RNA–Protein interactions for RNA: ENST00000263946.7

PKP1-201, Transcript of plakophilin 1, humanhuman

TSL 5 BASIC

Gene PKP1, Length 5,447 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP1-201ENST00000263946 CASQ2O14958 399 aaPredicted RBP12.79□□□□□ -0.36
PKP1-201ENST00000263946 TRIM14Q14142 442 aa12.79□□□□□ -0.36
PKP1-201ENST00000263946 SMC1BQ8NDV3 1235 aa12.79□□□□□ -0.36
PKP1-201ENST00000263946 PLA2G12BQ9BX93 195 aa12.79□□□□□ -0.36
PKP1-201ENST00000263946 CSRNP2Q9H175 543 aa12.79□□□□□ -0.36
PKP1-201ENST00000263946 CETN3O15182 167 aa12.79□□□□□ -0.36
PKP1-201ENST00000263946 TUBBP07437 444 aa12.79□□□□□ -0.36
PKP1-201ENST00000263946 SNX16P57768 344 aa12.79□□□□□ -0.36
PKP1-201ENST00000263946 ICA1Q05084 483 aa12.79□□□□□ -0.36
PKP1-201ENST00000263946 DPCR1Q3MIW9 517 aa12.79□□□□□ -0.36
PKP1-201ENST00000263946 TRIML1Q8N9V2 468 aa12.79□□□□□ -0.36
PKP1-201ENST00000263946 RASGRP4Q8TDF6 673 aa12.79□□□□□ -0.36
PKP1-201ENST00000263946 ATRIPQ8WXE1 791 aa12.79□□□□□ -0.36
PKP1-201ENST00000263946 ARHGEF1Q92888 912 aaKnown RBP12.79□□□□□ -0.36
PKP1-201ENST00000263946 SERPINB13Q9UIV8 391 aa12.79□□□□□ -0.36
PKP1-201ENST00000263946 ODF2LQ9ULJ1 636 aa12.79□□□□□ -0.36
PKP1-201ENST00000263946 OVOS2A0A0G2JMS6 1433 aa12.79□□□□□ -0.36
PKP1-201ENST00000263946 ARHGEF28Q8N1W1 1705 aaKnown RBP12.79□□□□□ -0.36
PKP1-201ENST00000263946 OR52Z1P0C646 297 aa12.79□□□□□ -0.36
PKP1-201ENST00000263946 ATP2A2P16615 1042 aaKnown RBP12.79□□□□□ -0.36
PKP1-201ENST00000263946 DBNDD1Q9H9R9 158 aa12.79□□□□□ -0.36
PKP1-201ENST00000263946 DNM3Q9UQ16 869 aa12.79□□□□□ -0.36
PKP1-201ENST00000263946 ATP2C2O75185 946 aa12.79□□□□□ -0.36
PKP1-201ENST00000263946 TDRD7Q8NHU6 1098 aaKnown RBP12.79□□□□□ -0.36
PKP1-201ENST00000263946 UTYO14607 1347 aa12.79□□□□□ -0.36
PKP1-201ENST00000263946 EBAG9O00559 213 aa12.79□□□□□ -0.36
PKP1-201ENST00000263946 RFX5P48382 616 aaPredicted RBP12.79□□□□□ -0.36
PKP1-201ENST00000263946 MB21D2Q8IYB1 491 aaPredicted RBP12.79□□□□□ -0.36
PKP1-201ENST00000263946 BRIP1Q9BX63 1249 aa12.79□□□□□ -0.36
PKP1-201ENST00000263946 PICK1Q9NRD5 415 aa12.79□□□□□ -0.36
PKP1-201ENST00000263946 TBC1D7Q9P0N9 293 aa12.79□□□□□ -0.36
PKP1-201ENST00000263946 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.78□□□□□ -0.36
PKP1-201ENST00000263946 CPDO75976 1380 aa12.78□□□□□ -0.36
PKP1-201ENST00000263946 RIOK3O14730 519 aaKnown RBP12.78□□□□□ -0.36
PKP1-201ENST00000263946 TRAPPC10P48553 1259 aa12.78□□□□□ -0.36
PKP1-201ENST00000263946 LACTBP83111 547 aaPredicted RBP12.78□□□□□ -0.36
PKP1-201ENST00000263946 STOX1Q6ZVD7 989 aa12.78□□□□□ -0.36
PKP1-201ENST00000263946 CYB5R4Q7L1T6 521 aa12.78□□□□□ -0.36
PKP1-201ENST00000263946 STAG1Q8WVM7 1258 aa12.78□□□□□ -0.36
PKP1-201ENST00000263946 GOLGA1Q92805 767 aa12.78□□□□□ -0.36
PKP1-201ENST00000263946 KAZALD1Q96I82 304 aa12.78□□□□□ -0.36
PKP1-201ENST00000263946 CCDC17Q96LX7 622 aa12.78□□□□□ -0.36
PKP1-201ENST00000263946 RSPH14Q9UHP6 348 aa12.78□□□□□ -0.36
PKP1-201ENST00000263946 PCDHA12Q9UN75 941 aa12.78□□□□□ -0.36
PKP1-201ENST00000263946 RAPGEF1Q13905 1077 aa12.78□□□□□ -0.36
PKP1-201ENST00000263946 MCM6Q14566 821 aa12.78□□□□□ -0.36
PKP1-201ENST00000263946 NSMFQ6X4W1 530 aa12.78□□□□□ -0.36
PKP1-201ENST00000263946 CLEC17AQ6ZS10 378 aa12.78□□□□□ -0.36
PKP1-201ENST00000263946 RPAP1Q9BWH6 1393 aaPredicted RBP12.78□□□□□ -0.36
PKP1-201ENST00000263946 MAP2P11137 1827 aaKnown RBP12.78□□□□□ -0.36
PKP1-201ENST00000263946 A0A1B0GUA9 196 aa12.78□□□□□ -0.36
PKP1-201ENST00000263946 CIB2O75838 187 aa12.78□□□□□ -0.36
PKP1-201ENST00000263946 CSF1RP07333 972 aa12.78□□□□□ -0.36
PKP1-201ENST00000263946 IRX3P78415 501 aaPredicted RBP12.78□□□□□ -0.36
PKP1-201ENST00000263946 SLFN13Q68D06 897 aa12.78□□□□□ -0.36
PKP1-201ENST00000263946 OTUD6BQ8N6M0 293 aa12.78□□□□□ -0.36
PKP1-201ENST00000263946 JAKMIP2Q96AA8 810 aa12.78□□□□□ -0.36
PKP1-201ENST00000263946 KIFC2Q96AC6 838 aa12.78□□□□□ -0.36
PKP1-201ENST00000263946 VCX3BQ9H321 246 aa12.78□□□□□ -0.36
PKP1-201ENST00000263946 TCP10L2B9ZVM9 353 aa12.77□□□□□ -0.36
PKP1-201ENST00000263946 DNAJC21Q5F1R6 531 aaKnown RBP12.77□□□□□ -0.36
PKP1-201ENST00000263946 C11orf57Q6ZUT1 292 aaPredicted RBP12.77□□□□□ -0.36
PKP1-201ENST00000263946 SMIM5Q71RC9 77 aa12.77□□□□□ -0.36
PKP1-201ENST00000263946 CHURC1Q8WUH1 139 aa12.77□□□□□ -0.36
PKP1-201ENST00000263946 CAPZA3Q96KX2 299 aa12.77□□□□□ -0.36
PKP1-201ENST00000263946 PAIP2Q9BPZ3 127 aaKnown RBP12.77□□□□□ -0.36
PKP1-201ENST00000263946 NEDD4P46934 1319 aa12.77□□□□□ -0.36
PKP1-201ENST00000263946 ADKP55263 362 aaKnown RBP12.77□□□□□ -0.36
PKP1-201ENST00000263946 NKX1-1Q15270 411 aaPredicted RBP12.77□□□□□ -0.36
PKP1-201ENST00000263946 NELFCDQ8IXH7 590 aa12.77□□□□□ -0.36
PKP1-201ENST00000263946 CCDC63Q8NA47 563 aa12.77□□□□□ -0.36
PKP1-201ENST00000263946 MARCH10Q8NA82 808 aaPredicted RBP12.77□□□□□ -0.36
PKP1-201ENST00000263946 PRPF31Q8WWY3 499 aaKnown RBP12.77□□□□□ -0.36
PKP1-201ENST00000263946 SYNCQ9H7C4 482 aa12.77□□□□□ -0.36
PKP1-201ENST00000263946 PCDHA1Q9Y5I3 950 aa12.77□□□□□ -0.36
PKP1-201ENST00000263946 USP17L3A6NCW0 530 aa12.77□□□□□ -0.37
PKP1-201ENST00000263946 USP17L4A6NCW7 530 aa12.77□□□□□ -0.37
PKP1-201ENST00000263946 ZNF500O60304 480 aaPredicted RBP12.77□□□□□ -0.37
PKP1-201ENST00000263946 PHACTR2O75167 634 aa12.77□□□□□ -0.37
PKP1-201ENST00000263946 CYP26C1Q6V0L0 522 aa12.77□□□□□ -0.37
PKP1-201ENST00000263946 USP17L1Q7RTZ2 530 aa12.77□□□□□ -0.37
PKP1-201ENST00000263946 TMTC1Q8IUR5 882 aa12.77□□□□□ -0.37
PKP1-201ENST00000263946 NT5C3AQ9H0P0 336 aa12.77□□□□□ -0.37
PKP1-201ENST00000263946 PRPF3O43395 683 aaKnown RBP12.77□□□□□ -0.37
PKP1-201ENST00000263946 MMP10P09238 476 aa12.77□□□□□ -0.37
PKP1-201ENST00000263946 ERCC6LQ2NKX8 1250 aa12.77□□□□□ -0.37
PKP1-201ENST00000263946 ZNF34Q8IZ26 560 aa12.77□□□□□ -0.37
PKP1-201ENST00000263946 CACNA2D3Q8IZS8 1091 aa12.77□□□□□ -0.37
PKP1-201ENST00000263946 ARHGEF35A5YM69 484 aa12.76□□□□□ -0.37
PKP1-201ENST00000263946 GSG1L2A8MUP6 293 aa12.76□□□□□ -0.37
PKP1-201ENST00000263946 B4DLN1 442 aa12.76□□□□□ -0.37
PKP1-201ENST00000263946 LONP1P36776 959 aaKnown RBP12.76□□□□□ -0.37
PKP1-201ENST00000263946 ALX1Q15699 326 aa12.76□□□□□ -0.37
PKP1-201ENST00000263946 RAB3IPQ96QF0 476 aaPredicted RBP12.76□□□□□ -0.37
PKP1-201ENST00000263946 ABCC12Q96J65 1359 aa12.76□□□□□ -0.37
PKP1-201ENST00000263946 AFF2P51816 1311 aa12.76□□□□□ -0.37
PKP1-201ENST00000263946 GTPBP6O43824 516 aaPredicted RBP12.76□□□□□ -0.37
PKP1-201ENST00000263946 EPB41P11171 864 aaKnown RBP12.76□□□□□ -0.37
PKP1-201ENST00000263946 GPATCH4Q5T3I0 446 aaKnown RBP12.76□□□□□ -0.37
PKP1-201ENST00000263946 USP17L2Q6R6M4 530 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms