RNA–Protein interactions for RNA: ENST00000273156.11

SEC22C-202, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene SEC22C, Length 1,608 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-202ENST00000273156 ERVK-24P63145 666 aa20.75■□□□□ 0.91
SEC22C-202ENST00000273156 MTFR1Q15390 333 aa20.75■□□□□ 0.91
SEC22C-202ENST00000273156 LBX2Q6XYB7 198 aa20.75■□□□□ 0.91
SEC22C-202ENST00000273156 SLC44A5Q8NCS7 719 aa20.75■□□□□ 0.91
SEC22C-202ENST00000273156 UBAC1Q9BSL1 405 aa20.75■□□□□ 0.91
SEC22C-202ENST00000273156 DHX16O60231 1041 aaKnown RBP20.75■□□□□ 0.91
SEC22C-202ENST00000273156 RANBP6O60518 1105 aaKnown RBP20.75■□□□□ 0.91
SEC22C-202ENST00000273156 GJA8P48165 433 aa20.75■□□□□ 0.91
SEC22C-202ENST00000273156 SCRN1Q12765 414 aa20.75■□□□□ 0.91
SEC22C-202ENST00000273156 NFXL1Q6ZNB6 911 aa20.75■□□□□ 0.91
SEC22C-202ENST00000273156 SGMS1Q86VZ5 419 aa20.75■□□□□ 0.91
SEC22C-202ENST00000273156 TNPO1Q92973 898 aaKnown RBP20.75■□□□□ 0.91
SEC22C-202ENST00000273156 RPAP3Q9H6T3 665 aaPredicted RBP20.75■□□□□ 0.91
SEC22C-202ENST00000273156 KANSL2Q9H9L4 492 aa20.75■□□□□ 0.91
SEC22C-202ENST00000273156 TXNRD2Q9NNW7 524 aa20.75■□□□□ 0.91
SEC22C-202ENST00000273156 HOXC10Q9NYD6 342 aa20.75■□□□□ 0.91
SEC22C-202ENST00000273156 GJD2Q9UKL4 321 aa20.75■□□□□ 0.91
SEC22C-202ENST00000273156 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.75■□□□□ 0.91
SEC22C-202ENST00000273156 NAV1Q8NEY1 1877 aa20.74■□□□□ 0.91
SEC22C-202ENST00000273156 RBBP6Q7Z6E9 1792 aaKnown RBP20.74■□□□□ 0.91
SEC22C-202ENST00000273156 INHAP05111 366 aa20.74■□□□□ 0.91
SEC22C-202ENST00000273156 ELNP15502 786 aa20.74■□□□□ 0.91
SEC22C-202ENST00000273156 EVX2Q03828 476 aa20.74■□□□□ 0.91
SEC22C-202ENST00000273156 ICA1Q05084 483 aa20.74■□□□□ 0.91
SEC22C-202ENST00000273156 SYNE3Q6ZMZ3 975 aa20.74■□□□□ 0.91
SEC22C-202ENST00000273156 IQCA1Q86XH1 822 aa20.74■□□□□ 0.91
SEC22C-202ENST00000273156 TRMT44Q8IYL2 757 aaKnown RBP20.74■□□□□ 0.91
SEC22C-202ENST00000273156 NUDT12Q9BQG2 462 aa20.74■□□□□ 0.91
SEC22C-202ENST00000273156 PAGR1Q9BTK6 254 aa20.74■□□□□ 0.91
SEC22C-202ENST00000273156 BRPF3Q9ULD4 1205 aa20.74■□□□□ 0.91
SEC22C-202ENST00000273156 ZSWIM8A7E2V4 1837 aa20.74■□□□□ 0.91
SEC22C-202ENST00000273156 CCDC69A6NI79 296 aa20.73■□□□□ 0.91
SEC22C-202ENST00000273156 SMIM22K7EJ46 135 aa20.73■□□□□ 0.91
SEC22C-202ENST00000273156 XRCC5P13010 732 aaKnown RBP20.73■□□□□ 0.91
SEC22C-202ENST00000273156 AKR1B1P15121 316 aa20.73■□□□□ 0.91
SEC22C-202ENST00000273156 PDCP20941 246 aa20.73■□□□□ 0.91
SEC22C-202ENST00000273156 WTAPQ15007 396 aa20.73■□□□□ 0.91
SEC22C-202ENST00000273156 GBP4Q96PP9 640 aa20.73■□□□□ 0.91
SEC22C-202ENST00000273156 LY9Q9HBG7 655 aa20.73■□□□□ 0.91
SEC22C-202ENST00000273156 TMX2Q9Y320 296 aa20.73■□□□□ 0.91
SEC22C-202ENST00000273156 GOLGA8BA8MQT2 603 aa20.72■□□□□ 0.91
SEC22C-202ENST00000273156 PRDM1O75626 825 aa20.72■□□□□ 0.91
SEC22C-202ENST00000273156 HMGCRP04035 888 aa20.72■□□□□ 0.91
SEC22C-202ENST00000273156 CCT2P78371 535 aaKnown RBP20.72■□□□□ 0.91
SEC22C-202ENST00000273156 COG2Q14746 738 aa20.72■□□□□ 0.91
SEC22C-202ENST00000273156 MKNK2Q9HBH9 465 aa20.72■□□□□ 0.91
SEC22C-202ENST00000273156 ROBO3Q96MS0 1386 aa20.72■□□□□ 0.91
SEC22C-202ENST00000273156 A0A1W2PRG0 241 aa20.71■□□□□ 0.91
SEC22C-202ENST00000273156 BRD1O95696 1058 aa20.71■□□□□ 0.91
SEC22C-202ENST00000273156 HMGN5P82970 282 aaKnown RBP20.71■□□□□ 0.91
SEC22C-202ENST00000273156 ZSCAN10Q96SZ4 725 aaPredicted RBP20.71■□□□□ 0.91
SEC22C-202ENST00000273156 ZKSCAN3Q9BRR0 538 aa20.71■□□□□ 0.91
SEC22C-202ENST00000273156 KIF3AQ9Y496 699 aa20.71■□□□□ 0.91
SEC22C-202ENST00000273156 SLC12A7Q9Y666 1083 aa20.71■□□□□ 0.91
SEC22C-202ENST00000273156 PKP1Q13835 747 aa20.71■□□□□ 0.91
SEC22C-202ENST00000273156 NBR1Q14596 966 aa20.71■□□□□ 0.91
SEC22C-202ENST00000273156 PLEKHH3Q7Z736 793 aa20.71■□□□□ 0.91
SEC22C-202ENST00000273156 ZNF444Q8N0Y2 327 aaPredicted RBP20.71■□□□□ 0.91
SEC22C-202ENST00000273156 MB21D1Q8N884 522 aa20.71■□□□□ 0.91
SEC22C-202ENST00000273156 TANGO6Q9C0B7 1094 aa20.71■□□□□ 0.91
SEC22C-202ENST00000273156 UNC93B1Q9H1C4 597 aa20.71■□□□□ 0.91
SEC22C-202ENST00000273156 VCPKMTQ9H867 229 aa20.71■□□□□ 0.91
SEC22C-202ENST00000273156 TSPY2A6NKD2 308 aa20.7■□□□□ 0.9
SEC22C-202ENST00000273156 ZBTB43O43298 467 aa20.7■□□□□ 0.9
SEC22C-202ENST00000273156 STX6O43752 255 aa20.7■□□□□ 0.9
SEC22C-202ENST00000273156 SYT1P21579 422 aa20.7■□□□□ 0.9
SEC22C-202ENST00000273156 Q3C1V9 767 aa20.7■□□□□ 0.9
SEC22C-202ENST00000273156 LARP1BQ659C4 914 aaKnown RBP20.7■□□□□ 0.9
SEC22C-202ENST00000273156 APOA5Q6Q788 366 aa20.7■□□□□ 0.9
SEC22C-202ENST00000273156 GPR142Q7Z601 462 aa20.7■□□□□ 0.9
SEC22C-202ENST00000273156 SMARCC2Q8TAQ2 1214 aa20.7■□□□□ 0.9
SEC22C-202ENST00000273156 U2AF1L4Q8WU68 220 aaKnown RBP20.7■□□□□ 0.9
SEC22C-202ENST00000273156 BRCA2P51587 3418 aa20.69■□□□□ 0.9
SEC22C-202ENST00000273156 SPDYE16A6NNV3 312 aaPredicted RBP20.69■□□□□ 0.9
SEC22C-202ENST00000273156 CPLX1O14810 134 aa20.69■□□□□ 0.9
SEC22C-202ENST00000273156 SGPL1O95470 568 aa20.69■□□□□ 0.9
SEC22C-202ENST00000273156 RGS2P41220 211 aa20.69■□□□□ 0.9
SEC22C-202ENST00000273156 METAP2P50579 478 aaKnown RBP eCLIP20.69■□□□□ 0.9
SEC22C-202ENST00000273156 CCDC178Q5BJE1 867 aa20.69■□□□□ 0.9
SEC22C-202ENST00000273156 CPLX2Q6PUV4 134 aaKnown RBP20.69■□□□□ 0.9
SEC22C-202ENST00000273156 FAM184AQ8NB25 1140 aa20.69■□□□□ 0.9
SEC22C-202ENST00000273156 NCOA5Q9HCD5 579 aaKnown RBP20.69■□□□□ 0.9
SEC22C-202ENST00000273156 GOPCQ9HD26 462 aa20.69■□□□□ 0.9
SEC22C-202ENST00000273156 ZDHHC9Q9Y397 364 aa20.69■□□□□ 0.9
SEC22C-202ENST00000273156 TNKSO95271 1327 aa20.69■□□□□ 0.9
SEC22C-202ENST00000273156 MGAMO43451 1857 aa20.69■□□□□ 0.9
SEC22C-202ENST00000273156 WDR46O15213 610 aaKnown RBP20.68■□□□□ 0.9
SEC22C-202ENST00000273156 CLEC17AQ6ZS10 378 aa20.68■□□□□ 0.9
SEC22C-202ENST00000273156 SIAH1Q8IUQ4 282 aa20.68■□□□□ 0.9
SEC22C-202ENST00000273156 NSUN7Q8NE18 718 aaKnown RBP20.68■□□□□ 0.9
SEC22C-202ENST00000273156 PORCNQ9H237 461 aa20.68■□□□□ 0.9
SEC22C-202ENST00000273156 PAK6Q9NQU5 681 aaPredicted RBP20.68■□□□□ 0.9
SEC22C-202ENST00000273156 IVNS1ABPQ9Y6Y0 642 aa20.68■□□□□ 0.9
SEC22C-202ENST00000273156 EEF2P13639 858 aaKnown RBP20.67■□□□□ 0.9
SEC22C-202ENST00000273156 CYP2B6P20813 491 aa20.67■□□□□ 0.9
SEC22C-202ENST00000273156 RCAN1P53805 252 aa20.67■□□□□ 0.9
SEC22C-202ENST00000273156 ATP2B2Q01814 1243 aa20.67■□□□□ 0.9
SEC22C-202ENST00000273156 SEC23AQ15436 765 aa20.67■□□□□ 0.9
SEC22C-202ENST00000273156 IFIT1BQ5T764 474 aaKnown RBP20.67■□□□□ 0.9
SEC22C-202ENST00000273156 SHISA4Q96DD7 197 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms