RNA–Protein interactions for RNA: ENST00000264346.11

HERC6-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC6, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-201ENST00000264346 TRIM49BA6NDI0 452 aa14.07□□□□□ -0.16
HERC6-201ENST00000264346 SNAP25P60880 206 aa14.07□□□□□ -0.16
HERC6-201ENST00000264346 FAM114A1Q8IWE2 563 aa14.07□□□□□ -0.16
HERC6-201ENST00000264346 CRACR2AQ9BSW2 395 aa14.07□□□□□ -0.16
HERC6-201ENST00000264346 FGFR2P21802 821 aa14.07□□□□□ -0.16
HERC6-201ENST00000264346 CYLC1P35663 651 aaPredicted RBP14.07□□□□□ -0.16
HERC6-201ENST00000264346 MRPL12P52815 198 aaKnown RBP14.07□□□□□ -0.16
HERC6-201ENST00000264346 LRRC41Q15345 812 aa14.07□□□□□ -0.16
HERC6-201ENST00000264346 MAEAQ7L5Y9 396 aa14.07□□□□□ -0.16
HERC6-201ENST00000264346 SPAG5Q96R06 1193 aa14.07□□□□□ -0.16
HERC6-201ENST00000264346 AGXT2Q9BYV1 514 aa14.07□□□□□ -0.16
HERC6-201ENST00000264346 NBPF3Q9H094 633 aa14.07□□□□□ -0.16
HERC6-201ENST00000264346 POLD4Q9HCU8 107 aa14.07□□□□□ -0.16
HERC6-201ENST00000264346 THRAP3Q9Y2W1 955 aaKnown RBP14.07□□□□□ -0.16
HERC6-201ENST00000264346 CDK8P49336 464 aa14.07□□□□□ -0.16
HERC6-201ENST00000264346 GRAPQ13588 217 aa14.07□□□□□ -0.16
HERC6-201ENST00000264346 KRT25Q7Z3Z0 450 aa14.07□□□□□ -0.16
HERC6-201ENST00000264346 VSTM4Q8IW00 320 aa14.07□□□□□ -0.16
HERC6-201ENST00000264346 NKX2-3Q8TAU0 364 aa14.07□□□□□ -0.16
HERC6-201ENST00000264346 GRAPLQ8TC17 118 aaPredicted RBP14.07□□□□□ -0.16
HERC6-201ENST00000264346 TBCKQ8TEA7 893 aa14.07□□□□□ -0.16
HERC6-201ENST00000264346 TMEM47Q9BQJ4 181 aa14.07□□□□□ -0.16
HERC6-201ENST00000264346 QTRT2Q9H974 415 aaKnown RBP14.07□□□□□ -0.16
HERC6-201ENST00000264346 NALCNQ8IZF0 1738 aa14.06□□□□□ -0.16
HERC6-201ENST00000264346 UBE2SQ16763 222 aa14.06□□□□□ -0.16
HERC6-201ENST00000264346 PTPROQ16827 1216 aa14.06□□□□□ -0.16
HERC6-201ENST00000264346 HERC4Q5GLZ8 1057 aaPredicted RBP14.06□□□□□ -0.16
HERC6-201ENST00000264346 ANKRD13CQ8N6S4 541 aa14.06□□□□□ -0.16
HERC6-201ENST00000264346 ACRBPQ8NEB7 543 aa14.06□□□□□ -0.16
HERC6-201ENST00000264346 GOLGA1Q92805 767 aa14.06□□□□□ -0.16
HERC6-201ENST00000264346 SPTLC3Q9NUV7 552 aa14.06□□□□□ -0.16
HERC6-201ENST00000264346 FBXO2Q9UK22 296 aaPredicted RBP14.06□□□□□ -0.16
HERC6-201ENST00000264346 FGFR1OPO95684 399 aaKnown RBP14.06□□□□□ -0.16
HERC6-201ENST00000264346 OR52Z1P0C646 297 aa14.06□□□□□ -0.16
HERC6-201ENST00000264346 KIF5AQ12840 1032 aa14.06□□□□□ -0.16
HERC6-201ENST00000264346 IRX2Q9BZI1 471 aaPredicted RBP14.06□□□□□ -0.16
HERC6-201ENST00000264346 LUC7LQ9NQ29 371 aaKnown RBP14.06□□□□□ -0.16
HERC6-201ENST00000264346 PCDHA4Q9UN74 947 aa14.06□□□□□ -0.16
HERC6-201ENST00000264346 LEMD3Q9Y2U8 911 aa14.06□□□□□ -0.16
HERC6-201ENST00000264346 PNPLA7Q6ZV29 1317 aa14.06□□□□□ -0.16
HERC6-201ENST00000264346 TMCO5BA8MYB1 307 aa14.06□□□□□ -0.16
HERC6-201ENST00000264346 MTF1Q14872 753 aa14.06□□□□□ -0.16
HERC6-201ENST00000264346 DCAF17Q5H9S7 520 aaPredicted RBP14.06□□□□□ -0.16
HERC6-201ENST00000264346 NEK8Q86SG6 692 aa14.06□□□□□ -0.16
HERC6-201ENST00000264346 FNBP4Q8N3X1 1017 aaPredicted RBP14.06□□□□□ -0.16
HERC6-201ENST00000264346 VGLL2Q8N8G2 317 aa14.06□□□□□ -0.16
HERC6-201ENST00000264346 MXD3Q9BW11 206 aa14.06□□□□□ -0.16
HERC6-201ENST00000264346 CD209Q9NNX6 404 aa14.06□□□□□ -0.16
HERC6-201ENST00000264346 TCRBV5S4A2TA0A5A2 114 aa14.05□□□□□ -0.16
HERC6-201ENST00000264346 ENC1O14682 589 aa14.05□□□□□ -0.16
HERC6-201ENST00000264346 GTPBP6O43824 516 aaPredicted RBP14.05□□□□□ -0.16
HERC6-201ENST00000264346 EIF3JO75822 258 aaKnown RBP14.05□□□□□ -0.16
HERC6-201ENST00000264346 ATP2B4P23634 1241 aa14.05□□□□□ -0.16
HERC6-201ENST00000264346 SF3B2Q13435 895 aaKnown RBP14.05□□□□□ -0.16
HERC6-201ENST00000264346 NCAPH2Q6IBW4 605 aa14.05□□□□□ -0.16
HERC6-201ENST00000264346 WDR19Q8NEZ3 1342 aa14.05□□□□□ -0.16
HERC6-201ENST00000264346 SEMA3EO15041 775 aa14.05□□□□□ -0.16
HERC6-201ENST00000264346 LMAN1P49257 510 aa14.05□□□□□ -0.16
HERC6-201ENST00000264346 SP4Q02446 784 aa14.05□□□□□ -0.16
HERC6-201ENST00000264346 NTRK3Q16288 839 aa14.05□□□□□ -0.16
HERC6-201ENST00000264346 OGFOD1Q8N543 542 aa14.05□□□□□ -0.16
HERC6-201ENST00000264346 B4DLN1 442 aa14.05□□□□□ -0.16
HERC6-201ENST00000264346 TBCAO75347 108 aaKnown RBP14.05□□□□□ -0.16
HERC6-201ENST00000264346 GDF11O95390 407 aa14.05□□□□□ -0.16
HERC6-201ENST00000264346 ENOX1Q8TC92 643 aaKnown RBP14.05□□□□□ -0.16
HERC6-201ENST00000264346 GSDMAQ96QA5 445 aa14.05□□□□□ -0.16
HERC6-201ENST00000264346 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.05□□□□□ -0.16
HERC6-201ENST00000264346 KDM4FA0A1W2PPD8 638 aa14.04□□□□□ -0.16
HERC6-201ENST00000264346 BICDL2A1A5D9 508 aa14.04□□□□□ -0.16
HERC6-201ENST00000264346 USP17L5A8MUK1 530 aa14.04□□□□□ -0.16
HERC6-201ENST00000264346 CFBP00751 764 aa14.04□□□□□ -0.16
HERC6-201ENST00000264346 TOB1P50616 345 aaPredicted RBP14.04□□□□□ -0.16
HERC6-201ENST00000264346 CYP4A11Q02928 519 aa14.04□□□□□ -0.16
HERC6-201ENST00000264346 TOGARAM2Q6ZUX3 1019 aa14.04□□□□□ -0.16
HERC6-201ENST00000264346 RASGRP2Q7LDG7 609 aa14.04□□□□□ -0.16
HERC6-201ENST00000264346 CEP95Q96GE4 821 aa14.04□□□□□ -0.16
HERC6-201ENST00000264346 DDX39AO00148 427 aaKnown RBP14.04□□□□□ -0.16
HERC6-201ENST00000264346 SEC31AO94979 1220 aaKnown RBP14.04□□□□□ -0.16
HERC6-201ENST00000264346 COPB1P53618 953 aaKnown RBP14.04□□□□□ -0.16
HERC6-201ENST00000264346 GPSM2P81274 684 aa14.04□□□□□ -0.16
HERC6-201ENST00000264346 CCZ1BP86790 482 aa14.04□□□□□ -0.16
HERC6-201ENST00000264346 CCZ1P86791 482 aaPredicted RBP14.04□□□□□ -0.16
HERC6-201ENST00000264346 PRPF4BQ13523 1007 aaKnown RBP14.04□□□□□ -0.16
HERC6-201ENST00000264346 SF3B3Q15393 1217 aaKnown RBP14.04□□□□□ -0.16
HERC6-201ENST00000264346 EARS2Q5JPH6 523 aaKnown RBP14.04□□□□□ -0.16
HERC6-201ENST00000264346 SYCP3Q8IZU3 236 aa14.04□□□□□ -0.16
HERC6-201ENST00000264346 TRIML1Q8N9V2 468 aa14.04□□□□□ -0.16
HERC6-201ENST00000264346 TBC1D22AQ8WUA7 517 aa14.04□□□□□ -0.16
HERC6-201ENST00000264346 HPS3Q969F9 1004 aa14.04□□□□□ -0.16
HERC6-201ENST00000264346 TEKT1Q969V4 418 aa14.04□□□□□ -0.16
HERC6-201ENST00000264346 FAM217BQ9NTX9 383 aaPredicted RBP14.04□□□□□ -0.16
HERC6-201ENST00000264346 TMEM260Q9NX78 707 aa14.04□□□□□ -0.16
HERC6-201ENST00000264346 STK36Q9NRP7 1315 aa14.04□□□□□ -0.16
HERC6-201ENST00000264346 KRT86O43790 486 aa14.04□□□□□ -0.16
HERC6-201ENST00000264346 PAFAH1B1P43034 410 aa14.04□□□□□ -0.16
HERC6-201ENST00000264346 CHMP4BP1P59074 171 aa14.04□□□□□ -0.16
HERC6-201ENST00000264346 PTPAQ15257 358 aa14.04□□□□□ -0.16
HERC6-201ENST00000264346 SYCP1Q15431 976 aa14.04□□□□□ -0.16
HERC6-201ENST00000264346 TYW1BQ6NUM6 668 aa14.04□□□□□ -0.16
HERC6-201ENST00000264346 GPATCH11Q8N954 259 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms