RNA–Protein interactions for RNA: ENST00000281834.3

TNFSF4-201, Transcript of TNF superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF4, Length 3,470 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-201ENST00000281834 PCDHA8Q9Y5H6 950 aa6.85□□□□□ -1.31
TNFSF4-201ENST00000281834 TEX33O43247 280 aa6.85□□□□□ -1.31
TNFSF4-201ENST00000281834 RAD17O75943 681 aa6.85□□□□□ -1.31
TNFSF4-201ENST00000281834 HLA-DOAP06340 250 aa6.85□□□□□ -1.31
TNFSF4-201ENST00000281834 ALDH1B1P30837 517 aa6.85□□□□□ -1.31
TNFSF4-201ENST00000281834 PDE6BP35913 854 aa6.85□□□□□ -1.31
TNFSF4-201ENST00000281834 CCZ1BP86790 482 aa6.85□□□□□ -1.31
TNFSF4-201ENST00000281834 CCZ1P86791 482 aaPredicted RBP6.85□□□□□ -1.31
TNFSF4-201ENST00000281834 MDM2Q00987 491 aaPredicted RBP6.85□□□□□ -1.31
TNFSF4-201ENST00000281834 RAD51AP2Q09MP3 1159 aa6.85□□□□□ -1.31
TNFSF4-201ENST00000281834 CCDC112Q8NEF3 446 aa6.85□□□□□ -1.31
TNFSF4-201ENST00000281834 NEDD1Q8NHV4 660 aa6.85□□□□□ -1.31
TNFSF4-201ENST00000281834 HPS3Q969F9 1004 aa6.85□□□□□ -1.31
TNFSF4-201ENST00000281834 SPTLC3Q9NUV7 552 aa6.85□□□□□ -1.31
TNFSF4-201ENST00000281834 DUOX1Q9NRD9 1551 aa6.85□□□□□ -1.31
TNFSF4-201ENST00000281834 TRIM49BA6NDI0 452 aa6.84□□□□□ -1.31
TNFSF4-201ENST00000281834 STXBP3O00186 592 aa6.84□□□□□ -1.31
TNFSF4-201ENST00000281834 HOXA10P31260 410 aaPredicted RBP6.84□□□□□ -1.31
TNFSF4-201ENST00000281834 CRKP46108 304 aa6.84□□□□□ -1.31
TNFSF4-201ENST00000281834 GSDMDP57764 484 aa6.84□□□□□ -1.31
TNFSF4-201ENST00000281834 EZH2Q15910 746 aaKnown RBP6.84□□□□□ -1.31
TNFSF4-201ENST00000281834 USH1GQ495M9 461 aa6.84□□□□□ -1.31
TNFSF4-201ENST00000281834 KANK3Q6NY19 840 aa6.84□□□□□ -1.31
TNFSF4-201ENST00000281834 SYT10Q6XYQ8 523 aa6.84□□□□□ -1.31
TNFSF4-201ENST00000281834 REXO1Q8N1G1 1221 aaKnown RBP6.84□□□□□ -1.31
TNFSF4-201ENST00000281834 TNFRSF25Q93038 417 aa6.84□□□□□ -1.31
TNFSF4-201ENST00000281834 MASTLQ96GX5 879 aa6.84□□□□□ -1.31
TNFSF4-201ENST00000281834 C6orf50Q9HD87 102 aa6.84□□□□□ -1.31
TNFSF4-201ENST00000281834 BARHL2Q9NY43 387 aa6.84□□□□□ -1.31
TNFSF4-201ENST00000281834 SYNRGQ9UMZ2 1314 aa6.84□□□□□ -1.31
TNFSF4-201ENST00000281834 C4BP0C0L5 1744 aa6.84□□□□□ -1.31
TNFSF4-201ENST00000281834 COL5A3P25940 1745 aaPredicted RBP6.84□□□□□ -1.31
TNFSF4-201ENST00000281834 A0A0U1RQG5 324 aaPredicted RBP6.84□□□□□ -1.31
TNFSF4-201ENST00000281834 TCP10L2B9ZVM9 353 aa6.84□□□□□ -1.31
TNFSF4-201ENST00000281834 PPIP5K2O43314 1243 aa6.84□□□□□ -1.31
TNFSF4-201ENST00000281834 CBFA2T2O43439 604 aa6.84□□□□□ -1.31
TNFSF4-201ENST00000281834 PDHBP11177 359 aa6.84□□□□□ -1.31
TNFSF4-201ENST00000281834 IDEP14735 1019 aa6.84□□□□□ -1.31
TNFSF4-201ENST00000281834 DYMQ7RTS9 669 aa6.84□□□□□ -1.31
TNFSF4-201ENST00000281834 MLKLQ8NB16 471 aa6.84□□□□□ -1.31
TNFSF4-201ENST00000281834 MYRIPQ8NFW9 859 aa6.84□□□□□ -1.31
TNFSF4-201ENST00000281834 ZFP91Q96JP5 570 aaPredicted RBP6.84□□□□□ -1.31
TNFSF4-201ENST00000281834 MED15Q96RN5 788 aa6.84□□□□□ -1.31
TNFSF4-201ENST00000281834 VEZTQ9HBM0 779 aa6.84□□□□□ -1.31
TNFSF4-201ENST00000281834 TCP11L1Q9NUJ3 509 aa6.84□□□□□ -1.31
TNFSF4-201ENST00000281834 MTMR4Q9NYA4 1195 aa6.84□□□□□ -1.31
TNFSF4-201ENST00000281834 TAB2Q9NYJ8 693 aa6.84□□□□□ -1.31
TNFSF4-201ENST00000281834 DACH1Q9UI36 760 aa6.84□□□□□ -1.31
TNFSF4-201ENST00000281834 PDS5AQ29RF7 1337 aaKnown RBP6.84□□□□□ -1.31
TNFSF4-201ENST00000281834 PALM3A6NDB9 673 aaPredicted RBP6.84□□□□□ -1.32
TNFSF4-201ENST00000281834 DDTLA6NHG4 134 aaPredicted RBP6.84□□□□□ -1.32
TNFSF4-201ENST00000281834 USP17L10C9JJH3 530 aa6.84□□□□□ -1.32
TNFSF4-201ENST00000281834 IKBKBO14920 756 aa6.84□□□□□ -1.32
TNFSF4-201ENST00000281834 ECE2O60344 883 aa6.84□□□□□ -1.32
TNFSF4-201ENST00000281834 TDP2O95551 362 aa6.84□□□□□ -1.32
TNFSF4-201ENST00000281834 BMP15O95972 392 aa6.84□□□□□ -1.32
TNFSF4-201ENST00000281834 RXRBP28702 533 aa6.84□□□□□ -1.32
TNFSF4-201ENST00000281834 CDC25BP30305 580 aa6.84□□□□□ -1.32
TNFSF4-201ENST00000281834 DPYDQ12882 1025 aa6.84□□□□□ -1.32
TNFSF4-201ENST00000281834 MORC3Q14149 939 aa6.84□□□□□ -1.32
TNFSF4-201ENST00000281834 NONOQ15233 471 aaKnown RBP eCLIP6.84□□□□□ -1.32
TNFSF4-201ENST00000281834 POTEDQ86YR6 584 aa6.84□□□□□ -1.32
TNFSF4-201ENST00000281834 ZHX3Q9H4I2 956 aa6.84□□□□□ -1.32
TNFSF4-201ENST00000281834 ZBTB12Q9Y330 459 aaPredicted RBP6.84□□□□□ -1.32
TNFSF4-201ENST00000281834 POTEMA6NI47 508 aa6.83□□□□□ -1.32
TNFSF4-201ENST00000281834 USP17L15C9J2P7 530 aa6.83□□□□□ -1.32
TNFSF4-201ENST00000281834 USP17L13C9JLJ4 530 aa6.83□□□□□ -1.32
TNFSF4-201ENST00000281834 USP17L11C9JVI0 530 aa6.83□□□□□ -1.32
TNFSF4-201ENST00000281834 USP17L18D6R9N7 530 aa6.83□□□□□ -1.32
TNFSF4-201ENST00000281834 USP17L22D6RA61 530 aa6.83□□□□□ -1.32
TNFSF4-201ENST00000281834 USP17L17D6RBQ6 530 aa6.83□□□□□ -1.32
TNFSF4-201ENST00000281834 USP17L19D6RCP7 530 aa6.83□□□□□ -1.32
TNFSF4-201ENST00000281834 USP17L20D6RJB6 530 aa6.83□□□□□ -1.32
TNFSF4-201ENST00000281834 N4BP3O15049 544 aa6.83□□□□□ -1.32
TNFSF4-201ENST00000281834 NEMFO60524 1076 aa6.83□□□□□ -1.32
TNFSF4-201ENST00000281834 SLC1A4P43007 532 aa6.83□□□□□ -1.32
TNFSF4-201ENST00000281834 ASIC1P78348 528 aa6.83□□□□□ -1.32
TNFSF4-201ENST00000281834 USP17L24Q0WX57 530 aa6.83□□□□□ -1.32
TNFSF4-201ENST00000281834 USP17L6PQ6QN14 398 aa6.83□□□□□ -1.32
TNFSF4-201ENST00000281834 TRMT1LQ7Z2T5 733 aaKnown RBP6.83□□□□□ -1.32
TNFSF4-201ENST00000281834 DEFB132Q7Z7B7 95 aa6.83□□□□□ -1.32
TNFSF4-201ENST00000281834 CCAR2Q8N163 923 aaKnown RBP6.83□□□□□ -1.32
TNFSF4-201ENST00000281834 ZNF579Q8NAF0 562 aaKnown RBP6.83□□□□□ -1.32
TNFSF4-201ENST00000281834 CDK5RAP3Q96JB5 506 aa6.83□□□□□ -1.32
TNFSF4-201ENST00000281834 MTRQ99707 1265 aa6.83□□□□□ -1.32
TNFSF4-201ENST00000281834 INTS13Q9NVM9 706 aa6.83□□□□□ -1.32
TNFSF4-201ENST00000281834 PODXL2Q9NZ53 605 aa6.83□□□□□ -1.32
TNFSF4-201ENST00000281834 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.83□□□□□ -1.32
TNFSF4-201ENST00000281834 CHD4Q14839 1912 aa6.83□□□□□ -1.32
TNFSF4-201ENST00000281834 GNA11P29992 359 aa6.83□□□□□ -1.32
TNFSF4-201ENST00000281834 SEPT2Q15019 361 aa6.83□□□□□ -1.32
TNFSF4-201ENST00000281834 RBM26Q5T8P6 1007 aaKnown RBP6.83□□□□□ -1.32
TNFSF4-201ENST00000281834 E4F1Q66K89 784 aaPredicted RBP6.83□□□□□ -1.32
TNFSF4-201ENST00000281834 APOBEC3HQ6NTF7 200 aaKnown RBP6.83□□□□□ -1.32
TNFSF4-201ENST00000281834 CCDC84Q86UT8 332 aaPredicted RBP6.83□□□□□ -1.32
TNFSF4-201ENST00000281834 PCMTD1Q96MG8 357 aaPredicted RBP6.83□□□□□ -1.32
TNFSF4-201ENST00000281834 POLD4Q9HCU8 107 aa6.83□□□□□ -1.32
TNFSF4-201ENST00000281834 DNAI1Q9UI46 699 aa6.83□□□□□ -1.32
TNFSF4-201ENST00000281834 RGL2O15211 777 aa6.82□□□□□ -1.32
TNFSF4-201ENST00000281834 TTLL1O95922 423 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms