RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 CCDC114Q96M63 670 aa12.9□□□□□ -0.34
CLSTN3-201ENST00000266546 OSBPL5Q9H0X9 879 aaPredicted RBP12.9□□□□□ -0.34
CLSTN3-201ENST00000266546 GOPCQ9HD26 462 aa12.9□□□□□ -0.34
CLSTN3-201ENST00000266546 EXOC1Q9NV70 894 aa12.9□□□□□ -0.34
CLSTN3-201ENST00000266546 POLR3EQ9NVU0 708 aa12.9□□□□□ -0.34
CLSTN3-201ENST00000266546 ARFGEF2Q9Y6D5 1785 aa12.9□□□□□ -0.34
CLSTN3-201ENST00000266546 RAD51AP2Q09MP3 1159 aa12.9□□□□□ -0.34
CLSTN3-201ENST00000266546 ZFYVE27Q5T4F4 411 aa12.9□□□□□ -0.34
CLSTN3-201ENST00000266546 VPS36Q86VN1 386 aa12.9□□□□□ -0.34
CLSTN3-201ENST00000266546 IFT81Q8WYA0 676 aa12.9□□□□□ -0.34
CLSTN3-201ENST00000266546 ST7Q9NRC1 585 aa12.9□□□□□ -0.34
CLSTN3-201ENST00000266546 SEPT11Q9NVA2 429 aaKnown RBP12.9□□□□□ -0.34
CLSTN3-201ENST00000266546 SERTAD1Q9UHV2 236 aa12.9□□□□□ -0.34
CLSTN3-201ENST00000266546 VWA3AA6NCI4 1184 aa12.89□□□□□ -0.35
CLSTN3-201ENST00000266546 GTF2IP78347 998 aa12.89□□□□□ -0.35
CLSTN3-201ENST00000266546 TOB2Q14106 344 aaPredicted RBP12.89□□□□□ -0.35
CLSTN3-201ENST00000266546 VGLL2Q8N8G2 317 aa12.89□□□□□ -0.35
CLSTN3-201ENST00000266546 IL17RAQ96F46 866 aa12.89□□□□□ -0.35
CLSTN3-201ENST00000266546 MMRN2Q9H8L6 949 aa12.89□□□□□ -0.35
CLSTN3-201ENST00000266546 ZCCHC17Q9NP64 241 aaKnown RBP12.89□□□□□ -0.35
CLSTN3-201ENST00000266546 ADAM21Q9UKJ8 722 aa12.89□□□□□ -0.35
CLSTN3-201ENST00000266546 PDS5AQ29RF7 1337 aaKnown RBP12.89□□□□□ -0.35
CLSTN3-201ENST00000266546 CCDC40Q4G0X9 1142 aa12.89□□□□□ -0.35
CLSTN3-201ENST00000266546 VAT1LQ9HCJ6 419 aa12.89□□□□□ -0.35
CLSTN3-201ENST00000266546 SEC63Q9UGP8 760 aaKnown RBP12.89□□□□□ -0.35
CLSTN3-201ENST00000266546 FAN1Q9Y2M0 1017 aa12.89□□□□□ -0.35
CLSTN3-201ENST00000266546 DOT1LQ8TEK3 1739 aa12.89□□□□□ -0.35
CLSTN3-201ENST00000266546 USP17L12C9JPN9 530 aa12.89□□□□□ -0.35
CLSTN3-201ENST00000266546 USP17L21D6R901 530 aa12.89□□□□□ -0.35
CLSTN3-201ENST00000266546 CCDC51Q96ER9 411 aa12.89□□□□□ -0.35
CLSTN3-201ENST00000266546 CLIC6Q96NY7 704 aa12.89□□□□□ -0.35
CLSTN3-201ENST00000266546 A6NNZ2 444 aa12.88□□□□□ -0.35
CLSTN3-201ENST00000266546 SNAP23O00161 211 aa12.88□□□□□ -0.35
CLSTN3-201ENST00000266546 ADD1P35611 737 aaKnown RBP12.88□□□□□ -0.35
CLSTN3-201ENST00000266546 KRT2P35908 639 aa12.88□□□□□ -0.35
CLSTN3-201ENST00000266546 SLC39A14Q15043 492 aa12.88□□□□□ -0.35
CLSTN3-201ENST00000266546 TUBB8Q3ZCM7 444 aa12.88□□□□□ -0.35
CLSTN3-201ENST00000266546 LCORLQ8N3X6 602 aa12.88□□□□□ -0.35
CLSTN3-201ENST00000266546 GYS2P54840 703 aa12.88□□□□□ -0.35
CLSTN3-201ENST00000266546 PPFIA1Q13136 1202 aa12.88□□□□□ -0.35
CLSTN3-201ENST00000266546 SND1Q7KZF4 910 aaKnown RBP eCLIP12.88□□□□□ -0.353e-7■■■□□ 16
CLSTN3-201ENST00000266546 JDP2Q8WYK2 163 aa12.88□□□□□ -0.35
CLSTN3-201ENST00000266546 EFCC1Q9HA90 598 aa12.88□□□□□ -0.35
CLSTN3-201ENST00000266546 CD209Q9NNX6 404 aa12.88□□□□□ -0.35
CLSTN3-201ENST00000266546 TAB2Q9NYJ8 693 aa12.88□□□□□ -0.35
CLSTN3-201ENST00000266546 MAPK8IP1Q9UQF2 711 aa12.88□□□□□ -0.35
CLSTN3-201ENST00000266546 SUGT1Q9Y2Z0 365 aa12.88□□□□□ -0.35
CLSTN3-201ENST00000266546 SAR1BQ9Y6B6 198 aa12.88□□□□□ -0.35
CLSTN3-201ENST00000266546 F8W031 263 aaPredicted RBP12.88□□□□□ -0.35
CLSTN3-201ENST00000266546 MPHOSPH10O00566 681 aaKnown RBP12.88□□□□□ -0.35
CLSTN3-201ENST00000266546 SLFN14P0C7P3 912 aa12.88□□□□□ -0.35
CLSTN3-201ENST00000266546 CC2D1AQ6P1N0 951 aaPredicted RBP12.88□□□□□ -0.35
CLSTN3-201ENST00000266546 VSTM4Q8IW00 320 aa12.88□□□□□ -0.35
CLSTN3-201ENST00000266546 TEKT1Q969V4 418 aa12.88□□□□□ -0.35
CLSTN3-201ENST00000266546 JAKMIP2Q96AA8 810 aa12.88□□□□□ -0.35
CLSTN3-201ENST00000266546 CALML4Q96GE6 196 aa12.88□□□□□ -0.35
CLSTN3-201ENST00000266546 FAM204AQ9H8W3 233 aa12.88□□□□□ -0.35
CLSTN3-201ENST00000266546 LIFRP42702 1097 aa12.88□□□□□ -0.35
CLSTN3-201ENST00000266546 MECOMQ03112 1051 aa12.88□□□□□ -0.35
CLSTN3-201ENST00000266546 RBM26Q5T8P6 1007 aaKnown RBP12.88□□□□□ -0.35
CLSTN3-201ENST00000266546 SMIM5Q71RC9 77 aa12.88□□□□□ -0.35
CLSTN3-201ENST00000266546 RAB34Q9BZG1 259 aa12.88□□□□□ -0.35
CLSTN3-201ENST00000266546 DEXIO95424 95 aa12.87□□□□□ -0.35
CLSTN3-201ENST00000266546 TBC1D8BQ0IIM8 1120 aa12.87□□□□□ -0.35
CLSTN3-201ENST00000266546 IQCB1Q15051 598 aa12.87□□□□□ -0.35
CLSTN3-201ENST00000266546 ZMYM6O95789 1325 aa12.87□□□□□ -0.35
CLSTN3-201ENST00000266546 ZNF174Q15697 407 aa12.87□□□□□ -0.35
CLSTN3-201ENST00000266546 WWC2Q6AWC2 1192 aa12.87□□□□□ -0.35
CLSTN3-201ENST00000266546 RPGRIP1Q96KN7 1286 aa12.87□□□□□ -0.35
CLSTN3-201ENST00000266546 LIG3P49916 1009 aa12.87□□□□□ -0.35
CLSTN3-201ENST00000266546 ASIC1P78348 528 aa12.87□□□□□ -0.35
CLSTN3-201ENST00000266546 SLC16A10Q8TF71 515 aa12.87□□□□□ -0.35
CLSTN3-201ENST00000266546 SDR42E1Q8WUS8 393 aa12.87□□□□□ -0.35
CLSTN3-201ENST00000266546 STAG1Q8WVM7 1258 aa12.87□□□□□ -0.35
CLSTN3-201ENST00000266546 ATP6V0A2Q9Y487 856 aa12.87□□□□□ -0.35
CLSTN3-201ENST00000266546 CHGBP05060 677 aa12.86□□□□□ -0.35
CLSTN3-201ENST00000266546 CYP2C19P33261 490 aa12.86□□□□□ -0.35
CLSTN3-201ENST00000266546 PAK1Q13153 545 aa12.86□□□□□ -0.35
CLSTN3-201ENST00000266546 C8orf74Q6P047 294 aa12.86□□□□□ -0.35
CLSTN3-201ENST00000266546 BCAS4Q8TDM0 211 aa12.86□□□□□ -0.35
CLSTN3-201ENST00000266546 GOLPH3LQ9H4A5 285 aa12.86□□□□□ -0.35
CLSTN3-201ENST00000266546 KCNJ14Q9UNX9 436 aa12.86□□□□□ -0.35
CLSTN3-201ENST00000266546 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.86□□□□□ -0.35
CLSTN3-201ENST00000266546 RIC1Q4ADV7 1423 aa12.86□□□□□ -0.35
CLSTN3-201ENST00000266546 MAP2K2P36507 400 aa12.86□□□□□ -0.35
CLSTN3-201ENST00000266546 GPSM2P81274 684 aa12.86□□□□□ -0.35
CLSTN3-201ENST00000266546 CCZ1BP86790 482 aa12.86□□□□□ -0.35
CLSTN3-201ENST00000266546 CCZ1P86791 482 aaPredicted RBP12.86□□□□□ -0.35
CLSTN3-201ENST00000266546 TMEM266Q2M3C6 531 aa12.86□□□□□ -0.35
CLSTN3-201ENST00000266546 SLC35F6Q8N357 371 aa12.86□□□□□ -0.35
CLSTN3-201ENST00000266546 TRIML1Q8N9V2 468 aa12.86□□□□□ -0.35
CLSTN3-201ENST00000266546 SCLT1Q96NL6 688 aa12.86□□□□□ -0.35
CLSTN3-201ENST00000266546 MYCBPQ99417 103 aaPredicted RBP12.86□□□□□ -0.35
CLSTN3-201ENST00000266546 TSGA10Q9BZW7 698 aa12.86□□□□□ -0.35
CLSTN3-201ENST00000266546 CALML3P27482 149 aa12.86□□□□□ -0.35
CLSTN3-201ENST00000266546 MCM7P33993 719 aa12.86□□□□□ -0.35
CLSTN3-201ENST00000266546 PODNQ7Z5L7 613 aa12.86□□□□□ -0.35
CLSTN3-201ENST00000266546 STAMQ92783 540 aa12.86□□□□□ -0.35
CLSTN3-201ENST00000266546 JRKLQ9Y4A0 524 aa12.86□□□□□ -0.35
CLSTN3-201ENST00000266546 NEFHP12036 1026 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms