RNA–Protein interactions for RNA: ENST00000262768.11

TIMP2-201, Transcript of TIMP metallopeptidase inhibitor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP2, Length 3,652 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP2-201ENST00000262768 SP4Q02446 784 aa17.05■□□□□ 0.32
TIMP2-201ENST00000262768 DGKHQ86XP1 1220 aa17.05■□□□□ 0.32
TIMP2-201ENST00000262768 SNX29Q8TEQ0 813 aa17.05■□□□□ 0.32
TIMP2-201ENST00000262768 ZNF277Q9NRM2 450 aaPredicted RBP17.05■□□□□ 0.32
TIMP2-201ENST00000262768 TRIM49BA6NDI0 452 aa17.04■□□□□ 0.32
TIMP2-201ENST00000262768 ADAMTS3O15072 1205 aa17.04■□□□□ 0.32
TIMP2-201ENST00000262768 CRKP46108 304 aa17.04■□□□□ 0.32
TIMP2-201ENST00000262768 NELFCDQ8IXH7 590 aa17.04■□□□□ 0.32
TIMP2-201ENST00000262768 MLKLQ8NB16 471 aa17.04■□□□□ 0.32
TIMP2-201ENST00000262768 NELFBQ8WX92 580 aa17.04■□□□□ 0.32
TIMP2-201ENST00000262768 KIFC2Q96AC6 838 aa17.04■□□□□ 0.32
TIMP2-201ENST00000262768 MAP3K14Q99558 947 aa17.04■□□□□ 0.32
TIMP2-201ENST00000262768 DEF6Q9H4E7 631 aa17.04■□□□□ 0.32
TIMP2-201ENST00000262768 DDX39AO00148 427 aaKnown RBP17.04■□□□□ 0.32
TIMP2-201ENST00000262768 NPR1P16066 1061 aa17.04■□□□□ 0.32
TIMP2-201ENST00000262768 SEPT2Q15019 361 aa17.04■□□□□ 0.32
TIMP2-201ENST00000262768 CALCRLQ16602 461 aa17.04■□□□□ 0.32
TIMP2-201ENST00000262768 SHROOM1Q2M3G4 852 aaPredicted RBP17.04■□□□□ 0.32
TIMP2-201ENST00000262768 TEX35Q5T0J7 233 aa17.04■□□□□ 0.32
TIMP2-201ENST00000262768 CCDC150Q8NCX0 1101 aa17.04■□□□□ 0.32
TIMP2-201ENST00000262768 DRC1Q96MC2 740 aa17.04■□□□□ 0.32
TIMP2-201ENST00000262768 TMEM60Q9H2L4 133 aa17.04■□□□□ 0.32
TIMP2-201ENST00000262768 CYP4A11Q02928 519 aa17.03■□□□□ 0.32
TIMP2-201ENST00000262768 TCERG1LQ5VWI1 586 aa17.03■□□□□ 0.32
TIMP2-201ENST00000262768 KRT79Q5XKE5 535 aa17.03■□□□□ 0.32
TIMP2-201ENST00000262768 MRFAP1L1Q96HT8 127 aa17.03■□□□□ 0.32
TIMP2-201ENST00000262768 BAG1Q99933 345 aaPredicted RBP17.03■□□□□ 0.32
TIMP2-201ENST00000262768 PCDHA1Q9Y5I3 950 aa17.03■□□□□ 0.32
TIMP2-201ENST00000262768 CNTNAP5Q8WYK1 1306 aa17.03■□□□□ 0.32
TIMP2-201ENST00000262768 POTEMA6NI47 508 aa17.03■□□□□ 0.32
TIMP2-201ENST00000262768 USP17L10C9JJH3 530 aa17.03■□□□□ 0.32
TIMP2-201ENST00000262768 HOXA13P31271 388 aaPredicted RBP17.03■□□□□ 0.32
TIMP2-201ENST00000262768 ICA1Q05084 483 aa17.03■□□□□ 0.32
TIMP2-201ENST00000262768 LRRC41Q15345 812 aa17.03■□□□□ 0.32
TIMP2-201ENST00000262768 EZH2Q15910 746 aaKnown RBP17.03■□□□□ 0.32
TIMP2-201ENST00000262768 PLA2G4DQ86XP0 818 aa17.03■□□□□ 0.32
TIMP2-201ENST00000262768 PHF20Q9BVI0 1012 aa17.03■□□□□ 0.32
TIMP2-201ENST00000262768 SAMM50Q9Y512 469 aa17.03■□□□□ 0.32
TIMP2-201ENST00000262768 ADRA2BP18089 450 aa17.03■□□□□ 0.32
TIMP2-201ENST00000262768 PPP4R3BQ5MIZ7 849 aa17.03■□□□□ 0.32
TIMP2-201ENST00000262768 TICAM2Q86XR7 235 aa17.03■□□□□ 0.32
TIMP2-201ENST00000262768 ZFPM1Q8IX07 1006 aa17.03■□□□□ 0.32
TIMP2-201ENST00000262768 SRRTQ9BXP5 876 aaKnown RBP17.03■□□□□ 0.32
TIMP2-201ENST00000262768 FAM205AQ6ZU69 1335 aa17.03■□□□□ 0.32
TIMP2-201ENST00000262768 PSMA7O14818 248 aa17.02■□□□□ 0.32
TIMP2-201ENST00000262768 TYW1BQ6NUM6 668 aa17.02■□□□□ 0.32
TIMP2-201ENST00000262768 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.02■□□□□ 0.32
TIMP2-201ENST00000262768 MASTLQ96GX5 879 aa17.02■□□□□ 0.32
TIMP2-201ENST00000262768 COA1Q9GZY4 146 aa17.02■□□□□ 0.32
TIMP2-201ENST00000262768 ORC4O43929 436 aa17.02■□□□□ 0.32
TIMP2-201ENST00000262768 SLFN14P0C7P3 912 aa17.02■□□□□ 0.32
TIMP2-201ENST00000262768 SLFN13Q68D06 897 aa17.02■□□□□ 0.32
TIMP2-201ENST00000262768 NEK8Q86SG6 692 aa17.02■□□□□ 0.32
TIMP2-201ENST00000262768 RAB34Q9BZG1 259 aa17.02■□□□□ 0.32
TIMP2-201ENST00000262768 PSTPIP2Q9H939 334 aa17.02■□□□□ 0.32
TIMP2-201ENST00000262768 STK36Q9NRP7 1315 aa17.02■□□□□ 0.32
TIMP2-201ENST00000262768 SPDYE3A6NKU9 549 aa17.02■□□□□ 0.31
TIMP2-201ENST00000262768 TEX33O43247 280 aa17.02■□□□□ 0.31
TIMP2-201ENST00000262768 ECE2O60344 883 aa17.02■□□□□ 0.31
TIMP2-201ENST00000262768 KIF4BQ2VIQ3 1234 aa17.02■□□□□ 0.31
TIMP2-201ENST00000262768 TBC1D10BQ4KMP7 808 aaPredicted RBP17.02■□□□□ 0.31
TIMP2-201ENST00000262768 RTFDC1Q9BY42 306 aaPredicted RBP17.02■□□□□ 0.31
TIMP2-201ENST00000262768 POLRMTO00411 1230 aaKnown RBP17.01■□□□□ 0.31
TIMP2-201ENST00000262768 SORBS3O60504 671 aa17.01■□□□□ 0.31
TIMP2-201ENST00000262768 GH2P01242 217 aa17.01■□□□□ 0.31
TIMP2-201ENST00000262768 PAK1Q13153 545 aa17.01■□□□□ 0.31
TIMP2-201ENST00000262768 BCS1LQ9Y276 419 aa17.01■□□□□ 0.31
TIMP2-201ENST00000262768 BCL9LQ86UU0 1499 aa17.01■□□□□ 0.31
TIMP2-201ENST00000262768 DLGAP5Q15398 846 aa17.01■□□□□ 0.31
TIMP2-201ENST00000262768 PRR16Q569H4 304 aa17.01■□□□□ 0.31
TIMP2-201ENST00000262768 CSGALNACT2Q8N6G5 542 aa17.01■□□□□ 0.31
TIMP2-201ENST00000262768 DDX4Q9NQI0 724 aaKnown RBP17.01■□□□□ 0.31
TIMP2-201ENST00000262768 TDP2O95551 362 aa17.01■□□□□ 0.31
TIMP2-201ENST00000262768 TTLL1O95922 423 aa17.01■□□□□ 0.31
TIMP2-201ENST00000262768 RCSD1Q6JBY9 416 aa17.01■□□□□ 0.31
TIMP2-201ENST00000262768 ATP6V0A2Q9Y487 856 aa17.01■□□□□ 0.31
TIMP2-201ENST00000262768 MEIS1O00470 390 aa17■□□□□ 0.31
TIMP2-201ENST00000262768 OR52Z1P0C646 297 aa17■□□□□ 0.31
TIMP2-201ENST00000262768 MRPL12P52815 198 aaKnown RBP17■□□□□ 0.31
TIMP2-201ENST00000262768 SLC27A3Q5K4L6 730 aa17■□□□□ 0.31
TIMP2-201ENST00000262768 NCAPH2Q6IBW4 605 aa17■□□□□ 0.31
TIMP2-201ENST00000262768 CDC42EP5Q6NZY7 148 aa17■□□□□ 0.31
TIMP2-201ENST00000262768 KIAA1328Q86T90 577 aa17■□□□□ 0.31
TIMP2-201ENST00000262768 A0A087X0B3 334 aa17■□□□□ 0.31
TIMP2-201ENST00000262768 PCP11498 1178 aaKnown RBP17■□□□□ 0.31
TIMP2-201ENST00000262768 POTEDQ86YR6 584 aa17■□□□□ 0.31
TIMP2-201ENST00000262768 UBXN4Q92575 508 aa17■□□□□ 0.31
TIMP2-201ENST00000262768 PDGFDQ9GZP0 370 aaPredicted RBP17■□□□□ 0.31
TIMP2-201ENST00000262768 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17■□□□□ 0.316e-9■■■□□ 16.2
TIMP2-201ENST00000262768 ZNHIT6Q9NWK9 470 aaKnown RBP17■□□□□ 0.31
TIMP2-201ENST00000262768 RPN1P04843 607 aaKnown RBP17■□□□□ 0.31
TIMP2-201ENST00000262768 PLCG1P19174 1290 aa17■□□□□ 0.31
TIMP2-201ENST00000262768 CCDC40Q4G0X9 1142 aa17■□□□□ 0.31
TIMP2-201ENST00000262768 KRT25Q7Z3Z0 450 aa16.99■□□□□ 0.31
TIMP2-201ENST00000262768 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.99■□□□□ 0.31
TIMP2-201ENST00000262768 ANAPC4Q9UJX5 808 aa16.99■□□□□ 0.31
TIMP2-201ENST00000262768 STRCQ7RTU9 1775 aa16.99■□□□□ 0.31
TIMP2-201ENST00000262768 CYTH3O43739 400 aa16.99■□□□□ 0.31
TIMP2-201ENST00000262768 TDRD12Q587J7 1177 aaKnown RBP16.99■□□□□ 0.31
TIMP2-201ENST00000262768 SLC30A10Q6XR72 485 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms