RNA–Protein interactions for RNA: ENST00000290330.7

SNF8-201, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNF8, Length 951 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-201ENST00000290330 KCTD2Q14681 263 aa12.42□□□□□ -0.42
SNF8-201ENST00000290330 SLFN13Q68D06 897 aa12.42□□□□□ -0.42
SNF8-201ENST00000290330 RILPL2Q969X0 211 aa12.42□□□□□ -0.42
SNF8-201ENST00000290330 MMP19Q99542 508 aa12.42□□□□□ -0.42
SNF8-201ENST00000290330 TEX13BQ9BXU2 312 aa12.42□□□□□ -0.42
SNF8-201ENST00000290330 PRO3102Q9H379 93 aa12.42□□□□□ -0.42
SNF8-201ENST00000290330 IL17RBQ9NRM6 502 aa12.42□□□□□ -0.42
SNF8-201ENST00000290330 RBM27Q9P2N5 1060 aaKnown RBP12.42□□□□□ -0.42
SNF8-201ENST00000290330 TSPY2A6NKD2 308 aa12.41□□□□□ -0.42
SNF8-201ENST00000290330 ATP2A1O14983 1001 aa12.41□□□□□ -0.42
SNF8-201ENST00000290330 PGK2P07205 417 aa12.41□□□□□ -0.42
SNF8-201ENST00000290330 FGRP09769 529 aa12.41□□□□□ -0.42
SNF8-201ENST00000290330 HSPD1P10809 573 aaKnown RBP12.41□□□□□ -0.42
SNF8-201ENST00000290330 BMP3P12645 472 aa12.41□□□□□ -0.42
SNF8-201ENST00000290330 SDSP20132 328 aa12.41□□□□□ -0.42
SNF8-201ENST00000290330 FXR1P51114 621 aaKnown RBP eCLIP12.41□□□□□ -0.42
SNF8-201ENST00000290330 ZNF792Q3KQV3 632 aa12.41□□□□□ -0.42
SNF8-201ENST00000290330 PRAMEF19Q5SWL8 479 aa12.41□□□□□ -0.42
SNF8-201ENST00000290330 SNRNP48Q6IEG0 339 aaKnown RBP12.41□□□□□ -0.42
SNF8-201ENST00000290330 ZNF589Q86UQ0 364 aaPredicted RBP12.41□□□□□ -0.42
SNF8-201ENST00000290330 KIFC2Q96AC6 838 aa12.41□□□□□ -0.42
SNF8-201ENST00000290330 FEM1BQ9UK73 627 aa12.41□□□□□ -0.42
SNF8-201ENST00000290330 DIS3Q9Y2L1 958 aaKnown RBP12.41□□□□□ -0.42
SNF8-201ENST00000290330 RIPK3Q9Y572 518 aa12.41□□□□□ -0.42
SNF8-201ENST00000290330 SEPT4O43236 478 aa12.4□□□□□ -0.42
SNF8-201ENST00000290330 ORC4O43929 436 aa12.4□□□□□ -0.42
SNF8-201ENST00000290330 RANBP6O60518 1105 aaKnown RBP12.4□□□□□ -0.42
SNF8-201ENST00000290330 NMT2O60551 498 aa12.4□□□□□ -0.42
SNF8-201ENST00000290330 ZBED4O75132 1171 aa12.4□□□□□ -0.42
SNF8-201ENST00000290330 NOVP48745 357 aa12.4□□□□□ -0.42
SNF8-201ENST00000290330 PPP4R3BQ5MIZ7 849 aa12.4□□□□□ -0.42
SNF8-201ENST00000290330 C7orf61Q8IZ16 206 aa12.4□□□□□ -0.42
SNF8-201ENST00000290330 CPXCR1Q8N123 301 aa12.4□□□□□ -0.42
SNF8-201ENST00000290330 GMCL1Q96IK5 515 aa12.4□□□□□ -0.42
SNF8-201ENST00000290330 SLC38A10Q9HBR0 1119 aa12.4□□□□□ -0.42
SNF8-201ENST00000290330 RAVER2Q9HCJ3 691 aaKnown RBP12.4□□□□□ -0.42
SNF8-201ENST00000290330 STX8Q9UNK0 236 aa12.4□□□□□ -0.42
SNF8-201ENST00000290330 CCDC171Q6TFL3 1326 aa12.39□□□□□ -0.43
SNF8-201ENST00000290330 COL11A1P12107 1806 aaPredicted RBP12.39□□□□□ -0.43
SNF8-201ENST00000290330 TMEM232C9JQI7 657 aa12.39□□□□□ -0.43
SNF8-201ENST00000290330 MCCP23508 829 aa12.39□□□□□ -0.43
SNF8-201ENST00000290330 SLC1A4P43007 532 aa12.39□□□□□ -0.43
SNF8-201ENST00000290330 TINF2Q9BSI4 451 aa12.39□□□□□ -0.43
SNF8-201ENST00000290330 PPP4R2Q9NY27 417 aa12.39□□□□□ -0.43
SNF8-201ENST00000290330 NRBP1Q9UHY1 535 aa12.39□□□□□ -0.43
SNF8-201ENST00000290330 ZMYND8Q9ULU4 1186 aaPredicted RBP12.39□□□□□ -0.43
SNF8-201ENST00000290330 CTDP1Q9Y5B0 961 aaPredicted RBP12.39□□□□□ -0.43
SNF8-201ENST00000290330 ZMYM6O95789 1325 aa12.38□□□□□ -0.43
SNF8-201ENST00000290330 DNAJC25-GNG10A0A024R161 153 aa12.38□□□□□ -0.43
SNF8-201ENST00000290330 DNM1LO00429 736 aa12.38□□□□□ -0.43
SNF8-201ENST00000290330 FDX1P10109 184 aa12.38□□□□□ -0.43
SNF8-201ENST00000290330 SLC4A3P48751 1232 aa12.38□□□□□ -0.43
SNF8-201ENST00000290330 STAT2P52630 851 aa12.38□□□□□ -0.43
SNF8-201ENST00000290330 OAZ1P54368 228 aa12.38□□□□□ -0.43
SNF8-201ENST00000290330 LRRC26Q2I0M4 334 aa12.38□□□□□ -0.43
SNF8-201ENST00000290330 ANO1Q5XXA6 986 aa12.38□□□□□ -0.43
SNF8-201ENST00000290330 ARRDC4Q8NCT1 418 aa12.38□□□□□ -0.43
SNF8-201ENST00000290330 CHURC1Q8WUH1 139 aa12.38□□□□□ -0.43
SNF8-201ENST00000290330 STAG1Q8WVM7 1258 aa12.38□□□□□ -0.43
SNF8-201ENST00000290330 CHMP4CQ96CF2 233 aa12.38□□□□□ -0.43
SNF8-201ENST00000290330 DDX11Q96FC9 970 aa12.38□□□□□ -0.43
SNF8-201ENST00000290330 SENP6Q9GZR1 1112 aaPredicted RBP12.38□□□□□ -0.43
SNF8-201ENST00000290330 TOMM22Q9NS69 142 aa12.38□□□□□ -0.43
SNF8-201ENST00000290330 CEP290O15078 2479 aa12.38□□□□□ -0.43
SNF8-201ENST00000290330 ALPK3Q96L96 1907 aa12.38□□□□□ -0.43
SNF8-201ENST00000290330 MYH4Q9Y623 1939 aa12.37□□□□□ -0.43
SNF8-201ENST00000290330 PLA2G6O60733 806 aa12.37□□□□□ -0.43
SNF8-201ENST00000290330 SYN1P17600 705 aa12.37□□□□□ -0.43
SNF8-201ENST00000290330 MFAP1P55081 439 aaKnown RBP12.37□□□□□ -0.43
SNF8-201ENST00000290330 HAND2P61296 217 aa12.37□□□□□ -0.43
SNF8-201ENST00000290330 RRP12Q5JTH9 1297 aaKnown RBP12.37□□□□□ -0.43
SNF8-201ENST00000290330 GJC2Q5T442 439 aaPredicted RBP12.37□□□□□ -0.43
SNF8-201ENST00000290330 RCSD1Q6JBY9 416 aa12.37□□□□□ -0.43
SNF8-201ENST00000290330 CWC27Q6UX04 472 aaKnown RBP12.37□□□□□ -0.43
SNF8-201ENST00000290330 KCTD1Q719H9 257 aa12.37□□□□□ -0.43
SNF8-201ENST00000290330 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.37□□□□□ -0.43
SNF8-201ENST00000290330 RASGRP2Q7LDG7 609 aa12.37□□□□□ -0.43
SNF8-201ENST00000290330 FAM160B2Q86V87 743 aa12.37□□□□□ -0.43
SNF8-201ENST00000290330 CHST13Q8NET6 341 aa12.37□□□□□ -0.43
SNF8-201ENST00000290330 GDF15Q99988 308 aa12.37□□□□□ -0.43
SNF8-201ENST00000290330 TCP11L1Q9NUJ3 509 aa12.37□□□□□ -0.43
SNF8-201ENST00000290330 FBXO40Q9UH90 709 aa12.37□□□□□ -0.43
SNF8-201ENST00000290330 ISY1Q9ULR0 285 aaKnown RBP12.37□□□□□ -0.43
SNF8-201ENST00000290330 ZNF536O15090 1300 aa12.37□□□□□ -0.43
SNF8-201ENST00000290330 A0A1W2PPC1 479 aa12.36□□□□□ -0.43
SNF8-201ENST00000290330 ZNF865P0CJ78 1059 aaPredicted RBP12.36□□□□□ -0.43
SNF8-201ENST00000290330 PCP11498 1178 aaKnown RBP12.36□□□□□ -0.43
SNF8-201ENST00000290330 TAL1P17542 331 aaPredicted RBP12.36□□□□□ -0.43
SNF8-201ENST00000290330 IKQ13123 557 aaPredicted RBP12.36□□□□□ -0.43
SNF8-201ENST00000290330 AKNAD1Q5T1N1 836 aa12.36□□□□□ -0.43
SNF8-201ENST00000290330 MAMDC4Q6UXC1 1216 aa12.36□□□□□ -0.43
SNF8-201ENST00000290330 ANKRD35Q8N283 1001 aa12.36□□□□□ -0.43
SNF8-201ENST00000290330 MSL3Q8N5Y2 521 aaKnown RBP12.36□□□□□ -0.43
SNF8-201ENST00000290330 DIAPH3Q9NSV4 1193 aa12.36□□□□□ -0.43
SNF8-201ENST00000290330 FRMPD3Q5JV73 1810 aa12.35□□□□□ -0.43
SNF8-201ENST00000290330 HIP1O00291 1037 aa12.35□□□□□ -0.43
SNF8-201ENST00000290330 SNAI1O95863 264 aaPredicted RBP12.35□□□□□ -0.43
SNF8-201ENST00000290330 TOP1P11387 765 aaKnown RBP12.35□□□□□ -0.43
SNF8-201ENST00000290330 PDE4AP27815 886 aa12.35□□□□□ -0.43
SNF8-201ENST00000290330 BMP8BP34820 402 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms