RNA–Protein interactions for RNA: ENST00000296273.6

RFC4-201, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC4, Length 1,384 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-201ENST00000296273 USP17L12C9JPN9 530 aa12.65□□□□□ -0.38
RFC4-201ENST00000296273 USP17L21D6R901 530 aa12.65□□□□□ -0.38
RFC4-201ENST00000296273 PQBP1O60828 265 aaKnown RBP12.65□□□□□ -0.38
RFC4-201ENST00000296273 RAB11FIP3O75154 756 aa12.65□□□□□ -0.38
RFC4-201ENST00000296273 ADAMTS4O75173 837 aa12.65□□□□□ -0.38
RFC4-201ENST00000296273 MBD4O95243 580 aa12.65□□□□□ -0.38
RFC4-201ENST00000296273 PGK1P00558 417 aa12.65□□□□□ -0.38
RFC4-201ENST00000296273 PGK2P07205 417 aa12.65□□□□□ -0.38
RFC4-201ENST00000296273 ITGB8P26012 769 aa12.65□□□□□ -0.38
RFC4-201ENST00000296273 CLEC10AQ8IUN9 316 aa12.65□□□□□ -0.38
RFC4-201ENST00000296273 STARD7Q9NQZ5 370 aa12.65□□□□□ -0.38
RFC4-201ENST00000296273 PCDHB15Q9Y5E8 787 aa12.65□□□□□ -0.38
RFC4-201ENST00000296273 MROH7Q68CQ1 1323 aa12.64□□□□□ -0.39
RFC4-201ENST00000296273 SYNGAP1Q96PV0 1343 aa12.64□□□□□ -0.39
RFC4-201ENST00000296273 PRKAB2O43741 272 aa12.64□□□□□ -0.39
RFC4-201ENST00000296273 UBE3CQ15386 1083 aa12.64□□□□□ -0.39
RFC4-201ENST00000296273 ZSCAN25Q6NSZ9 544 aa12.64□□□□□ -0.39
RFC4-201ENST00000296273 CCDC174Q6PII3 467 aa12.64□□□□□ -0.39
RFC4-201ENST00000296273 FBXO28Q9NVF7 368 aa12.64□□□□□ -0.39
RFC4-201ENST00000296273 FAM184BQ9ULE4 1060 aa12.64□□□□□ -0.39
RFC4-201ENST00000296273 EIF5BO60841 1220 aaKnown RBP12.63□□□□□ -0.39
RFC4-201ENST00000296273 TAL1P17542 331 aaPredicted RBP12.63□□□□□ -0.39
RFC4-201ENST00000296273 ATP5JP18859 108 aa12.63□□□□□ -0.39
RFC4-201ENST00000296273 ACLYP53396 1101 aa12.63□□□□□ -0.39
RFC4-201ENST00000296273 FAAP100Q0VG06 881 aa12.63□□□□□ -0.39
RFC4-201ENST00000296273 MAMDC4Q6UXC1 1216 aa12.63□□□□□ -0.39
RFC4-201ENST00000296273 KLHDC9Q8NEP7 349 aa12.63□□□□□ -0.39
RFC4-201ENST00000296273 REPS2Q8NFH8 660 aa12.63□□□□□ -0.39
RFC4-201ENST00000296273 TEX13BQ9BXU2 312 aa12.63□□□□□ -0.39
RFC4-201ENST00000296273 BOLA2Q9H3K6 86 aa12.63□□□□□ -0.39
RFC4-201ENST00000296273 ARPP21Q9UBL0 812 aaPredicted RBP12.63□□□□□ -0.39
RFC4-201ENST00000296273 CUL9Q8IWT3 2517 aa12.63□□□□□ -0.39
RFC4-201ENST00000296273 ELP1O95163 1332 aa12.63□□□□□ -0.39
RFC4-201ENST00000296273 EYSQ5T1H1 3165 aa12.62□□□□□ -0.39
RFC4-201ENST00000296273 ZNFX1Q9P2E3 1918 aaKnown RBP12.62□□□□□ -0.39
RFC4-201ENST00000296273 ATP2A1O14983 1001 aa12.62□□□□□ -0.39
RFC4-201ENST00000296273 RAD21O60216 631 aa12.62□□□□□ -0.39
RFC4-201ENST00000296273 DUSP11O75319 330 aaKnown RBP12.62□□□□□ -0.39
RFC4-201ENST00000296273 TIMP1P01033 207 aa12.62□□□□□ -0.39
RFC4-201ENST00000296273 DNAJB2P25686 324 aa12.62□□□□□ -0.39
RFC4-201ENST00000296273 CST5P28325 142 aaPredicted RBP12.62□□□□□ -0.39
RFC4-201ENST00000296273 EPHB4P54760 987 aa12.62□□□□□ -0.39
RFC4-201ENST00000296273 FAM83BQ5T0W9 1011 aa12.62□□□□□ -0.39
RFC4-201ENST00000296273 ZNF467Q7Z7K2 595 aaPredicted RBP12.62□□□□□ -0.39
RFC4-201ENST00000296273 SMC5Q8IY18 1101 aa12.62□□□□□ -0.39
RFC4-201ENST00000296273 PRPF38AQ8NAV1 312 aaKnown RBP12.62□□□□□ -0.39
RFC4-201ENST00000296273 PCSK9Q8NBP7 692 aaKnown RBP12.62□□□□□ -0.39
RFC4-201ENST00000296273 DDX11Q96FC9 970 aa12.62□□□□□ -0.39
RFC4-201ENST00000296273 GLT1D1Q96MS3 346 aa12.62□□□□□ -0.39
RFC4-201ENST00000296273 HAUS7Q99871 368 aa12.62□□□□□ -0.39
RFC4-201ENST00000296273 SLF1Q9BQI6 1058 aa12.62□□□□□ -0.39
RFC4-201ENST00000296273 SPC25Q9HBM1 224 aa12.62□□□□□ -0.39
RFC4-201ENST00000296273 PRDM6Q9NQX0 595 aa12.62□□□□□ -0.39
RFC4-201ENST00000296273 SLC4A4Q9Y6R1 1079 aa12.62□□□□□ -0.39
RFC4-201ENST00000296273 COL11A1P12107 1806 aaPredicted RBP12.62□□□□□ -0.39
RFC4-201ENST00000296273 PLXNA1Q9UIW2 1896 aa12.62□□□□□ -0.39
RFC4-201ENST00000296273 SYNRGQ9UMZ2 1314 aa12.62□□□□□ -0.39
RFC4-201ENST00000296273 CYP2D7A0A087X1C5 515 aa12.61□□□□□ -0.39
RFC4-201ENST00000296273 APBB1O00213 710 aa12.61□□□□□ -0.39
RFC4-201ENST00000296273 PPIGQ13427 754 aaKnown RBP eCLIP12.61□□□□□ -0.393e-7■■□□□ 11.7
RFC4-201ENST00000296273 KCNA10Q16322 511 aa12.61□□□□□ -0.39
RFC4-201ENST00000296273 SNRNP48Q6IEG0 339 aaKnown RBP12.61□□□□□ -0.39
RFC4-201ENST00000296273 CCSAPQ6IQ19 270 aaPredicted RBP12.61□□□□□ -0.39
RFC4-201ENST00000296273 MFSD5Q6N075 450 aa12.61□□□□□ -0.39
RFC4-201ENST00000296273 CTR9Q6PD62 1173 aa12.61□□□□□ -0.39
RFC4-201ENST00000296273 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.61□□□□□ -0.39
RFC4-201ENST00000296273 IPO9Q96P70 1041 aaKnown RBP12.61□□□□□ -0.39
RFC4-201ENST00000296273 ZNF576Q9H609 170 aa12.61□□□□□ -0.39
RFC4-201ENST00000296273 NYAP2Q9P242 653 aa12.61□□□□□ -0.39
RFC4-201ENST00000296273 DNAJC25-GNG10A0A024R161 153 aa12.6□□□□□ -0.39
RFC4-201ENST00000296273 SNAI1O95863 264 aaPredicted RBP12.6□□□□□ -0.39
RFC4-201ENST00000296273 GRIN2CQ14957 1233 aa12.6□□□□□ -0.39
RFC4-201ENST00000296273 SBK1Q52WX2 424 aa12.6□□□□□ -0.39
RFC4-201ENST00000296273 TJAP1Q5JTD0 557 aa12.6□□□□□ -0.39
RFC4-201ENST00000296273 GIMAP6Q6P9H5 292 aa12.6□□□□□ -0.39
RFC4-201ENST00000296273 TIFAQ96CG3 184 aa12.6□□□□□ -0.39
RFC4-201ENST00000296273 ABHD16BQ9H3Z7 469 aa12.6□□□□□ -0.39
RFC4-201ENST00000296273 FBXO40Q9UH90 709 aa12.6□□□□□ -0.39
RFC4-201ENST00000296273 ZHX1Q9UKY1 873 aaPredicted RBP12.6□□□□□ -0.39
RFC4-201ENST00000296273 TBX21Q9UL17 535 aa12.6□□□□□ -0.39
RFC4-201ENST00000296273 CTDP1Q9Y5B0 961 aaPredicted RBP12.6□□□□□ -0.39
RFC4-201ENST00000296273 U3KPZ7 1027 aaPredicted RBP12.6□□□□□ -0.39
RFC4-201ENST00000296273 VCANP13611 3396 aa12.6□□□□□ -0.39
RFC4-201ENST00000296273 CDH23Q9H251 3354 aa12.6□□□□□ -0.39
RFC4-201ENST00000296273 BAZ2AQ9UIF9 1905 aaKnown RBP12.6□□□□□ -0.39
RFC4-201ENST00000296273 SMCHD1A6NHR9 2005 aa12.59□□□□□ -0.39
RFC4-201ENST00000296273 F5H6K3 240 aa12.59□□□□□ -0.39
RFC4-201ENST00000296273 SMIM22K7EJ46 135 aa12.59□□□□□ -0.39
RFC4-201ENST00000296273 ZBED4O75132 1171 aa12.59□□□□□ -0.39
RFC4-201ENST00000296273 CDK7P50613 346 aa12.59□□□□□ -0.39
RFC4-201ENST00000296273 KLRC3Q07444 240 aa12.59□□□□□ -0.39
RFC4-201ENST00000296273 ACVR2BQ13705 512 aa12.59□□□□□ -0.39
RFC4-201ENST00000296273 SLFNL1Q499Z3 407 aa12.59□□□□□ -0.39
RFC4-201ENST00000296273 TMEM199Q8N511 208 aa12.59□□□□□ -0.39
RFC4-201ENST00000296273 LENG1Q96BZ8 264 aaPredicted RBP12.59□□□□□ -0.39
RFC4-201ENST00000296273 GAS2L1Q99501 681 aaPredicted RBP12.59□□□□□ -0.39
RFC4-201ENST00000296273 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.59□□□□□ -0.391e-6■□□□□ 8.5
RFC4-201ENST00000296273 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.59□□□□□ -0.39
RFC4-201ENST00000296273 PUS7LQ9H0K6 701 aaKnown RBP12.59□□□□□ -0.39
RFC4-201ENST00000296273 MKNK2Q9HBH9 465 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms