0.27
CMBL-201ENST00000296658 SPDYE6P0CI01 402 aa16.74■□□□□ 0.27
CMBL-201ENST00000296658 ATP2B1P20020 1258 aa16.74■□□□□ 0.27
CMBL-201ENST00000296658 LMNB1P20700 586 aa16.74■□□□□ 0.27
CMBL-201ENST00000296658 FUT2Q10981 343 aa16.74■□□□□ 0.27
CMBL-201ENST00000296658 PICALMQ13492 652 aa16.74■□□□□ 0.27
CMBL-201ENST00000296658 PKN1Q16512 942 aa16.74■□□□□ 0.27
CMBL-201ENST00000296658 C16orf86Q6ZW13 317 aa16.74■□□□□ 0.27
CMBL-201ENST00000296658 PDILTQ8N807 584 aa16.74■□□□□ 0.27
CMBL-201ENST00000296658 BAG1Q99933 345 aaPredicted RBP16.74■□□□□ 0.27
CMBL-201ENST00000296658 RNF26Q9BY78 433 aaPredicted RBP16.74■□□□□ 0.27
CMBL-201ENST00000296658 HOOK1Q9UJC3 728 aaKnown RBP16.74■□□□□ 0.27
CMBL-201ENST00000296658 DICER1Q9UPY3 1922 aaKnown RBP16.73■□□□□ 0.27
CMBL-201ENST00000296658 URI1O94763 535 aaPredicted RBP16.73■□□□□ 0.27
CMBL-201ENST00000296658 ADKP55263 362 aaKnown RBP16.73■□□□□ 0.27
CMBL-201ENST00000296658 DLGAP5Q15398 846 aa16.73■□□□□ 0.27
CMBL-201ENST00000296658 FAM47AQ5JRC9 791 aa16.73■□□□□ 0.27
CMBL-201ENST00000296658 SPECC1LQ69YQ0 1117 aa16.73■□□□□ 0.27
CMBL-201ENST00000296658 CATIPQ7Z7H3 387 aa16.73■□□□□ 0.27
CMBL-201ENST00000296658 SAMSN1Q9NSI8 373 aaKnown RBP16.73■□□□□ 0.27
CMBL-201ENST00000296658 ZSCAN12O43309 604 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms