RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 TGFBRAP1Q8WUH2 860 aa12.82□□□□□ -0.36
VPS33A-201ENST00000267199 A0A087WUV0 522 aaPredicted RBP12.81□□□□□ -0.36
VPS33A-201ENST00000267199 SCG2P13521 617 aa12.81□□□□□ -0.36
VPS33A-201ENST00000267199 MRPL12P52815 198 aaKnown RBP12.81□□□□□ -0.36
VPS33A-201ENST00000267199 PPP1R7Q15435 360 aa12.81□□□□□ -0.36
VPS33A-201ENST00000267199 TSGA10IPQ3SY00 556 aa12.81□□□□□ -0.36
VPS33A-201ENST00000267199 ICE2Q659A1 982 aa12.81□□□□□ -0.36
VPS33A-201ENST00000267199 ARMCX5Q6P1M9 558 aa12.81□□□□□ -0.36
VPS33A-201ENST00000267199 LCORLQ8N3X6 602 aa12.81□□□□□ -0.36
VPS33A-201ENST00000267199 GPKOWQ92917 476 aaPredicted RBP eCLIP12.81□□□□□ -0.36
VPS33A-201ENST00000267199 JPH2Q9BR39 696 aaPredicted RBP12.81□□□□□ -0.36
VPS33A-201ENST00000267199 MAN1B1Q9UKM7 699 aa12.81□□□□□ -0.36
VPS33A-201ENST00000267199 SPDYE3A6NKU9 549 aa12.81□□□□□ -0.36
VPS33A-201ENST00000267199 UFL1O94874 794 aa12.81□□□□□ -0.36
VPS33A-201ENST00000267199 RPSAP08865 295 aaKnown RBP12.81□□□□□ -0.36
VPS33A-201ENST00000267199 CTNNA1P35221 906 aaKnown RBP12.81□□□□□ -0.36
VPS33A-201ENST00000267199 COPB1P53618 953 aaKnown RBP12.81□□□□□ -0.36
VPS33A-201ENST00000267199 INF2Q27J81 1249 aa12.81□□□□□ -0.36
VPS33A-201ENST00000267199 FMR1NBQ8N0W7 255 aaPredicted RBP12.81□□□□□ -0.36
VPS33A-201ENST00000267199 PNMA1Q8ND90 353 aa12.81□□□□□ -0.36
VPS33A-201ENST00000267199 STMN4Q9H169 189 aaPredicted RBP12.81□□□□□ -0.36
VPS33A-201ENST00000267199 PRDM4Q9UKN5 801 aa12.81□□□□□ -0.36
VPS33A-201ENST00000267199 EIF3CLB5ME19 914 aaKnown RBP12.81□□□□□ -0.36
VPS33A-201ENST00000267199 GUCY2DQ02846 1103 aa12.81□□□□□ -0.36
VPS33A-201ENST00000267199 KRT25Q7Z3Z0 450 aa12.81□□□□□ -0.36
VPS33A-201ENST00000267199 TRIM58Q8NG06 486 aa12.81□□□□□ -0.36
VPS33A-201ENST00000267199 UHMK1Q8TAS1 419 aaKnown RBP12.81□□□□□ -0.36
VPS33A-201ENST00000267199 SNX29Q8TEQ0 813 aa12.81□□□□□ -0.36
VPS33A-201ENST00000267199 MRRFQ96E11 262 aaKnown RBP12.81□□□□□ -0.36
VPS33A-201ENST00000267199 EIF3CQ99613 913 aaKnown RBP12.81□□□□□ -0.36
VPS33A-201ENST00000267199 RNF26Q9BY78 433 aaPredicted RBP12.81□□□□□ -0.36
VPS33A-201ENST00000267199 IRX2Q9BZI1 471 aaPredicted RBP12.81□□□□□ -0.36
VPS33A-201ENST00000267199 MMP1P03956 469 aa12.81□□□□□ -0.36
VPS33A-201ENST00000267199 MXRA7P84157 204 aa12.81□□□□□ -0.36
VPS33A-201ENST00000267199 CALCOCO2Q13137 446 aa12.81□□□□□ -0.36
VPS33A-201ENST00000267199 NBPF14Q5TI25 921 aa12.81□□□□□ -0.36
VPS33A-201ENST00000267199 E4F1Q66K89 784 aaPredicted RBP12.81□□□□□ -0.36
VPS33A-201ENST00000267199 KSR1Q8IVT5 923 aa12.81□□□□□ -0.36
VPS33A-201ENST00000267199 CCDC77Q9BR77 488 aa12.81□□□□□ -0.36
VPS33A-201ENST00000267199 EFCC1Q9HA90 598 aa12.81□□□□□ -0.36
VPS33A-201ENST00000267199 PCDHB6Q9Y5E3 794 aa12.81□□□□□ -0.36
VPS33A-201ENST00000267199 NPHP4O75161 1426 aaPredicted RBP12.8□□□□□ -0.36
VPS33A-201ENST00000267199 CTIFO43310 598 aaKnown RBP12.8□□□□□ -0.36
VPS33A-201ENST00000267199 NELFCDQ8IXH7 590 aa12.8□□□□□ -0.36
VPS33A-201ENST00000267199 CCDC65Q8IXS2 484 aa12.8□□□□□ -0.36
VPS33A-201ENST00000267199 MGARPQ8TDB4 240 aa12.8□□□□□ -0.36
VPS33A-201ENST00000267199 TBC1D31Q96DN5 1066 aa12.8□□□□□ -0.36
VPS33A-201ENST00000267199 EHMT1Q9H9B1 1298 aa12.8□□□□□ -0.36
VPS33A-201ENST00000267199 RIPOR2Q9Y4F9 1068 aa12.8□□□□□ -0.36
VPS33A-201ENST00000267199 ADGRL3Q9HAR2 1447 aa12.8□□□□□ -0.36
VPS33A-201ENST00000267199 CCDC172P0C7W6 258 aa12.8□□□□□ -0.36
VPS33A-201ENST00000267199 SARNPP82979 210 aaKnown RBP12.8□□□□□ -0.36
VPS33A-201ENST00000267199 C2orf54Q08AI8 447 aa12.8□□□□□ -0.36
VPS33A-201ENST00000267199 RPS6KA1Q15418 735 aa12.8□□□□□ -0.36
VPS33A-201ENST00000267199 CNBD1Q8NA66 436 aa12.8□□□□□ -0.36
VPS33A-201ENST00000267199 OSBPL5Q9H0X9 879 aaPredicted RBP12.8□□□□□ -0.36
VPS33A-201ENST00000267199 STK38LQ9Y2H1 464 aa12.8□□□□□ -0.36
VPS33A-201ENST00000267199 MAP2P11137 1827 aaKnown RBP12.8□□□□□ -0.36
VPS33A-201ENST00000267199 GOLGA8KD6RF30 607 aa12.8□□□□□ -0.36
VPS33A-201ENST00000267199 ERCC5P28715 1186 aaPredicted RBP12.8□□□□□ -0.36
VPS33A-201ENST00000267199 LIFRP42702 1097 aa12.8□□□□□ -0.36
VPS33A-201ENST00000267199 KLHL30Q0D2K2 578 aa12.8□□□□□ -0.36
VPS33A-201ENST00000267199 INTS8Q75QN2 995 aaKnown RBP12.8□□□□□ -0.36
VPS33A-201ENST00000267199 WDR24Q96S15 920 aa12.8□□□□□ -0.36
VPS33A-201ENST00000267199 CDCA7Q9BWT1 371 aaPredicted RBP12.8□□□□□ -0.36
VPS33A-201ENST00000267199 HYOU1Q9Y4L1 999 aa12.8□□□□□ -0.36
VPS33A-201ENST00000267199 CCDC160A6NGH7 325 aa12.79□□□□□ -0.36
VPS33A-201ENST00000267199 GTPBP6O43824 516 aaPredicted RBP12.79□□□□□ -0.36
VPS33A-201ENST00000267199 CLTAP09496 248 aa12.79□□□□□ -0.36
VPS33A-201ENST00000267199 CCZ1BP86790 482 aa12.79□□□□□ -0.36
VPS33A-201ENST00000267199 CCZ1P86791 482 aaPredicted RBP12.79□□□□□ -0.36
VPS33A-201ENST00000267199 CYP27A1Q02318 531 aa12.79□□□□□ -0.36
VPS33A-201ENST00000267199 RASGRF1Q13972 1273 aa12.79□□□□□ -0.36
VPS33A-201ENST00000267199 TBC1D10CQ8IV04 446 aa12.79□□□□□ -0.36
VPS33A-201ENST00000267199 CACNA2D3Q8IZS8 1091 aa12.79□□□□□ -0.36
VPS33A-201ENST00000267199 GSDMAQ96QA5 445 aa12.79□□□□□ -0.36
VPS33A-201ENST00000267199 STRBPQ96SI9 672 aaKnown RBP12.79□□□□□ -0.36
VPS33A-201ENST00000267199 ARPP21Q9UBL0 812 aaPredicted RBP12.79□□□□□ -0.36
VPS33A-201ENST00000267199 MROH2AA6NES4 1674 aa12.79□□□□□ -0.36
VPS33A-201ENST00000267199 SLFN14P0C7P3 912 aa12.79□□□□□ -0.36
VPS33A-201ENST00000267199 CDC25AP30304 524 aa12.79□□□□□ -0.36
VPS33A-201ENST00000267199 GCKP35557 465 aa12.79□□□□□ -0.36
VPS33A-201ENST00000267199 IL6STP40189 918 aaPredicted RBP12.79□□□□□ -0.36
VPS33A-201ENST00000267199 DYNLL1P63167 89 aaKnown RBP12.79□□□□□ -0.36
VPS33A-201ENST00000267199 MAP3K9P80192 1104 aa12.79□□□□□ -0.36
VPS33A-201ENST00000267199 PLS1Q14651 629 aa12.79□□□□□ -0.36
VPS33A-201ENST00000267199 SETDB1Q15047 1291 aa12.79□□□□□ -0.36
VPS33A-201ENST00000267199 C6orf163Q5TEZ5 329 aa12.79□□□□□ -0.36
VPS33A-201ENST00000267199 DHX40Q8IX18 779 aaKnown RBP12.79□□□□□ -0.36
VPS33A-201ENST00000267199 REXO1Q8N1G1 1221 aaKnown RBP12.79□□□□□ -0.36
VPS33A-201ENST00000267199 PLVAPQ9BX97 442 aa12.79□□□□□ -0.36
VPS33A-201ENST00000267199 ALDH8A1Q9H2A2 487 aaPredicted RBP12.79□□□□□ -0.36
VPS33A-201ENST00000267199 CEP83Q9Y592 693 aa12.79□□□□□ -0.36
VPS33A-201ENST00000267199 CYP2C19P33261 490 aa12.79□□□□□ -0.36
VPS33A-201ENST00000267199 HLFQ16534 295 aa12.79□□□□□ -0.36
VPS33A-201ENST00000267199 CCDC170Q8IYT3 715 aa12.79□□□□□ -0.36
VPS33A-201ENST00000267199 PIGBQ92521 554 aa12.79□□□□□ -0.36
VPS33A-201ENST00000267199 UTP11Q9Y3A2 253 aaKnown RBP12.79□□□□□ -0.36
VPS33A-201ENST00000267199 SMCO2A6NFE2 343 aa12.79□□□□□ -0.36
VPS33A-201ENST00000267199 KCNK3O14649 394 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms