RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 UBXN2AP68543 259 aa16.27■□□□□ 0.2
PDLIM2-201ENST00000265810 KLRC3Q07444 240 aa16.27■□□□□ 0.2
PDLIM2-201ENST00000265810 RASA3Q14644 834 aa16.27■□□□□ 0.2
PDLIM2-201ENST00000265810 KIF4BQ2VIQ3 1234 aa16.27■□□□□ 0.2
PDLIM2-201ENST00000265810 MMRN2Q9H8L6 949 aa16.27■□□□□ 0.2
PDLIM2-201ENST00000265810 IFNKQ9P0W0 207 aa16.27■□□□□ 0.2
PDLIM2-201ENST00000265810 KIAA1468Q9P260 1216 aa16.27■□□□□ 0.2
PDLIM2-201ENST00000265810 SERPINA10Q9UK55 444 aa16.27■□□□□ 0.2
PDLIM2-201ENST00000265810 CTAGE1Q96RT6 745 aa16.27■□□□□ 0.19
PDLIM2-201ENST00000265810 WRNIP1Q96S55 665 aa16.27■□□□□ 0.19
PDLIM2-201ENST00000265810 CBX8Q9HC52 389 aa16.27■□□□□ 0.19
PDLIM2-201ENST00000265810 RGPD5Q99666 1765 aa16.27■□□□□ 0.19
PDLIM2-201ENST00000265810 TESPA1A2RU30 521 aaPredicted RBP16.26■□□□□ 0.19
PDLIM2-201ENST00000265810 TGFB2P61812 414 aa16.26■□□□□ 0.19
PDLIM2-201ENST00000265810 GRM4Q14833 912 aa16.26■□□□□ 0.19
PDLIM2-201ENST00000265810 UBE2SQ16763 222 aa16.26■□□□□ 0.19
PDLIM2-201ENST00000265810 PFKFB3Q16875 520 aaPredicted RBP16.26■□□□□ 0.19
PDLIM2-201ENST00000265810 ARHGAP29Q52LW3 1261 aa16.26■□□□□ 0.19
PDLIM2-201ENST00000265810 MCTP2Q6DN12 878 aa16.26■□□□□ 0.19
PDLIM2-201ENST00000265810 SYMPKQ92797 1274 aaKnown RBP16.26■□□□□ 0.19
PDLIM2-201ENST00000265810 TRMT1Q9NXH9 659 aaKnown RBP16.26■□□□□ 0.19
PDLIM2-201ENST00000265810 A0A1W2PQ27 194 aa16.26■□□□□ 0.19
PDLIM2-201ENST00000265810 A0A1W2PQ64 194 aa16.26■□□□□ 0.19
PDLIM2-201ENST00000265810 A0A1W2PQD8 194 aa16.26■□□□□ 0.19
PDLIM2-201ENST00000265810 ONECUT3O60422 494 aaPredicted RBP16.26■□□□□ 0.19
PDLIM2-201ENST00000265810 GAS7O60861 476 aa16.26■□□□□ 0.19
PDLIM2-201ENST00000265810 FOSP01100 380 aaPredicted RBP16.26■□□□□ 0.19
PDLIM2-201ENST00000265810 RASA1P20936 1047 aa16.26■□□□□ 0.19
PDLIM2-201ENST00000265810 KCNB2Q92953 911 aa16.26■□□□□ 0.19
PDLIM2-201ENST00000265810 ZNF70Q9UC06 446 aaPredicted RBP16.26■□□□□ 0.19
PDLIM2-201ENST00000265810 RIC1Q4ADV7 1423 aa16.26■□□□□ 0.19
PDLIM2-201ENST00000265810 STK36Q9NRP7 1315 aa16.26■□□□□ 0.19
PDLIM2-201ENST00000265810 PPP6R2O75170 966 aa16.26■□□□□ 0.19
PDLIM2-201ENST00000265810 UBE2Q2Q8WVN8 375 aa16.26■□□□□ 0.19
PDLIM2-201ENST00000265810 HERC5Q9UII4 1024 aaKnown RBP16.26■□□□□ 0.19
PDLIM2-201ENST00000265810 DNM3Q9UQ16 869 aa16.26■□□□□ 0.19
PDLIM2-201ENST00000265810 GUCY1A2P33402 732 aa16.26■□□□□ 0.19
PDLIM2-201ENST00000265810 ARHGEF16Q5VV41 709 aa16.26■□□□□ 0.19
PDLIM2-201ENST00000265810 KIAA1328Q86T90 577 aa16.26■□□□□ 0.19
PDLIM2-201ENST00000265810 MCF2L2Q86YR7 1114 aa16.26■□□□□ 0.19
PDLIM2-201ENST00000265810 AHDC1Q5TGY3 1603 aaPredicted RBP16.26■□□□□ 0.19
PDLIM2-201ENST00000265810 FAM83BQ5T0W9 1011 aa16.25■□□□□ 0.19
PDLIM2-201ENST00000265810 ANKRD35Q8N283 1001 aa16.25■□□□□ 0.19
PDLIM2-201ENST00000265810 CAGE1Q8TC20 777 aa16.25■□□□□ 0.19
PDLIM2-201ENST00000265810 OXER1Q8TDS5 423 aa16.25■□□□□ 0.19
PDLIM2-201ENST00000265810 MTMR4Q9NYA4 1195 aa16.25■□□□□ 0.19
PDLIM2-201ENST00000265810 BICDL2A1A5D9 508 aa16.25■□□□□ 0.19
PDLIM2-201ENST00000265810 TRIM21P19474 475 aaKnown RBP16.25■□□□□ 0.19
PDLIM2-201ENST00000265810 NLRP12P59046 1061 aa16.25■□□□□ 0.19
PDLIM2-201ENST00000265810 NFIAQ12857 509 aa16.25■□□□□ 0.19
PDLIM2-201ENST00000265810 C16orf86Q6ZW13 317 aa16.25■□□□□ 0.19
PDLIM2-201ENST00000265810 ALS2Q96Q42 1657 aa16.25■□□□□ 0.19
PDLIM2-201ENST00000265810 USP17L10C9JJH3 530 aa16.25■□□□□ 0.19
PDLIM2-201ENST00000265810 hCG_1984214I3L0E3 225 aa16.25■□□□□ 0.19
PDLIM2-201ENST00000265810 CDC25AP30304 524 aa16.25■□□□□ 0.19
PDLIM2-201ENST00000265810 TDRD12Q587J7 1177 aaKnown RBP16.25■□□□□ 0.19
PDLIM2-201ENST00000265810 ODF2Q5BJF6 829 aa16.25■□□□□ 0.19
PDLIM2-201ENST00000265810 SRBD1Q8N5C6 995 aaKnown RBP16.25■□□□□ 0.19
PDLIM2-201ENST00000265810 ZNF713Q8N859 430 aaPredicted RBP16.25■□□□□ 0.19
PDLIM2-201ENST00000265810 PRMT6Q96LA8 375 aaPredicted RBP16.25■□□□□ 0.19
PDLIM2-201ENST00000265810 RTFDC1Q9BY42 306 aaPredicted RBP16.25■□□□□ 0.19
PDLIM2-201ENST00000265810 ZHX2Q9Y6X8 837 aa16.25■□□□□ 0.19
PDLIM2-201ENST00000265810 ENTPD3O75355 529 aa16.24■□□□□ 0.19
PDLIM2-201ENST00000265810 GMPSP49915 693 aaPredicted RBP16.24■□□□□ 0.19
PDLIM2-201ENST00000265810 CETN1Q12798 172 aa16.24■□□□□ 0.19
PDLIM2-201ENST00000265810 KRBA2Q6ZNG9 492 aa16.24■□□□□ 0.19
PDLIM2-201ENST00000265810 MAEAQ7L5Y9 396 aa16.24■□□□□ 0.19
PDLIM2-201ENST00000265810 TPH2Q8IWU9 490 aa16.24■□□□□ 0.19
PDLIM2-201ENST00000265810 MLKLQ8NB16 471 aa16.24■□□□□ 0.19
PDLIM2-201ENST00000265810 CTNND2Q9UQB3 1225 aa16.24■□□□□ 0.19
PDLIM2-201ENST00000265810 HERC4Q5GLZ8 1057 aaPredicted RBP16.24■□□□□ 0.19
PDLIM2-201ENST00000265810 DCAF4Q8WV16 495 aa16.24■□□□□ 0.19
PDLIM2-201ENST00000265810 ANAPC4Q9UJX5 808 aa16.24■□□□□ 0.19
PDLIM2-201ENST00000265810 FAM208AQ9UK61 1670 aaKnown RBP16.24■□□□□ 0.19
PDLIM2-201ENST00000265810 SAMD7Q7Z3H4 446 aa16.24■□□□□ 0.19
PDLIM2-201ENST00000265810 NCAPG2Q86XI2 1143 aa16.24■□□□□ 0.19
PDLIM2-201ENST00000265810 PLA2G4DQ86XP0 818 aa16.24■□□□□ 0.19
PDLIM2-201ENST00000265810 RGPD1P0DJD0 1748 aa16.24■□□□□ 0.19
PDLIM2-201ENST00000265810 SPP2Q13103 211 aa16.24■□□□□ 0.19
PDLIM2-201ENST00000265810 HS2ST1Q7LGA3 356 aa16.24■□□□□ 0.19
PDLIM2-201ENST00000265810 ARHGEF35A5YM69 484 aa16.23■□□□□ 0.19
PDLIM2-201ENST00000265810 KARSQ15046 597 aaKnown RBP16.23■□□□□ 0.19
PDLIM2-201ENST00000265810 GTPBP4Q9BZE4 634 aaKnown RBP16.23■□□□□ 0.19
PDLIM2-201ENST00000265810 ZBTB5O15062 677 aa16.23■□□□□ 0.19
PDLIM2-201ENST00000265810 IREB2P48200 963 aaKnown RBP16.23■□□□□ 0.19
PDLIM2-201ENST00000265810 RCSD1Q6JBY9 416 aa16.23■□□□□ 0.19
PDLIM2-201ENST00000265810 CNNM4Q6P4Q7 775 aa16.23■□□□□ 0.19
PDLIM2-201ENST00000265810 TTC12Q9H892 705 aaPredicted RBP16.23■□□□□ 0.19
PDLIM2-201ENST00000265810 KCNQ5Q9NR82 932 aa16.23■□□□□ 0.19
PDLIM2-201ENST00000265810 TRPM3Q9HCF6 1732 aaPredicted RBP16.23■□□□□ 0.19
PDLIM2-201ENST00000265810 KCPQ6ZWJ8 1503 aa16.23■□□□□ 0.19
PDLIM2-201ENST00000265810 HOXA13P31271 388 aaPredicted RBP16.23■□□□□ 0.19
PDLIM2-201ENST00000265810 LONP1P36776 959 aaKnown RBP16.23■□□□□ 0.19
PDLIM2-201ENST00000265810 SPA17Q15506 151 aa16.23■□□□□ 0.19
PDLIM2-201ENST00000265810 NLRX1Q86UT6 975 aa16.23■□□□□ 0.19
PDLIM2-201ENST00000265810 FAM160B2Q86V87 743 aa16.23■□□□□ 0.19
PDLIM2-201ENST00000265810 TBC1D7Q9P0N9 293 aa16.23■□□□□ 0.19
PDLIM2-201ENST00000265810 HDLBPQ00341 1268 aaKnown RBP16.23■□□□□ 0.19
PDLIM2-201ENST00000265810 APOBEC3FQ8IUX4 373 aaKnown RBP16.23■□□□□ 0.19
PDLIM2-201ENST00000265810 TCHPQ9BT92 498 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms