RNA–Protein interactions for RNA: ENST00000271971.6

CAPN9-201, Transcript of calpain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN9, Length 2,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-201ENST00000271971 LIG1P18858 919 aa14.38□□□□□ -0.11
CAPN9-201ENST00000271971 SLC1A4P43007 532 aa14.38□□□□□ -0.11
CAPN9-201ENST00000271971 TOB1P50616 345 aaPredicted RBP14.38□□□□□ -0.11
CAPN9-201ENST00000271971 STK38Q15208 465 aa14.38□□□□□ -0.11
CAPN9-201ENST00000271971 SF3A1Q15459 793 aaKnown RBP14.38□□□□□ -0.11
CAPN9-201ENST00000271971 ATL3Q6DD88 541 aa14.38□□□□□ -0.11
CAPN9-201ENST00000271971 SPICE1Q8N0Z3 855 aa14.38□□□□□ -0.11
CAPN9-201ENST00000271971 LINC00301Q8NCQ3 95 aa14.38□□□□□ -0.11
CAPN9-201ENST00000271971 RRP36Q96EU6 259 aaKnown RBP14.38□□□□□ -0.11
CAPN9-201ENST00000271971 GOLGA6L4A6NEF3 574 aa14.37□□□□□ -0.11
CAPN9-201ENST00000271971 F5H6K3 240 aa14.37□□□□□ -0.11
CAPN9-201ENST00000271971 ATP2B1P20020 1258 aa14.37□□□□□ -0.11
CAPN9-201ENST00000271971 CAP2P40123 477 aa14.37□□□□□ -0.11
CAPN9-201ENST00000271971 ME1P48163 572 aa14.37□□□□□ -0.11
CAPN9-201ENST00000271971 KLRC3Q07444 240 aa14.37□□□□□ -0.11
CAPN9-201ENST00000271971 GPR162Q16538 588 aa14.37□□□□□ -0.11
CAPN9-201ENST00000271971 BICD2Q8TD16 824 aa14.37□□□□□ -0.11
CAPN9-201ENST00000271971 GLIS2Q9BZE0 524 aaPredicted RBP14.37□□□□□ -0.11
CAPN9-201ENST00000271971 RIOX1Q9H6W3 641 aa14.37□□□□□ -0.11
CAPN9-201ENST00000271971 SEC63Q9UGP8 760 aaKnown RBP14.37□□□□□ -0.11
CAPN9-201ENST00000271971 PHF20L1A8MW92 1017 aa14.37□□□□□ -0.11
CAPN9-201ENST00000271971 DYNC1I1O14576 645 aa14.37□□□□□ -0.11
CAPN9-201ENST00000271971 ZYXQ15942 572 aaKnown RBP14.37□□□□□ -0.11
CAPN9-201ENST00000271971 ADGRF4Q8IZF3 695 aa14.37□□□□□ -0.11
CAPN9-201ENST00000271971 RASGRP4Q8TDF6 673 aa14.37□□□□□ -0.11
CAPN9-201ENST00000271971 TNFRSF25Q93038 417 aa14.37□□□□□ -0.11
CAPN9-201ENST00000271971 BARHL2Q9NY43 387 aa14.37□□□□□ -0.11
CAPN9-201ENST00000271971 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.37□□□□□ -0.11
CAPN9-201ENST00000271971 DOCK1Q14185 1865 aa14.36□□□□□ -0.11
CAPN9-201ENST00000271971 MAP3K10Q02779 954 aa14.36□□□□□ -0.11
CAPN9-201ENST00000271971 KIAA1755Q5JYT7 1200 aa14.36□□□□□ -0.11
CAPN9-201ENST00000271971 GPATCH4Q5T3I0 446 aaKnown RBP14.36□□□□□ -0.11
CAPN9-201ENST00000271971 JMJD4Q9H9V9 463 aa14.36□□□□□ -0.11
CAPN9-201ENST00000271971 BRMS1Q9HCU9 246 aa14.36□□□□□ -0.11
CAPN9-201ENST00000271971 ZKSCAN5Q9Y2L8 839 aa14.36□□□□□ -0.11
CAPN9-201ENST00000271971 USP17L10C9JJH3 530 aa14.36□□□□□ -0.11
CAPN9-201ENST00000271971 WNT7AO00755 349 aa14.36□□□□□ -0.11
CAPN9-201ENST00000271971 YEATS4O95619 227 aa14.36□□□□□ -0.11
CAPN9-201ENST00000271971 MARCKSP29966 332 aaPredicted RBP14.36□□□□□ -0.11
CAPN9-201ENST00000271971 NAPAP54920 295 aa14.36□□□□□ -0.11
CAPN9-201ENST00000271971 DLK2Q6UY11 383 aa14.36□□□□□ -0.11
CAPN9-201ENST00000271971 APOBEC3FQ8IUX4 373 aaKnown RBP14.36□□□□□ -0.11
CAPN9-201ENST00000271971 GMCL1P1Q8NEA9 526 aa14.36□□□□□ -0.11
CAPN9-201ENST00000271971 DCAF4Q8WV16 495 aa14.36□□□□□ -0.11
CAPN9-201ENST00000271971 PCDHA7Q9UN72 937 aa14.36□□□□□ -0.11
CAPN9-201ENST00000271971 SYCE3A1L190 88 aa14.35□□□□□ -0.11
CAPN9-201ENST00000271971 SPTLC2O15270 562 aa14.35□□□□□ -0.11
CAPN9-201ENST00000271971 SMARCA1P28370 1054 aa14.35□□□□□ -0.11
CAPN9-201ENST00000271971 LMOD1P29536 600 aaPredicted RBP14.35□□□□□ -0.11
CAPN9-201ENST00000271971 ARHGEF10LQ9HCE6 1279 aa14.35□□□□□ -0.11
CAPN9-201ENST00000271971 SH3GLB2Q9NR46 395 aa14.35□□□□□ -0.11
CAPN9-201ENST00000271971 FAM13BQ9NYF5 915 aa14.35□□□□□ -0.11
CAPN9-201ENST00000271971 R3HCC1Q9Y3T6 440 aaKnown RBP14.35□□□□□ -0.11
CAPN9-201ENST00000271971 PCDHB6Q9Y5E3 794 aa14.35□□□□□ -0.11
CAPN9-201ENST00000271971 SSC5DA1L4H1 1573 aa14.35□□□□□ -0.11
CAPN9-201ENST00000271971 SMCHD1A6NHR9 2005 aa14.35□□□□□ -0.11
CAPN9-201ENST00000271971 PPP1R11O60927 126 aaPredicted RBP14.34□□□□□ -0.11
CAPN9-201ENST00000271971 PTPAQ15257 358 aa14.34□□□□□ -0.11
CAPN9-201ENST00000271971 PIK3AP1Q6ZUJ8 805 aa14.34□□□□□ -0.11
CAPN9-201ENST00000271971 COA7Q96BR5 231 aa14.34□□□□□ -0.11
CAPN9-201ENST00000271971 RBSNQ9H1K0 784 aa14.34□□□□□ -0.11
CAPN9-201ENST00000271971 GOLPH3LQ9H4A5 285 aa14.34□□□□□ -0.11
CAPN9-201ENST00000271971 INPP5BP32019 993 aa14.34□□□□□ -0.11
CAPN9-201ENST00000271971 SNAP25P60880 206 aa14.34□□□□□ -0.11
CAPN9-201ENST00000271971 BLIDQ8IZY5 108 aa14.34□□□□□ -0.11
CAPN9-201ENST00000271971 CCDC148Q8NFR7 591 aa14.34□□□□□ -0.11
CAPN9-201ENST00000271971 KCNG4Q8TDN1 519 aa14.34□□□□□ -0.11
CAPN9-201ENST00000271971 CCDC39Q9UFE4 941 aa14.34□□□□□ -0.11
CAPN9-201ENST00000271971 PCDHA4Q9UN74 947 aa14.34□□□□□ -0.11
CAPN9-201ENST00000271971 NR1I2O75469 434 aa14.33□□□□□ -0.11
CAPN9-201ENST00000271971 ASNSP08243 561 aa14.33□□□□□ -0.11
CAPN9-201ENST00000271971 CALML3P27482 149 aa14.33□□□□□ -0.11
CAPN9-201ENST00000271971 IKQ13123 557 aaPredicted RBP14.33□□□□□ -0.11
CAPN9-201ENST00000271971 SLC39A14Q15043 492 aa14.33□□□□□ -0.11
CAPN9-201ENST00000271971 RILPL1Q5EBL4 403 aa14.33□□□□□ -0.11
CAPN9-201ENST00000271971 SMAP1Q8IYB5 467 aaPredicted RBP14.33□□□□□ -0.11
CAPN9-201ENST00000271971 GMCL1Q96IK5 515 aa14.33□□□□□ -0.11
CAPN9-201ENST00000271971 ADARB2Q9NS39 739 aaKnown RBP14.33□□□□□ -0.11
CAPN9-201ENST00000271971 DACT1Q9NYF0 836 aa14.33□□□□□ -0.11
CAPN9-201ENST00000271971 TMX2Q9Y320 296 aa14.33□□□□□ -0.11
CAPN9-201ENST00000271971 MRVI1Q9Y6F6 885 aa14.33□□□□□ -0.11
CAPN9-201ENST00000271971 BMP3P12645 472 aa14.33□□□□□ -0.12
CAPN9-201ENST00000271971 CCAR1Q8IX12 1150 aaKnown RBP14.33□□□□□ -0.12
CAPN9-201ENST00000271971 TMEM232C9JQI7 657 aa14.32□□□□□ -0.12
CAPN9-201ENST00000271971 DGKZQ13574 1117 aa14.32□□□□□ -0.12
CAPN9-201ENST00000271971 CCDC183Q5T5S1 534 aa14.32□□□□□ -0.12
CAPN9-201ENST00000271971 SYAP1Q96A49 352 aaPredicted RBP14.32□□□□□ -0.12
CAPN9-201ENST00000271971 ZNF341Q9BYN7 854 aa14.32□□□□□ -0.12
CAPN9-201ENST00000271971 PNMA6FA0A0J9YX94 578 aa14.32□□□□□ -0.12
CAPN9-201ENST00000271971 SMCO2A6NFE2 343 aa14.32□□□□□ -0.12
CAPN9-201ENST00000271971 M0R2N6 131 aa14.32□□□□□ -0.12
CAPN9-201ENST00000271971 TAL1P17542 331 aaPredicted RBP14.32□□□□□ -0.12
CAPN9-201ENST00000271971 FAM83BQ5T0W9 1011 aa14.32□□□□□ -0.12
CAPN9-201ENST00000271971 SASS6Q6UVJ0 657 aa14.32□□□□□ -0.12
CAPN9-201ENST00000271971 FSIP1Q8NA03 581 aa14.32□□□□□ -0.12
CAPN9-201ENST00000271971 CLIC6Q96NY7 704 aa14.32□□□□□ -0.12
CAPN9-201ENST00000271971 ZMYND12Q9H0C1 365 aa14.32□□□□□ -0.12
CAPN9-201ENST00000271971 GOPCQ9HD26 462 aa14.32□□□□□ -0.12
CAPN9-201ENST00000271971 PCDHA6Q9UN73 950 aa14.32□□□□□ -0.12
CAPN9-201ENST00000271971 PCDHA8Q9Y5H6 950 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms