RNA–Protein interactions for RNA: ENST00000277537.10

SEC16A-201, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 3,910 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-201ENST00000277537 KIF18AQ8NI77 898 aa10.14□□□□□ -0.79
SEC16A-201ENST00000277537 CACTINQ8WUQ7 758 aaKnown RBP10.14□□□□□ -0.79
SEC16A-201ENST00000277537 RTFDC1Q9BY42 306 aaPredicted RBP10.14□□□□□ -0.79
SEC16A-201ENST00000277537 HOMER2Q9NSB8 354 aa10.14□□□□□ -0.79
SEC16A-201ENST00000277537 SYNRGQ9UMZ2 1314 aa10.14□□□□□ -0.79
SEC16A-201ENST00000277537 VEGFAP15692 232 aaPredicted RBP10.14□□□□□ -0.79
SEC16A-201ENST00000277537 SEPT2Q15019 361 aa10.14□□□□□ -0.79
SEC16A-201ENST00000277537 CDC42EP5Q6NZY7 148 aa10.14□□□□□ -0.79
SEC16A-201ENST00000277537 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.14□□□□□ -0.79
SEC16A-201ENST00000277537 DEF6Q9H4E7 631 aa10.14□□□□□ -0.79
SEC16A-201ENST00000277537 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.14□□□□□ -0.79
SEC16A-201ENST00000277537 MAN1B1Q9UKM7 699 aa10.14□□□□□ -0.79
SEC16A-201ENST00000277537 V9GYY5 206 aaPredicted RBP10.14□□□□□ -0.79
SEC16A-201ENST00000277537 PKD1L3Q7Z443 1732 aa10.13□□□□□ -0.79
SEC16A-201ENST00000277537 GH2P01242 217 aa10.13□□□□□ -0.79
SEC16A-201ENST00000277537 OR52Z1P0C646 297 aa10.13□□□□□ -0.79
SEC16A-201ENST00000277537 CC2D2BQ6DHV5 1058 aa10.13□□□□□ -0.79
SEC16A-201ENST00000277537 TTBK2Q6IQ55 1244 aa10.13□□□□□ -0.79
SEC16A-201ENST00000277537 FBXL16Q8N461 479 aa10.13□□□□□ -0.79
SEC16A-201ENST00000277537 ENGASEQ8NFI3 743 aa10.13□□□□□ -0.79
SEC16A-201ENST00000277537 ZNF384Q8TF68 577 aa10.13□□□□□ -0.79
SEC16A-201ENST00000277537 TMEM260Q9NX78 707 aa10.13□□□□□ -0.79
SEC16A-201ENST00000277537 TBC1D7Q9P0N9 293 aa10.13□□□□□ -0.79
SEC16A-201ENST00000277537 TIGD1Q96MW7 591 aa10.13□□□□□ -0.79
SEC16A-201ENST00000277537 PHF20Q9BVI0 1012 aa10.13□□□□□ -0.79
SEC16A-201ENST00000277537 ARHGEF10LQ9HCE6 1279 aa10.13□□□□□ -0.79
SEC16A-201ENST00000277537 CCP110O43303 1012 aa10.13□□□□□ -0.79
SEC16A-201ENST00000277537 SLFN14P0C7P3 912 aa10.13□□□□□ -0.79
SEC16A-201ENST00000277537 TOB1P50616 345 aaPredicted RBP10.13□□□□□ -0.79
SEC16A-201ENST00000277537 RCAN1P53805 252 aa10.13□□□□□ -0.79
SEC16A-201ENST00000277537 ADKP55263 362 aaKnown RBP10.13□□□□□ -0.79
SEC16A-201ENST00000277537 UBXN1Q04323 297 aa10.13□□□□□ -0.79
SEC16A-201ENST00000277537 GRM4Q14833 912 aa10.13□□□□□ -0.79
SEC16A-201ENST00000277537 SV2BQ7L1I2 683 aa10.13□□□□□ -0.79
SEC16A-201ENST00000277537 TAB2Q9NYJ8 693 aa10.13□□□□□ -0.79
SEC16A-201ENST00000277537 SWAP70Q9UH65 585 aa10.13□□□□□ -0.79
SEC16A-201ENST00000277537 TRIM21P19474 475 aaKnown RBP10.12□□□□□ -0.79
SEC16A-201ENST00000277537 PPP4CP60510 307 aa10.12□□□□□ -0.79
SEC16A-201ENST00000277537 SLC15A2Q16348 729 aa10.12□□□□□ -0.79
SEC16A-201ENST00000277537 CCDC93Q567U6 631 aa10.12□□□□□ -0.79
SEC16A-201ENST00000277537 EARS2Q5JPH6 523 aaKnown RBP10.12□□□□□ -0.79
SEC16A-201ENST00000277537 ZNF771Q7L3S4 317 aaPredicted RBP10.12□□□□□ -0.79
SEC16A-201ENST00000277537 CCDC17Q96LX7 622 aa10.12□□□□□ -0.79
SEC16A-201ENST00000277537 IL17RBQ9NRM6 502 aa10.12□□□□□ -0.79
SEC16A-201ENST00000277537 FBXO2Q9UK22 296 aaPredicted RBP10.12□□□□□ -0.79
SEC16A-201ENST00000277537 ZBTB21Q9ULJ3 1066 aa10.12□□□□□ -0.79
SEC16A-201ENST00000277537 CNTNAP5Q8WYK1 1306 aa10.12□□□□□ -0.79
SEC16A-201ENST00000277537 USP17L10C9JJH3 530 aa10.12□□□□□ -0.79
SEC16A-201ENST00000277537 UBXN2AP68543 259 aa10.12□□□□□ -0.79
SEC16A-201ENST00000277537 TTLL12Q14166 644 aaPredicted RBP10.12□□□□□ -0.79
SEC16A-201ENST00000277537 CCDC40Q4G0X9 1142 aa10.12□□□□□ -0.79
SEC16A-201ENST00000277537 ASPRV1Q53RT3 343 aa10.12□□□□□ -0.79
SEC16A-201ENST00000277537 METTL16Q86W50 562 aaKnown RBP10.12□□□□□ -0.79
SEC16A-201ENST00000277537 ZFP91Q96JP5 570 aaPredicted RBP10.12□□□□□ -0.79
SEC16A-201ENST00000277537 KANSL2Q9H9L4 492 aa10.12□□□□□ -0.79
SEC16A-201ENST00000277537 SAMSN1Q9NSI8 373 aaKnown RBP10.12□□□□□ -0.79
SEC16A-201ENST00000277537 DNAI1Q9UI46 699 aa10.12□□□□□ -0.79
SEC16A-201ENST00000277537 ZSCAN12O43309 604 aa10.12□□□□□ -0.79
SEC16A-201ENST00000277537 EEF2P13639 858 aaKnown RBP10.12□□□□□ -0.79
SEC16A-201ENST00000277537 GNG11P61952 73 aa10.12□□□□□ -0.79
SEC16A-201ENST00000277537 PDE4CQ08493 712 aa10.12□□□□□ -0.79
SEC16A-201ENST00000277537 PAK1Q13153 545 aa10.12□□□□□ -0.79
SEC16A-201ENST00000277537 PRR16Q569H4 304 aa10.12□□□□□ -0.79
SEC16A-201ENST00000277537 FKBP15Q5T1M5 1219 aa10.12□□□□□ -0.79
SEC16A-201ENST00000277537 WDR78Q5VTH9 848 aa10.12□□□□□ -0.79
SEC16A-201ENST00000277537 TCERG1LQ5VWI1 586 aa10.12□□□□□ -0.79
SEC16A-201ENST00000277537 NELFBQ8WX92 580 aa10.12□□□□□ -0.79
SEC16A-201ENST00000277537 PAGE5Q96GU1 130 aa10.12□□□□□ -0.79
SEC16A-201ENST00000277537 USP17L15C9J2P7 530 aa10.11□□□□□ -0.79
SEC16A-201ENST00000277537 USP17L13C9JLJ4 530 aa10.11□□□□□ -0.79
SEC16A-201ENST00000277537 USP17L11C9JVI0 530 aa10.11□□□□□ -0.79
SEC16A-201ENST00000277537 USP17L18D6R9N7 530 aa10.11□□□□□ -0.79
SEC16A-201ENST00000277537 USP17L22D6RA61 530 aa10.11□□□□□ -0.79
SEC16A-201ENST00000277537 USP17L17D6RBQ6 530 aa10.11□□□□□ -0.79
SEC16A-201ENST00000277537 USP17L19D6RCP7 530 aa10.11□□□□□ -0.79
SEC16A-201ENST00000277537 USP17L20D6RJB6 530 aa10.11□□□□□ -0.79
SEC16A-201ENST00000277537 TRAPPC10P48553 1259 aa10.11□□□□□ -0.79
SEC16A-201ENST00000277537 USP17L24Q0WX57 530 aa10.11□□□□□ -0.79
SEC16A-201ENST00000277537 PTPAQ15257 358 aa10.11□□□□□ -0.79
SEC16A-201ENST00000277537 NCAPH2Q6IBW4 605 aa10.11□□□□□ -0.79
SEC16A-201ENST00000277537 USP17L6PQ6QN14 398 aa10.11□□□□□ -0.79
SEC16A-201ENST00000277537 LRRC8AQ8IWT6 810 aa10.11□□□□□ -0.79
SEC16A-201ENST00000277537 IGSF22Q8N9C0 903 aa10.11□□□□□ -0.79
SEC16A-201ENST00000277537 MRFAP1L1Q96HT8 127 aa10.11□□□□□ -0.79
SEC16A-201ENST00000277537 TSG101Q99816 390 aa10.11□□□□□ -0.79
SEC16A-201ENST00000277537 OSBPL5Q9H0X9 879 aaPredicted RBP10.11□□□□□ -0.79
SEC16A-201ENST00000277537 MTMR4Q9NYA4 1195 aa10.11□□□□□ -0.79
SEC16A-201ENST00000277537 AP5Z1O43299 807 aa10.11□□□□□ -0.79
SEC16A-201ENST00000277537 ZNF500O60304 480 aaPredicted RBP10.11□□□□□ -0.79
SEC16A-201ENST00000277537 PKN1Q16512 942 aa10.11□□□□□ -0.79
SEC16A-201ENST00000277537 GPATCH4Q5T3I0 446 aaKnown RBP10.11□□□□□ -0.79
SEC16A-201ENST00000277537 C16orf86Q6ZW13 317 aa10.11□□□□□ -0.79
SEC16A-201ENST00000277537 FUCA2Q9BTY2 467 aa10.11□□□□□ -0.79
SEC16A-201ENST00000277537 DHX36Q9H2U1 1008 aaKnown RBP10.11□□□□□ -0.79
SEC16A-201ENST00000277537 ZSWIM4Q9H7M6 989 aa10.11□□□□□ -0.79
SEC16A-201ENST00000277537 PCDHA12Q9UN75 941 aa10.11□□□□□ -0.79
SEC16A-201ENST00000277537 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.11□□□□□ -0.79
SEC16A-201ENST00000277537 PLS1Q14651 629 aa10.11□□□□□ -0.79
SEC16A-201ENST00000277537 CCDC144BQ3MJ40 725 aa10.11□□□□□ -0.79
SEC16A-201ENST00000277537 CSGALNACT2Q8N6G5 542 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms