RNA–Protein interactions for RNA: ENST00000271324.5

CD53-201, Transcript of CD53 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD53, Length 1,505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD53-201ENST00000271324 USP17L17D6RBQ6 530 aa7.72□□□□□ -1.17
CD53-201ENST00000271324 USP17L19D6RCP7 530 aa7.72□□□□□ -1.17
CD53-201ENST00000271324 USP17L20D6RJB6 530 aa7.72□□□□□ -1.17
CD53-201ENST00000271324 VCAM1P19320 739 aa7.72□□□□□ -1.17
CD53-201ENST00000271324 PTPREP23469 700 aa7.72□□□□□ -1.17
CD53-201ENST00000271324 GUCY1A2P33402 732 aa7.72□□□□□ -1.17
CD53-201ENST00000271324 PLCD1P51178 756 aa7.72□□□□□ -1.17
CD53-201ENST00000271324 GABPB1Q06547 395 aaPredicted RBP7.72□□□□□ -1.17
CD53-201ENST00000271324 USP17L24Q0WX57 530 aa7.72□□□□□ -1.17
CD53-201ENST00000271324 CCDC158Q5M9N0 1113 aa7.72□□□□□ -1.17
CD53-201ENST00000271324 MAGEB6Q8N7X4 407 aa7.72□□□□□ -1.17
CD53-201ENST00000271324 LNPKQ9C0E8 428 aa7.72□□□□□ -1.17
CD53-201ENST00000271324 DDX20Q9UHI6 824 aaKnown RBP7.72□□□□□ -1.17
CD53-201ENST00000271324 RABGAP1Q9Y3P9 1069 aa7.72□□□□□ -1.17
CD53-201ENST00000271324 ZNF236Q9UL36 1845 aa7.72□□□□□ -1.17
CD53-201ENST00000271324 CHD9Q3L8U1 2897 aa7.72□□□□□ -1.17
CD53-201ENST00000271324 A0A1W2PRG0 241 aa7.71□□□□□ -1.18
CD53-201ENST00000271324 SYCE3A1L190 88 aa7.71□□□□□ -1.18
CD53-201ENST00000271324 SLC15A5A6NIM6 579 aa7.71□□□□□ -1.18
CD53-201ENST00000271324 SPDYE16A6NNV3 312 aaPredicted RBP7.71□□□□□ -1.18
CD53-201ENST00000271324 PRPF40AO75400 957 aaKnown RBP7.71□□□□□ -1.18
CD53-201ENST00000271324 SURF6O75683 361 aaKnown RBP7.71□□□□□ -1.18
CD53-201ENST00000271324 IDH1O75874 414 aaKnown RBP7.71□□□□□ -1.18
CD53-201ENST00000271324 HLA-DOAP06340 250 aa7.71□□□□□ -1.18
CD53-201ENST00000271324 SHMT1P34896 483 aa7.71□□□□□ -1.18
CD53-201ENST00000271324 USP5P45974 858 aa7.71□□□□□ -1.18
CD53-201ENST00000271324 MCM2P49736 904 aa7.71□□□□□ -1.18
CD53-201ENST00000271324 RTP1P59025 263 aa7.71□□□□□ -1.18
CD53-201ENST00000271324 CBX1P83916 185 aa7.71□□□□□ -1.18
CD53-201ENST00000271324 ATP8B2P98198 1209 aa7.71□□□□□ -1.18
CD53-201ENST00000271324 ATP2B2Q01814 1243 aa7.71□□□□□ -1.18
CD53-201ENST00000271324 OS9Q13438 667 aaPredicted RBP7.71□□□□□ -1.18
CD53-201ENST00000271324 GRB14Q14449 540 aa7.71□□□□□ -1.18
CD53-201ENST00000271324 SEPT2Q15019 361 aa7.71□□□□□ -1.18
CD53-201ENST00000271324 SHHQ15465 462 aa7.71□□□□□ -1.18
CD53-201ENST00000271324 ABCB5Q2M3G0 1257 aa7.71□□□□□ -1.18
CD53-201ENST00000271324 CERKLQ49MI3 558 aaPredicted RBP7.71□□□□□ -1.18
CD53-201ENST00000271324 KIAA1755Q5JYT7 1200 aa7.71□□□□□ -1.18
CD53-201ENST00000271324 PRAMEF19Q5SWL8 479 aa7.71□□□□□ -1.18
CD53-201ENST00000271324 C9orf50Q5SZB4 431 aa7.71□□□□□ -1.18
CD53-201ENST00000271324 MFSD14CQ5VZR4 134 aa7.71□□□□□ -1.18
CD53-201ENST00000271324 ZNF771Q7L3S4 317 aaPredicted RBP7.71□□□□□ -1.18
CD53-201ENST00000271324 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.71□□□□□ -1.18
CD53-201ENST00000271324 SSH3Q8TE77 659 aa7.71□□□□□ -1.18
CD53-201ENST00000271324 EAF2Q96CJ1 260 aaPredicted RBP7.71□□□□□ -1.18
CD53-201ENST00000271324 C12orf42Q96LP6 360 aa7.71□□□□□ -1.18
CD53-201ENST00000271324 RPAP3Q9H6T3 665 aaPredicted RBP7.71□□□□□ -1.18
CD53-201ENST00000271324 GPR108Q9NPR9 543 aa7.71□□□□□ -1.18
CD53-201ENST00000271324 ATP11BQ9Y2G3 1177 aa7.71□□□□□ -1.18
CD53-201ENST00000271324 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.71□□□□□ -1.182e-8■■■□□ 16.2
CD53-201ENST00000271324 MYH7P12883 1935 aa7.71□□□□□ -1.18
CD53-201ENST00000271324 MCM3APO60318 1980 aa7.71□□□□□ -1.18
CD53-201ENST00000271324 XIRP2A4UGR9 3374 aa7.7□□□□□ -1.18
CD53-201ENST00000271324 SMIM22K7EJ46 135 aa7.7□□□□□ -1.18
CD53-201ENST00000271324 SNPHO15079 494 aa7.7□□□□□ -1.18
CD53-201ENST00000271324 IGHA2P01877 340 aa7.7□□□□□ -1.18
CD53-201ENST00000271324 SLC39A5Q6ZMH5 540 aa7.7□□□□□ -1.18
CD53-201ENST00000271324 SH3RF1Q7Z6J0 888 aa7.7□□□□□ -1.18
CD53-201ENST00000271324 IPO4Q8TEX9 1081 aaKnown RBP7.7□□□□□ -1.18
CD53-201ENST00000271324 GTF3C2Q8WUA4 911 aaPredicted RBP7.7□□□□□ -1.18
CD53-201ENST00000271324 LPAR1Q92633 364 aa7.7□□□□□ -1.18
CD53-201ENST00000271324 FERMT2Q96AC1 680 aa7.7□□□□□ -1.18
CD53-201ENST00000271324 ZNF512BQ96KM6 892 aaPredicted RBP7.7□□□□□ -1.18
CD53-201ENST00000271324 KIF2CQ99661 725 aa7.7□□□□□ -1.18
CD53-201ENST00000271324 LBHD1Q9BQE6 289 aaPredicted RBP7.7□□□□□ -1.18
CD53-201ENST00000271324 KIAA1683Q9H0B3 1180 aa7.7□□□□□ -1.18
CD53-201ENST00000271324 GINM1Q9NU53 330 aa7.7□□□□□ -1.18
CD53-201ENST00000271324 ZBTB40Q9NUA8 1239 aa7.7□□□□□ -1.18
CD53-201ENST00000271324 SERPINB13Q9UIV8 391 aa7.7□□□□□ -1.18
CD53-201ENST00000271324 GBF1Q92538 1859 aa7.7□□□□□ -1.18
CD53-201ENST00000271324 MYO9BQ13459 2157 aa7.69□□□□□ -1.18
CD53-201ENST00000271324 DNM1LO00429 736 aa7.69□□□□□ -1.18
CD53-201ENST00000271324 COBLO75128 1261 aa7.69□□□□□ -1.18
CD53-201ENST00000271324 GLRX3O76003 335 aaKnown RBP7.69□□□□□ -1.18
CD53-201ENST00000271324 REC8O95072 547 aa7.69□□□□□ -1.18
CD53-201ENST00000271324 HOXC6P09630 235 aa7.69□□□□□ -1.18
CD53-201ENST00000271324 CYP2D6P10635 497 aa7.69□□□□□ -1.18
CD53-201ENST00000271324 CYBAP13498 195 aa7.69□□□□□ -1.18
CD53-201ENST00000271324 ITGB8P26012 769 aa7.69□□□□□ -1.18
CD53-201ENST00000271324 ADORA2AP29274 412 aa7.69□□□□□ -1.18
CD53-201ENST00000271324 CCNA1P78396 465 aa7.69□□□□□ -1.18
CD53-201ENST00000271324 NOLC1Q14978 699 aaKnown RBP eCLIP7.69□□□□□ -1.181e-7■□□□□ 8.3
CD53-201ENST00000271324 SYCP1Q15431 976 aa7.69□□□□□ -1.18
CD53-201ENST00000271324 SLFNL1Q499Z3 407 aa7.69□□□□□ -1.18
CD53-201ENST00000271324 ANKRD45Q5TZF3 282 aa7.69□□□□□ -1.18
CD53-201ENST00000271324 LBX2Q6XYB7 198 aa7.69□□□□□ -1.18
CD53-201ENST00000271324 CLEC10AQ8IUN9 316 aa7.69□□□□□ -1.18
CD53-201ENST00000271324 SLC44A5Q8NCS7 719 aa7.69□□□□□ -1.18
CD53-201ENST00000271324 BADQ92934 168 aa7.69□□□□□ -1.18
CD53-201ENST00000271324 CDX2Q99626 313 aaPredicted RBP7.69□□□□□ -1.18
CD53-201ENST00000271324 RIOK1Q9BRS2 568 aaKnown RBP7.69□□□□□ -1.18
CD53-201ENST00000271324 MOV10L1Q9BXT6 1211 aaKnown RBP7.69□□□□□ -1.18
CD53-201ENST00000271324 TTYH1Q9H313 450 aaPredicted RBP7.69□□□□□ -1.18
CD53-201ENST00000271324 PRDM5Q9NQX1 630 aaPredicted RBP7.69□□□□□ -1.18
CD53-201ENST00000271324 TRIM43BA6NCK2 446 aa7.68□□□□□ -1.18
CD53-201ENST00000271324 MPHOSPH10O00566 681 aaKnown RBP7.68□□□□□ -1.18
CD53-201ENST00000271324 ERCC3P19447 782 aa7.68□□□□□ -1.18
CD53-201ENST00000271324 ADCYAP1R1P41586 468 aa7.68□□□□□ -1.18
CD53-201ENST00000271324 USP14P54578 494 aa7.68□□□□□ -1.18
CD53-201ENST00000271324 FAM193AP78312 1265 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms