RNA–Protein interactions for RNA: ENST00000272638.13

UBXN4-201, Transcript of UBX domain protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN4, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-201ENST00000272638 XRN1Q8IZH2 1706 aaKnown RBP14.08□□□□□ -0.16
UBXN4-201ENST00000272638 B4DLN1 442 aa14.08□□□□□ -0.16
UBXN4-201ENST00000272638 CALCRLQ16602 461 aa14.08□□□□□ -0.16
UBXN4-201ENST00000272638 SV2BQ7L1I2 683 aa14.08□□□□□ -0.16
UBXN4-201ENST00000272638 TBCKQ8TEA7 893 aa14.08□□□□□ -0.16
UBXN4-201ENST00000272638 GJA10Q969M2 543 aa14.08□□□□□ -0.16
UBXN4-201ENST00000272638 TMEM260Q9NX78 707 aa14.08□□□□□ -0.16
UBXN4-201ENST00000272638 PNPLA7Q6ZV29 1317 aa14.08□□□□□ -0.16
UBXN4-201ENST00000272638 MED1Q15648 1581 aaPredicted RBP14.08□□□□□ -0.16
UBXN4-201ENST00000272638 LMAN1P49257 510 aa14.07□□□□□ -0.16
UBXN4-201ENST00000272638 ENOX1Q8TC92 643 aaKnown RBP14.07□□□□□ -0.16
UBXN4-201ENST00000272638 OGFRQ9NZT2 677 aa14.07□□□□□ -0.16
UBXN4-201ENST00000272638 XDHP47989 1333 aa14.07□□□□□ -0.16
UBXN4-201ENST00000272638 RIC1Q4ADV7 1423 aa14.07□□□□□ -0.16
UBXN4-201ENST00000272638 KDM4FA0A1W2PPD8 638 aa14.07□□□□□ -0.16
UBXN4-201ENST00000272638 PLCG2P16885 1265 aa14.07□□□□□ -0.16
UBXN4-201ENST00000272638 SLC1A4P43007 532 aa14.07□□□□□ -0.16
UBXN4-201ENST00000272638 CDK8P49336 464 aa14.07□□□□□ -0.16
UBXN4-201ENST00000272638 MRPS25P82663 173 aaKnown RBP14.07□□□□□ -0.16
UBXN4-201ENST00000272638 TAF3Q5VWG9 929 aa14.07□□□□□ -0.16
UBXN4-201ENST00000272638 GOLGA1Q92805 767 aa14.07□□□□□ -0.16
UBXN4-201ENST00000272638 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.07□□□□□ -0.164e-8■■■■■ 32.6
UBXN4-201ENST00000272638 MAEAQ7L5Y9 396 aa14.07□□□□□ -0.16
UBXN4-201ENST00000272638 MAP3K14Q99558 947 aa14.07□□□□□ -0.16
UBXN4-201ENST00000272638 TACC3Q9Y6A5 838 aa14.07□□□□□ -0.16
UBXN4-201ENST00000272638 USP17L5A8MUK1 530 aa14.06□□□□□ -0.16
UBXN4-201ENST00000272638 NOP2P46087 812 aaKnown RBP14.06□□□□□ -0.16
UBXN4-201ENST00000272638 COPB1P53618 953 aaKnown RBP14.06□□□□□ -0.16
UBXN4-201ENST00000272638 TROAPQ12815 778 aa14.06□□□□□ -0.16
UBXN4-201ENST00000272638 PYM1Q9BRP8 204 aaKnown RBP14.06□□□□□ -0.16
UBXN4-201ENST00000272638 RIOK1Q9BRS2 568 aaKnown RBP14.06□□□□□ -0.16
UBXN4-201ENST00000272638 TMOD2Q9NZR1 351 aa14.06□□□□□ -0.16
UBXN4-201ENST00000272638 PCDHA4Q9UN74 947 aa14.06□□□□□ -0.16
UBXN4-201ENST00000272638 CHMP4BP1P59074 171 aa14.06□□□□□ -0.16
UBXN4-201ENST00000272638 WDR24Q96S15 920 aa14.06□□□□□ -0.16
UBXN4-201ENST00000272638 ZBTB21Q9ULJ3 1066 aa14.06□□□□□ -0.16
UBXN4-201ENST00000272638 WDR19Q8NEZ3 1342 aa14.06□□□□□ -0.16
UBXN4-201ENST00000272638 BCL9O00512 1426 aa14.06□□□□□ -0.16
UBXN4-201ENST00000272638 GTPBP6O43824 516 aaPredicted RBP14.06□□□□□ -0.16
UBXN4-201ENST00000272638 KRT31Q15323 416 aa14.06□□□□□ -0.16
UBXN4-201ENST00000272638 CEP95Q96GE4 821 aa14.06□□□□□ -0.16
UBXN4-201ENST00000272638 FEZ1Q99689 392 aa14.06□□□□□ -0.16
UBXN4-201ENST00000272638 OSBPL5Q9H0X9 879 aaPredicted RBP14.06□□□□□ -0.16
UBXN4-201ENST00000272638 ST7Q9NRC1 585 aa14.06□□□□□ -0.16
UBXN4-201ENST00000272638 PSDA5PKW4 1024 aaPredicted RBP14.06□□□□□ -0.16
UBXN4-201ENST00000272638 ZMYND10O75800 440 aa14.06□□□□□ -0.16
UBXN4-201ENST00000272638 OR52Z1P0C646 297 aa14.06□□□□□ -0.16
UBXN4-201ENST00000272638 SLURP2P0DP57 97 aa14.06□□□□□ -0.16
UBXN4-201ENST00000272638 PLCG1P19174 1290 aa14.06□□□□□ -0.16
UBXN4-201ENST00000272638 ADCY7P51828 1080 aa14.06□□□□□ -0.16
UBXN4-201ENST00000272638 CYP27A1Q02318 531 aa14.06□□□□□ -0.16
UBXN4-201ENST00000272638 NCAPHQ15003 741 aa14.06□□□□□ -0.16
UBXN4-201ENST00000272638 TYW1BQ6NUM6 668 aa14.06□□□□□ -0.16
UBXN4-201ENST00000272638 AEBP2Q6ZN18 517 aaPredicted RBP14.06□□□□□ -0.16
UBXN4-201ENST00000272638 SLC35F6Q8N357 371 aa14.06□□□□□ -0.16
UBXN4-201ENST00000272638 ZNF512BQ96KM6 892 aaPredicted RBP14.06□□□□□ -0.16
UBXN4-201ENST00000272638 GSDMAQ96QA5 445 aa14.06□□□□□ -0.16
UBXN4-201ENST00000272638 CD209Q9NNX6 404 aa14.06□□□□□ -0.16
UBXN4-201ENST00000272638 STK36Q9NRP7 1315 aa14.05□□□□□ -0.16
UBXN4-201ENST00000272638 GPSM2P81274 684 aa14.05□□□□□ -0.16
UBXN4-201ENST00000272638 GRAPQ13588 217 aa14.05□□□□□ -0.16
UBXN4-201ENST00000272638 HERC4Q5GLZ8 1057 aaPredicted RBP14.05□□□□□ -0.16
UBXN4-201ENST00000272638 NEK8Q86SG6 692 aa14.05□□□□□ -0.16
UBXN4-201ENST00000272638 GRAPLQ8TC17 118 aaPredicted RBP14.05□□□□□ -0.16
UBXN4-201ENST00000272638 KANSL2Q9H9L4 492 aa14.05□□□□□ -0.16
UBXN4-201ENST00000272638 WNT7AO00755 349 aa14.05□□□□□ -0.16
UBXN4-201ENST00000272638 GDF11O95390 407 aa14.05□□□□□ -0.16
UBXN4-201ENST00000272638 CYP4A11Q02928 519 aa14.05□□□□□ -0.16
UBXN4-201ENST00000272638 SYCP1Q15431 976 aa14.05□□□□□ -0.16
UBXN4-201ENST00000272638 GRIK5Q16478 980 aa14.05□□□□□ -0.16
UBXN4-201ENST00000272638 SEPT12Q8IYM1 358 aa14.05□□□□□ -0.16
UBXN4-201ENST00000272638 FNBP4Q8N3X1 1017 aaPredicted RBP14.05□□□□□ -0.16
UBXN4-201ENST00000272638 RABEP2Q9H5N1 569 aa14.05□□□□□ -0.16
UBXN4-201ENST00000272638 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.05□□□□□ -0.16
UBXN4-201ENST00000272638 SAMM50Q9Y512 469 aa14.05□□□□□ -0.16
UBXN4-201ENST00000272638 CYLC1P35663 651 aaPredicted RBP14.05□□□□□ -0.16
UBXN4-201ENST00000272638 USP8P40818 1118 aa14.05□□□□□ -0.16
UBXN4-201ENST00000272638 UBXN2AP68543 259 aa14.05□□□□□ -0.16
UBXN4-201ENST00000272638 KMT5BQ4FZB7 885 aa14.05□□□□□ -0.16
UBXN4-201ENST00000272638 LRRN4CLQ8ND94 238 aa14.05□□□□□ -0.16
UBXN4-201ENST00000272638 TUBE1Q9UJT0 475 aa14.05□□□□□ -0.16
UBXN4-201ENST00000272638 TFR2Q9UP52 801 aa14.05□□□□□ -0.16
UBXN4-201ENST00000272638 POTEMA6NI47 508 aa14.04□□□□□ -0.16
UBXN4-201ENST00000272638 USO1O60763 962 aaKnown RBP14.04□□□□□ -0.16
UBXN4-201ENST00000272638 PRCPP42785 496 aa14.04□□□□□ -0.16
UBXN4-201ENST00000272638 KIF5AQ12840 1032 aa14.04□□□□□ -0.16
UBXN4-201ENST00000272638 SF3B3Q15393 1217 aaKnown RBP14.04□□□□□ -0.16
UBXN4-201ENST00000272638 PFKFB3Q16875 520 aaPredicted RBP14.04□□□□□ -0.16
UBXN4-201ENST00000272638 DCAF17Q5H9S7 520 aaPredicted RBP14.04□□□□□ -0.16
UBXN4-201ENST00000272638 KRT25Q7Z3Z0 450 aa14.04□□□□□ -0.16
UBXN4-201ENST00000272638 TMEM60Q9H2L4 133 aa14.04□□□□□ -0.16
UBXN4-201ENST00000272638 STX10O60499 249 aa14.04□□□□□ -0.16
UBXN4-201ENST00000272638 NCAPH2Q6IBW4 605 aa14.04□□□□□ -0.16
UBXN4-201ENST00000272638 C2CD5Q86YS7 1000 aa14.04□□□□□ -0.16
UBXN4-201ENST00000272638 TRIML1Q8N9V2 468 aa14.04□□□□□ -0.16
UBXN4-201ENST00000272638 SPAG5Q96R06 1193 aa14.04□□□□□ -0.16
UBXN4-201ENST00000272638 DNAJC5Q9H3Z4 198 aa14.04□□□□□ -0.16
UBXN4-201ENST00000272638 CACNA1FO60840 1977 aa14.04□□□□□ -0.16
UBXN4-201ENST00000272638 DNAJC21Q5F1R6 531 aaKnown RBP14.04□□□□□ -0.16
UBXN4-201ENST00000272638 CD44P16070 742 aaKnown RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms